Salvelinus fontinalis (brook trout): 129817125
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Entry
129817125 CDS
T11136
Name
(RefSeq) integrin beta-4-like
KO
K06525
integrin beta 4
Organism
sfon Salvelinus fontinalis (brook trout)
Pathway
sfon04382
Cornified envelope formation
sfon04510
Focal adhesion
sfon04512
ECM-receptor interaction
sfon04518
Integrin signaling
sfon04810
Regulation of actin cytoskeleton
sfon04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
129817125
04518 Integrin signaling
129817125
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
129817125
09142 Cell motility
04820 Cytoskeleton in muscle cells
129817125
04810 Regulation of actin cytoskeleton
129817125
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
129817125
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sfon04147
]
129817125
04515 Cell adhesion molecules [BR:
sfon04515
]
129817125
04090 CD molecules [BR:
sfon04090
]
129817125
Exosome [BR:
sfon04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
129817125
Exosomal proteins of bladder cancer cells
129817125
Cell adhesion molecules [BR:
sfon04515
]
Integrins
Integrin beta subunits
129817125
CD molecules [BR:
sfon04090
]
Proteins
129817125
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Integrin_beta
fn3
Calx-beta
Integrin_B_tail
Pur_ac_phosph_N
EGF_Teneurin
PSI_integrin
FN3_DSCAM-DSCAML_C
I-EGF_1
EGF_integrin
EGF_2
EGF_TEN
Motif
Other DBs
NCBI-GeneID:
129817125
NCBI-ProteinID:
XP_055728072
LinkDB
All DBs
Position
1:12900894..12964117
Genome browser
AA seq
2019 aa
AA seq
DB search
MGRWTLHLLAGVVLAVLTASSYAEKVNHCLAARANTCSACIQSGKGCAYCPDEMFDGPRC
DLLENIIDHGCNGAVTAEGSVSMEKNQKIDMLMKRSQVAPQDMSMTLLPGEEREIDMEVF
EPAKGPLDLYILMDFSNSMKDDLDNLKRMGAELADLVGKLSDDYTIGFGKFVDKVVEPQT
DMRPTKLAQPWPNSDPPFSFRNVITLTSDLQSFTQKLQKERISGNLDAPEGGFDAILQAT
VCGEKIGWRDHATHLLVFSTESAFHYEGDGANVLAGIMPRNDEQCHLDPDGKYTEDTRQD
YPSVPTLVRLLGKHNIIPIFAVTNHSFTYYEKLHEYFPIAELGLLQEDSANILNIMEKAF
ENIRSKISIRAEDRPKAIEAQVLSYSGSVAQAGTFKVKPGQIGKFKVRVKASEMVGEQHV
CSLEQGDKKGKMRVKPTTFSTALNINAEVLCKTCDCEKNPFPNAVRCTGHGDLVCGKCKC
NDGWLGPFCNCSASASTDPGTSCRGPGVEEPCSGRGDCLCGTCVCYNTDQYEGPLCQFDK
SQCQRYGGFLCNDRGRCFMGQCACAEGWEGPACECPMSNQTCLDTKGGICNGRGVCKCGR
CECQDSGLAMTPTCEANFQAQLGMCEDKRSCVQCQAWKTGEKKDSDKCDQCQFKVVMVEE
LRENKEVIEACSFRDEDDDCTYHYTVDYPEDQNVKELEVQVLKKKDCPPAGFLWLIPLIM
FLMLLLGLLSLCCWKYCACCKSCLALLPCCGRGRTVGFKENQYMLRQSMLTSDHLDTPLV
RTGPPKSTDVVRWKITDNVHRSPNNPLAQVQPNPKETIQFPLSLRLNRLFTDSLSRSDAR
DTELLRREVDDNLNEVYKQVPGTQRVQNTTFRLQRNAGKRADHAIVDTVLSAPRSSYPNI
