Salvelinus fontinalis (brook trout): 129816682
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Entry
129816682 CDS
T11136
Name
(RefSeq) transcription factor Sox-21-B-like
KO
K09267
transcription factor SOX1/3/14/21 (SOX group B)
Organism
sfon Salvelinus fontinalis (brook trout)
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sfon03000
]
129816682
Transcription factors [BR:
sfon03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
129816682
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
SOXp
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
129816682
NCBI-ProteinID:
XP_055727425
LinkDB
All DBs
Position
19:complement(37337286..37338959)
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AA seq
239 aa
AA seq
DB search
MSKPMDHVKRPMNAFMVWSRAQRRKMAQENPKMHNSEISKRLGAEWKLLTESEKRPFIDE
AKRLRAMHMKEHPDYKYRPRRKPKTLMKKDKFAFPVPYNLGEHDALKVSGLSHGALSEHL
LGNPDKAAAAAAAARVFFNPSMSTNPYSFFELGSKMSELSSPSFPYPSLGYPGGTAFSGT
GGVGGTHTHSHPAPGNPGYMISCNCTGWPSAGLQPPLAYILLPGMGKPQLDYPAYAAAL
NT seq
720 nt
NT seq
+upstream
nt +downstream
nt
atgtctaaaccaatggatcacgtaaaacgaccgatgaatgccttcatggtttggtccaga
gcgcagagaagaaaaatggctcaggagaacccaaaaatgcacaactccgaaatcagcaaa
agattgggagcggagtggaaacttctcactgagtcggagaaaaggccattcattgacgaa
gcaaaacgactgagagccatgcacatgaaggaacaccctgactataaatacagacctagg
cggaagccaaagactctgatgaaaaaagacaagtttgccttcccagtgccctacaatctt
ggggagcacgacgcgctaaaagttagcggtttatctcatggagcactttccgaacaccta
ttggggaaccccgacaaagcggcagcggcggccgcagcagcgagagtctttttcaacccg
tccatgtccacgaacccctattcgttttttgagctcggatcgaagatgtcagagctatcc
tcgccctcgtttccttacccatctctgggctaccctggtggcacggctttctctggaact
ggcggtgtcggtggaactcacactcactctcatccagcccccggcaacccaggctacatg
atctcctgtaactgtacgggctggccctctgcgggtctccagccaccgttggcctacatc
ctactccccgggatgggcaaacctcaacttgactaccctgcatatgcagcggcattatga
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