Salvelinus fontinalis (brook trout): 129816916
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Entry
129816916 CDS
T11136
Symbol
tspearb
Name
(RefSeq) thrombospondin-type laminin G domain and EAR repeat-containing protein
KO
K24437
thrombospondin-type laminin G domain and EAR repeat-containing protein
Organism
sfon Salvelinus fontinalis (brook trout)
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
sfon03037
]
129816916 (tspearb)
04990 Domain-containing proteins not elsewhere classified [BR:
sfon04990
]
129816916 (tspearb)
Cilium and associated proteins [BR:
sfon03037
]
Other cilia and associated proteins
Stereociliary proteins
129816916 (tspearb)
Domain-containing proteins not elsewhere classified [BR:
sfon04990
]
Thrombospondin domain-containing proteins
Other thrombospondin domain-containing proteins
129816916 (tspearb)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EPTP
Laminin_G_2
Laminin_G_1
Motif
Other DBs
NCBI-GeneID:
129816916
NCBI-ProteinID:
XP_055727868
LinkDB
All DBs
Position
19:49797007..49849115
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AA seq
680 aa
AA seq
DB search
MGREREGALMSELLLLVCMTLLCSGMAGGQAAGGWRPCTDLLPLDFLSRVLPPGGEPPLP
EVHMVQSRGARGLQLAGYQEALSFPASQLFTNCDHFPSEFSFVVTLKIPRLANKRNEYIF
SLVEEESDRLLVGLLVSQERLHFLFQGPTGRKRITFRAVRLADNHWHTVVVAVTGRYATL
RVDCGTALELVFEKPFPSDLCTAHSRFYIGSRRRWKGLFSGLLRQLVLLPGSDATSRVCP
SSDPRLAVLAVPQVLLTMPITPTGNDIVPLYPYEAEVRITPGTQPPCARAEQGQLWFNTL
KKGLFLCDGRLWLPLLQEKERLDYVEDYQDLYTNSETFDIEVFHIPSQGLFAATANRETK
PGSGIYKWVDGKFQVYQNIITYEARAWKFFTVGNKMFLAVANSKGQPGGEWEESVIYKWS
SRKLMFLPYQTIETHSALDWEAFSIQEQHFLAVANHRRGDNNHNIDSVIYRWNPGTKVFE
VNQTLETSGAYDWEFFSVGPYHFLVVANTFDGISTAINSTIYIWLGGMFRPFQYIKTVGA
TDWEMFQIGDRYFLAVANGQKLNERGPSHYNINSTIYELNMITQTFIKFQDIVTNSAVDW
EFFSVGEEKFLVVANSHDGSSYSLNSVIYRWQGYEGFVPIHRLPTIGCTDWEYFNTTAGS
FLVYSSATSPLSKVFRLKTY
NT seq
2043 nt
NT seq
+upstream
nt +downstream
nt
atgggcagagagagagaaggagccctgatgtctgaactcctgctgctggtctgtatgact
ctcctctgctctgggatggctgggggacaggctgctggaggatggagaccatgcacagat
ctgttacctttggacttcctgtcgcgggtcttaccacctggcggggagccccccctgccg
gaagtgcacatggtccagtccaggggggcccggggcctgcagctagccggctatcaggaa
gccctcagcttccccgcctcgcagctcttcaccaactgtgaccacttcccttctgagttc
tccttcgtggtcacgctcaagatcccacgccttgccaacaagaggaacgagtacatcttc
tcgttggtggaggaggagtcagaccggctgctggttggtctacttgtctctcaggagagg
ctccacttcctgttccagggcccgacaggcaggaaacggatcacgtttagggcggtgcgg
ctggcggacaaccactggcacacagtggtggtggccgtcaccgggcgctatgctacactc
agagtggactgtggtacggccctggagctggtctttgagaagccttttcccagtgatctc
tgcaccgcccactccaggttctacatcggcagcaggaggcggtggaaaggactgttctcc
ggtttgctgcgacagctggtcctgttgcctgggtcagatgctacctctcgagtttgtccc
tcttcagaccccagactggcagtcctcgcagtccctcaggtcctgctcaccatgcccatc
acacccactgggaatgacatagtccccctgtatccttatgaggcggaagtgcgtataacc
ccggggacccagcctccctgtgccagggcagagcaaggtcagctgtggtttaacacactg
aagaaaggcctgttcctgtgtgatggacggctgtggctgcctctgctgcaagagaaagag
cgtctggactacgttgaagattaccaagacctttacaccaactcggagacgttcgacatc
gaagtgtttcacatcccctcccaaggactgttcgctgccacagccaatcgcgagaccaag
ccgggctctgggatctacaagtgggtggatgggaagtttcaagtgtatcagaacatcatc
acctatgaagcacgggcatggaagttctttactgtgggcaacaagatgttcctagcagtg
gctaactccaagggccagcccggcggggagtgggaggagtcagtgatctacaaatggagc
agcaggaagttaatgttcctaccctatcagaccatagagacacacagtgctctggactgg
gaggccttcagcatacaggaacaacatttcctggctgtggccaatcacagacgaggtgac
aacaatcacaacatcgacagtgtgatttaccggtggaatccgggcaccaaggtgtttgag
gtgaatcagaccctcgagacgtctggggcctacgactgggagttcttttccgtgggtcca
taccacttcctggtggtggccaacaccttcgatggaatatccaccgccatcaactccacc
atatacatctggctgggaggaatgttccggccctttcagtacatcaagacggtgggagcg
acagactgggagatgttccagataggggatcggtacttcctggcggtggctaacggccag
aaactgaacgagagaggccctagtcactacaacatcaactcaaccatctacgaactgaat
atgatcacacagaccttcattaagttccaggacatcgtcacaaacagtgcggtggactgg
gaattcttctcggtgggtgaagagaagttccttgttgtggcaaattctcacgatggatcc
tcgtattctttaaacagtgttatatacaggtggcagggatatgagggctttgtcccgatc
caccggctgccgaccatcggctgtacggactgggaatatttcaataccacggcaggatcc
tttctcgtctactctagtgccacctctcccctgtctaaagtcttccgactaaagacatac
tga
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