VKLTEKNVQSGNFQDLKVVPGYYTVATDREAAGAVEFQEGVEMVDVHVPLFVKEEDDDKK
QLQVEAVDVPLGIAEIGKRFVSITIIKEHAKSVMSFLQPSYTYSRQDKVANIPITREIIE
DGHAQVSYRTRDLTAKDKKDYVTVDGELSYGPGETQQTVPVRLLEMGEGDGLLKDTQVKQ
FVMDLSNPRQGAKLGRYPRTTVTITDKPEPSVVMFMKSTQNFSTADPTYSIPVVRTRNKE
GPATVHWRTRNAKRFELSGPLKFGPGETDKNIVIDPRSHPGPVKPESFQLELFDPSTKAV
VGERKTTMVTITDGGLPDNAQMEKSAGFINQTATSPGGRLNSPTNVKAKATGPRSIRLNW
DPVGKSLGYKVKHWIYGDPEADAPPAMNVKTTHADLTNLYPYCDYETKVCGYNALGDGNY
SDMVPCKTLEDVPSEPGRLAFNVISPTVTQVSWAEPAETNGVITAYEVLYTPINDDTKPM
GAAKKVKIDNPKKRMLLIENLQSAQTYCYQVRAKNSVGWGPFKEATINLASQPTRPMSIP
IIPDIPIVDAEAGDEYDGYLMYSSEVMRSPTDSKRPSVSDEEPMNGRLEQNFLFPGGNNS
MSRNMSSSSYSQVSPMSTLSSSHRGGAGGSMSMESTTTYLSGQGGNSLSRTQVIGGGTRT
ENVVMRKRSENRGYYEYDDNIRDSIIIGDLSSGLSGYTDGQSTYGFSPTQTQSQYDYGMS
QAFRARTQSEDVNDALLNLDRVLHDARLAPGVPDTPTRLVFSALGPTALKISWQEPHCER
DVLGYCVLYQLLNGGDVKRINMSSPADNSVVVQDLLPNHSYLFKVKAQSQEGWGPEREGV
ITIESAVDPNSPLSPMPGSPFTLSTPSAPGPLVFTALSPEALQLSWEKPRKPNGDILGYV
VTCEHLHGGGDMRSFQVSGDSAETSLTVPDLSENMPYKFKVQARTTQGFGPEREGIITIE
SQDDGGTSQLGGLGGMSQLGGLGGMTQLGGLGGTSQLGGQGGMSQLGGLGGMSQLGGLGG
MSQLGGLGGTSQYSSQSLTKRDVYQLPTEGSTHTNVTHTMINDPYYSGDGMMMVGKTTQH
TETSGMVTRHVTKEVVQRSMQVAGTSSVTKKVERSFYET
NT seq
6060 nt
NT seq
+upstream
nt +downstream
nt
atggggagatggacgttacatctcttggcgggggttgtacttgctgtcctcacggccagt
agctacgctgaaaaagtaaaccactgtctggctgcaagggcgaacacctgttcagcatgt
atccagtcagggaagggctgtgcctactgcccagacgagatgtttgatggaccccgctgt
gaccttctggagaacatcatagaccacggctgtaatggcgcggtgacggccgaaggcagt
gtgtcaatggagaaaaaccagaagattgacatgttgatgaagcgctctcaggtagccccc
caggatatgtccatgactctgctgccaggggaggagagggagattgacatggaggtgttt
gaaccagcgaaaggacctctggacctctatattctcatggacttctccaactccatgaaa
gatgatttggacaacctcaaaaggatgggtgctgagctggctgacttggtggggaagctg
tctgatgattacaccatcggtttcggcaaatttgtggacaaggtggtggagccccagaca
gacatgagaccgaccaaactggcccagccgtggcccaacagcgaccctcccttctcgttc
cgaaatgtgatcactctgacctctgacctgcagtccttcacccagaagctgcagaaggag
aggatctcaggcaacctggatgctccagaggggggcttcgacgccatactgcaggctaca
gtctgcggggaaaagatcggctggcgtgaccatgccacccacctcctggtcttctccacc
gagtcggccttccactacgagggtgacggtgccaacgtgctggctggcatcatgccacgc
aatgacgagcagtgccacctggaccccgatgggaaatacacggaggacaccaggcaggac
tacccctctgtgcccaccctggtccgcctgctgggcaaacacaacatcatccccatcttt
gccgtcacaaaccactccttcacctactatgagaagcttcatgagtatttccccatcgct
gagctgggcctgctccaggaagactctgctaacatcctcaatatcatggagaaagctttc
gagaatatccgttctaagatcagcatccgtgctgaggacagacctaaagctatagaagct
caggtcctgtcttacagtggcagtgttgcacaagccggaaccttcaaagtcaagcctggg
caaatagggaagtttaaggtgcgtgtcaaggccagtgagatggttggggagcaacatgtg
