KEGG   Salvelinus fontinalis (brook trout): 129817154
Entry
129817154         CDS       T11136                                 
Name
(RefSeq) syntaxin-binding protein 5-like isoform X1
  KO
K08518  syntaxin-binding protein 5
Organism
sfon  Salvelinus fontinalis (brook trout)
Brite
KEGG Orthology (KO) [BR:sfon00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:sfon04131]
    129817154
Membrane trafficking [BR:sfon04131]
 Exocytosis
  Small GTPases and associated proteins
   Rab associated proteins
    129817154
 SNARE
  VAMP, Ykt6, Sec22 (R)
   Tomosyn
    129817154
SSDB
Motif
Pfam: LLGL WDR55 WD40_CDC20-Fz Beta-prop_EML_2 WD40_WDHD1_1st ANAPC4_WD40 WD40 Beta-prop_IFT140_1st Beta-prop_HPS5 WD40_Prp19 Beta-prop_RIG_2nd Beta-prop_WDR19_1st Beta-prop_TEP1_2nd Beta-prop_WDR90_POC16_2nd EIF3I Beta-prop_NUP159_NUP214 Lgl_C KNTC1_N CFAP43_N Beta-prop_EML Beta-prop_Vps41 Beta-prop_VPS8 Beta-prop_WDR35_TULP_N VPS8_N Synaptobrevin WD40_like Beta-prop_IFT122_2nd
Other DBs
NCBI-GeneID: 129817154
NCBI-ProteinID: XP_055728083
LinkDB
Position
20:complement(3267538..3444563)
AA seq 1224 aa
MKKFNIRKVLDGLKEQASSSASSGQSGTQENNLMQETLQSENFQLCKTVRHGFPYQPSSM
AHDPVQKILAIGTQSGALRLFGRPGVECYCQHESGAAVISLQFLINEGALVSALADDSVH
LWNLRQKRPAILHSLKFNRERITFVHLPFQSKWLYIGTEKGNIHIVNVESFTLSGYVIMW
NKAIELSSKAHPGPVVHISDNPMDEGKLIIGYESGIVVLWDLKSKKADYRYTYDEAIHSV
AWHHEGKQFICSHSDGTLTIWNIKGQGKPFQTITPHGKQPKDGKKPEPCKPILKVEYKTT
RLGDPFMILSGGLSYDTVGRRPCLTVMHGKSTAVLEMDYPIVDFLTLCETPYPNDFQEPY
AVVVLLEKDLVVIDLAQNGYPIFENPYPLTIHESPVTCCEYYADCPVDLIPALYTVGSRQ
KRQGYSKKEWPISGGNWGLGTQSYPEIIITGHADGTVKFWDASAIMLQVLYKLKTAKVFE
KSRNNKEDKQNTEIVDEDPFAIQIMAWCPESRILCVAGVSANVIIYRFSKQEITTEVVQL
LEVRLQYEVNDMESPPEGGGGGDRGGGGDRDLPTPGTASPSPQTTGPPTHPSTSSNSSDG
VRDNVACLKYAPCTTTGSHTVLTIHTHSLSATKWAFGTHHLATHPQAIQLGGELPPPPPL
FLSLCLSLPLHLSLSIYRVRSSPLKQSPGYQVELVVQLVWVSGEPPQQITSLALNSSYGL
IVFGNSNGLAVVDYLQKTVLLNLGTVELYGSNDPYQRQPRSPRKTRQPSGGNGLCDINEG
SASEDRCKSPTSVLALNHQQFYNGSGGRGAKMSRKLSLPTELKPDLVLLSVCPPRGANPL
DHRDNSFSRSRSSSVTSIDKEAREAITSFHFCETFARKGDSTITPCLYVGTSLGTVLAVA
LNLPPAGEQRLLQPVIVLPSGTLGRLKGSILRMAFLDNTGTFLPPAFELWYEPNAVGADS
EERDKARKRRPVSVSPSTSQELQESQYAVVCSEKQAKVIALPSQNCIFKHSITETSFVLR
ADVVQMNIGNCVACFCANGHIMTLSLPGLRPLLDVNYLPLTDMRIARTFCFTNLGQAMYL
TSPTEIQRITYSQETCENLQEMLGELFTPVETPEAPNRGFFKGLFGGGATSLDREELFGE
TQAGKASRGLAQHIPGPQGLEGMKGAASGVVADLARARIALDERGQKLGELDERTAAMLA
SADSFGKHAHDMMLKCKDKKWYQF
NT seq 3675 nt   +upstreamnt  +downstreamnt
atgaagaagtttaacatcaggaaggtactggacggcctaaaggagcaagcgtcttcctcg
gcttcgtctggccagtcgggcacccaggagaacaatttgatgcaggagacccttcagtcc
gagaattttcaactctgcaagactgtccgtcatggcttcccctatcagccgtcgtccatg
gcccatgacccagtccagaagatcctggccattgggacccagagtggggccctcagactg
tttggtcgtccaggtgtggagtgctactgtcaacatgagagtggagccgctgtcatctcg
ctacagtttctcatcaacgagggggcgctggtgagtgctctggcagatgacagcgtgcac
ctttggaacctgaggcagaagaggcccgccatcctccactcactcaagttcaacagagag
aggatcacgttcgtccacctgcccttccaaagtaaatggctgtacatcggcacagagaaa
ggaaacatccacatcgtcaacgtggagtccttcacactctcaggctacgtcatcatgtgg
aacaaagccatcgaactatcctccaaggcccacccaggtcccgtggtccacataagtgac
aaccccatggatgagggaaagcttataattggatatgagtctgggatcgtggtcctgtgg
gatctgaaatcaaagaaggcagactaccggtacacgtatgacgaggcaatccactcggtt
gcctggcaccatgagggcaagcagtttatctgtagtcactcagacggaacgctcaccata
tggaacattaagggccagggcaagccatttcagacgatcaccccacacggaaaacagcct
aaggatggaaagaagccagagccttgcaaacccattctcaaagtggagtacaagaccact
agactgggagacccatttatgatcctgtctggaggtctgtcttatgacacggtgggtcgg
cggccatgtctgacggtgatgcatgggaagagtacagccgtgctggaaatggattacccc
atcgtagacttcctcacgctctgtgagacgccataccctaacgattttcaggaaccttat
gctgttgtggtccttctcgaaaaggatttagtggtgatcgaccttgcccaaaatggttac
cccatattcgagaacccctatccactgaccatccacgagtctcctgtgacctgctgtgag
tactatgctgactgccctgtggacctcatacctgcactttacactgttggctccagacag
aagcgacagggctacagcaaaaaggaatggcccataagtggtggtaactggggcctgggc
acacagagctaccctgagatcatcatcactgggcatgctgatgggactgtgaagttctgg
gatgcttctgcaataatgctccaggtactatacaagctgaagacggccaaggtgtttgag
aagagcaggaataataaggaggacaagcagaacacggagattgtggatgaggacccgttt
gccatccagatcatggcctggtgtcctgagagcaggatcctgtgtgtggccggggtgtct
gccaacgtcataatataccgcttcagcaagcaggagatcaccaccgaagtcgtacagcta
ttggaggtgcgcttgcagtacgaggtgaatgacatggagtcccctccagaggggggagga
gggggtgaccgcggaggcgggggggaccgtgacctgcccacccccggaacagcctcaccc
agcccccagaccaccggacccccgacacacccctccaccagcagcaactcctctgacggg
gtccgagacaacgtagcctgccttaagtatgcaccctgcaccaccaccgggtcacataca
gtacttaccatacatacacattccctctctgcaacaaagtgggcctttgggacacaccac
ttagctacccacccacaggctatccaactgggtggggagctacccccccccccccccctc
tttctctctctctgtctttctctccctctccatctctctctctctatctatagggtgcgt
agttcccctctaaagcagtctccagggtaccaggtagagttggtggtgcagctggtgtgg
gtgagtggagagcccccccaacagatcacaagcctggccctcaactcctcctacggactg
attgtgtttgggaacagtaatggtctggcagtggtggactacctccagaagacagtgctg
ttgaacctggggacagtggagctgtatgggtctaacgatccctaccagagacagcctcgc
tcgccacgcaagacacgccagccttccggaggtaatggtctgtgtgatatcaacgagggc
tctgcctcggaggaccgctgcaaatcccccacttcagtgttggcgttaaaccatcagcaa
ttctacaatggaagtgggggtagaggagcaaagatgtcacggaaattaagcttgcctact
gagctaaagccagacttggtcctcctgtctgtatgtcctccacggggcgccaacccacta
gaccaccgggacaactccttcagccgttcacgctcctcctccgtcacctccattgacaag
gaggcacgcgaggccatcacctccttccacttctgtgagacattcgctcggaagggggac
agcaccatcacaccctgcctgtacgtgggcacctccctgggcacagtgctggctgtggcc
ctcaacttgcctcctgctggggaacagaggctactgcagcccgtcatcgtcttgcctagc
ggtaccctggggcgtctaaagggcagtatcctgaggatggccttcctggacaacacgggc
accttccttccccctgccttcgagctgtggtacgagcccaacgccgtgggcgccgacagt
gaggagcgagacaaagcccgtaaacgccgcccggtctctgtgtcgccctccacctcccag
gagctgcaggagagccagtatgcggtggtgtgctctgagaaacaggctaaggtcatagca
ctgccctcccagaactgcatattcaaacacagcatcacagagacatcgttcgtcctgagg
gctgacgtggtccagatgaacatagggaactgtgtggcctgtttctgtgctaacggacac
atcatgaccctcagtctgccagggctgagaccgttgcttgatgtaaactacctgccgctg
acagacatgcggatagcccggaccttctgcttcaccaaccttggccaggccatgtacctc
acctcccccactgagatacagaggatcacatacagccaggagacctgcgagaacctgcag
gagatgctaggagaactgttcacaccagtggagaccccggaggctcccaaccgaggattc
ttcaagggcctttttgggggaggagcaacttccctggacagagaggagctatttggcgag
acgcaggcgggtaaagcatcccgtggccttgcccagcacatcccgggtcctcagggactg
gaaggcatgaagggggcagcctcgggcgtggtggcggacctggcacgtgcccggatagcg
ctggacgagagagggcagaaactgggcgagctggacgagaggacggccgccatgctggcc
agcgcagactcctttggcaaacacgcccacgatatgatgctgaagtgcaaagacaagaag
tggtaccagttctga

DBGET integrated database retrieval system