tgtagtctggagcaaggtgacaagaaggggaagatgagagtcaaaccgaccaccttcagc
acagctctaaacatcaacgctgaagtgctctgtaaaacctgcgactgtgagaagaatcca
tttccaaacgcagtgaggtgtacaggccacggagacctggtctgtgggaagtgcaagtgc
aacgacggctggctgggtccgttctgtaactgctctgccagcgcgtctacggatccgggc
acttcctgtcggggtcctggagtggaggagccgtgttctggccgaggagattgcctgtgt
ggaacgtgtgtttgttacaacacggaccagtacgagggacccctctgtcagtttgacaag
tcccagtgtcaacgatacggaggtttcctctgcaacgaccgtggtcgctgcttcatgggc
cagtgtgcgtgtgcagagggctgggagggaccggcctgtgagtgtcccatgagcaaccag
acctgtctggacactaaagggggcatctgtaacgggcggggtgtgtgtaagtgtggtcgt
tgtgagtgccaggactctggcctggccatgacccccacctgcgaggctaacttccaggcc
cagctggggatgtgtgaggacaagaggagctgtgtccagtgtcaggcctggaagaccggc
gagaagaaggacagcgacaagtgcgaccagtgccagttcaaagtggtcatggtggaagag
ctcagggaaaataaagaggtgattgaggcgtgtagtttccgtgacgaggatgacgactgt
acgtaccactacaccgtggactatcccgaggaccagaatgttaaggaactggaggtccag
gtgctcaagaagaaagactgtccccctgctggcttcctgtggttgatccctctcatcatg
ttcctcatgctactgctgggtctattgtcgctctgctgttggaagtactgcgcctgctgc
aagtcttgtcttgctttgctgccatgctgtggaagaggtcgtacggttggctttaaggaa
aatcagtacatgctccgccaatccatgctcacctctgaccacctagacacgcccctagtt
aggaccggcccacccaagagcaccgacgtggttcgttggaagatcaccgacaatgtccac
cgatcgcccaataatccgcttgcgcaggttcagcccaaccccaaagagacaatccagttc
cctctgtctctgcgtctgaacaggttgttcacagacagtctgtctcgctccgacgccaga
gacactgagttgctacgcagggaggttgatgacaacctgaatgaagtgtacaagcaggtt
cctggcacccagagagttcagaacaccacatttagattacagagaaatgctggtaaaaga
gctgaccacgccatcgtagacaccgttttgtccgcccctcgctccagctaccccaacatc
gtcaaactgactgagaaaaacgtccagtctggaaacttccaggatctcaaagtggtgccg
ggctactacacagtggccacagacagagaggcggctggtgccgtggagttccaggagggg
gtagagatggtggatgtgcacgtgccgctcttcgtcaaggaggaagatgatgataagaag
cagctgcaggtggaggcggtggacgttcctctgggcatcgctgagattgggaaacgcttc
gtcagcatcactatcatcaaagaacacgccaagagtgttatgtcgttcctccagccttcg
tacacctacagccgacaggacaaagtggctaacatccccattactagagagatcatagag
gatggacacgcacaggtcagctaccgcacccgagacctcaccgccaaggacaagaaggac
tatgtgacagtagatggggaactgtcctacgggccaggggagacccagcagactgtccct
gttcgtttgttggagatgggagagggagacggtctgctgaaggacacacaggtcaaacaa
tttgtcatggacctcagtaacccaagacagggtgcaaagctgggacgctaccccagaacc
accgtcaccatcactgacaaaccagagcccagtgtggtgatgtttatgaagagcacccag
aacttctccaccgccgacccaacctactccatccccgtggtccgcacccgcaataaggag
gggcccgccaccgtccactggaggacccgcaacgctaaacgcttcgagctgtccggcccc
ctaaagtttggtcccggggaaacagataagaacatcgtgatcgatccacgctctcaccct
ggcccggtgaaaccagagtccttccaactggaactgtttgaccccagtacgaaagctgtg
gtcggagagaggaagacgacgatggtcactattactgatggaggacttccagacaatgcc
cagatggagaagagtgcgggcttcatcaaccagacagccacgtctcctggtggtcgtctc
aactctcccaccaacgtgaaggccaaagccaccggcccccggagcatccgcctgaactgg
gatcccgtaggaaaatccctgggctacaaggtgaagcattggatctatggggatcctgag
gctgacgccccccctgcgatgaatgtgaagacaacccatgctgatctgaccaacctgtac
ccctattgtgactacgagacgaaggtgtgtggctacaacgccctgggagacggaaactac
agcgacatggtgccctgtaagaccctggaggatgtccccagtgagcccggtcgtctggcg
tttaacgtcatcagtccaactgtcactcaggtcagctgggcggagcctgccgagaccaat
ggtgtcatcaccgcctacgaggtcctctacacgcccatcaatgacgacacgaagccgatg
ggtgcagctaagaaggtgaagatagacaaccctaagaagaggatgttgctgattgagaac
ctgcagtcggcccagacttactgctatcaggtccgggctaagaacagcgtgggttggggt
cccttcaaagaagcgaccatcaacctggcctcccagcccaccagacccatgtccatccct
atcatcccagacatccctatagtggacgcggaggcgggtgatgagtacgacggctacctg
atgtacagcagtgaggtcatgagatcgccaacagactccaagagacccagcgtctcagac
gaagaaccaatgaacggcaggttggaacagaacttcctcttccccgggggaaataattcc
atgtcgcgcaacatgtcttcatccagctacagccaggtgtctcccatgtccaccctcagc
tccagccaccgagggggggccggggggtccatgtccatggagtccaccacaacatacctc
tctggacaaggaggaaactctctctcccgcactcaggtgattgggggcgggacgcgcacg
gagaatgttgtcatgaggaaacgatcagagaacagaggttactatgagtatgatgacaac
atccgagattccatcatcataggagacctgtccagtggattgtctggatacacagatggc
caaagtacgtatggcttcagtcccactcagacacagagtcagtacgactacggtatgtct
caggccttccgggccaggacccagtctgaggatgtcaacgatgcactactgaacctggac
agggtgctccacgacgctcgtttggcccctggggtccctgacacccccaccaggctggtg
ttctctgccctgggccccactgccctgaagatcagctggcaggagccccactgtgagagg
gatgttttagggtactgtgttctctaccagcttctcaacggaggcgatgtgaagcgtata
aacatgtccagccccgcagacaactccgtggtggtgcaggacctgctgcctaaccactcc
tacctgttcaaggtgaaggctcagagtcaggaaggttggggaccggagagggagggagtc
atcaccatagagtcagctgtcgaccccaacagcccactcagcccaatgccaggttctccc
ttcactctcagtacccccagtgctccaggccccctggtattcacagcgctgtcccccgag
gcactgcagctgagttgggagaaaccccgcaaacccaacggagacatcctgggctacgtg
gtcacctgtgaacatctgcacggaggaggtgacatgcgttccttccaggtgagcggtgac
agcgctgagaccagtctgacagttccggacctgagtgagaacatgccgtacaagttcaaa
gttcaggccaggacgacccagggcttcggccccgagagggagggcattatcaccatcgag
tctcaggatgacggcggtacgtctcaactaggaggcctaggcggtatgtctcaactagga
ggcctaggcggtatgactcaacttggaggtctaggcggtacgtctcaactaggaggccaa
ggcggtatgtctcaacttggaggcctaggcggtatgtctcaactaggaggcctaggcggt
atgtctcaactaggaggtctaggcggtacgtctcagtacagcagtcagtccttgaccaag
agagatgtgtaccaacttcctacagagggcagcacacacaccaacgtcacacacaccatg
atcaacgacccatactactcaggagatggtatgatgatggtggggaagacgacccagcac
acagagaccagcggcatggtgactcgtcatgtgacgaaggaggtggtgcagaggagcatg
caagtggccggcaccagcagcgtcaccaagaaggtcgagaggtcattctacgagacctga
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integrated database retrieval system
