Salvelinus fontinalis (brook trout): 129817194
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Entry
129817194 CDS
T11136
Name
(RefSeq) glycerophosphocholine phosphodiesterase GPCPD1-like isoform X1
KO
K18695
glycerophosphocholine phosphodiesterase GPCPD1 [EC:
3.1.4.2
]
Organism
sfon Salvelinus fontinalis (brook trout)
Pathway
sfon00564
Glycerophospholipid metabolism
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09100 Metabolism
09103 Lipid metabolism
00564 Glycerophospholipid metabolism
129817194
Enzymes [BR:
sfon01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.2 glycerophosphocholine phosphodiesterase
129817194
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Motif
Pfam:
GDPD
CBM_20
C2_GDE1
TreTu_C
Motif
Other DBs
NCBI-GeneID:
129817194
NCBI-ProteinID:
XP_055728165
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Position
20:complement(6017783..6037692)
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AA seq
670 aa
AA seq
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METTQVTLAVRGDTSPGEVIAVVGSCEALGGWCHQRAVTLQPAEHDGTLWKRTVSVPRGA
VPTYRYFKGHFLESKSAGGPCQVIVTKWETHQQPRLMSPTESHLDIDDGQFGFHNGSACI
DSGWLTCQTEIRLRLHYSKTSPVSITKKKYKKSRFRIKLTLEGVEEDDEDDEPELSAASW
HKMTTTLETSMISGDGYKSRHSQPECGYALEASQWTEYVIHTMDPDNLELTFDFFEEDMG
EHVMPGDAHPGTAGTACLLSSFFVESGKDTGVVTLPIMKRNSRQTLGKVRVDYLVIRPIE
GLQCDMSSSFTKYWRKRSAPLDVGHRGAGSTHAAKHTKVRENTIASFKSAANHGAAYVEF
DVHLSKDCVPIVYHDLTCCISTKKKGDKHSLERFEVPVKDLTYDQLQQLKLGHASALKVN
DHKDDDDEEEVDEHQPFPSFSQIFHAVPENVGFNIELKWICQMKDGSWEGNLSSYFNMNL
FLDIILSCVLQRAGKRRIVFSCFDPDVCTMVRQKQNKYPILFLTQGISETYPELMDIRCR
TTQIAMSFAQSENILGISAHTEELLQNLEHIREAQSKGLVVFCWGDLNNDHDNRTKLREQ
GIDGLIYDRICDDQVEQADIFKVEEKHTLQETLKSFVCSCYSIPCQAPVCVTAAKVHNGS
AESDSGLSSS
NT seq
2013 nt
NT seq
+upstream
nt +downstream
nt
atggagacaactcaagtgactttggcagttaggggagacacatccccaggtgaggtgata
gctgtggttggtagctgtgaagctttaggaggctggtgccatcaaagagctgtgacccta
caaccggctgaacacgatgggacattgtggaagaggaccgtcagtgtgcccagaggtgct
gtgccaacctatcgttacttcaaaggccacttcctggagtcaaagagtgcaggtggtccc
tgtcaggtgatagtcactaagtgggaaacccatcagcagccacgtctgatgagccccaca
gaatcacaccttgatattgacgatggccaatttggattccacaacggctcagcgtgtata
gactctgggtggctgacgtgccagacagagatccgtctgcgtctgcactactccaagacg
tctcccgtctccatcaccaagaagaaatacaagaagtctcgcttcaggatcaagctgacg
cttgagggtgtggaggaggatgatgaagatgacgagccggagctgagcgccgcgtcgtgg
cacaagatgaccaccacgctggagaccagtatgatcagtggagatgggtacaagtcccgc
cactcccagcccgagtgtggctacgccctggaggcctcacagtggacagagtacgtcatc
cacaccatggaccccgacaacctggaactcaccttcgacttctttgaggaagacatgggt
gagcacgtgatgccaggggatgcccacccagggacggcgggtacggcctgcctcctctcc
tcattcttcgtggagagtggcaaggacacgggtgtggtcactctgcccatcatgaaacgc
aactccagacagaccctgggcaaagtcagagtggactacctggtgatccgtcctatcgag
ggactgcagtgtgacatgagctcctccttcaccaagtactggaggaagaggagtgccccc
ctggacgtaggccacagaggggccggcagcacacacgcagccaaacataccaaagtcagg
gagaacaccattgcttcgttcaaaagtgctgccaatcatggggctgcctatgtggagttt
gacgtccatctctccaaggactgtgtccctatcgtgtaccacgatctcacctgttgcatc
tccacgaagaagaaaggagacaagcactctctggagcggtttgaagttccggtgaaagat
ctcacgtacgaccagctacagcagctcaagctgggccatgcttctgccttgaaggtgaac
gaccacaaagatgacgacgacgaggaagaggttgacgaacaccagcccttcccttcattc
tcacagatcttccatgcggtgcctgaaaatgtgggcttcaacatcgagctcaagtggatt
tgtcagatgaaggatggttcgtgggaaggaaacctgtcttcctacttcaacatgaacctg
ttcctggacatcatactgagctgtgtgctgcagagagccggcaagagacgcatcgtcttc
tcctgcttcgaccctgacgtctgcactatggttcgtcagaagcagaacaagtaccctatc
ttgttcctgacccagggcatctctgagacctatcctgagctcatggacatccgctgtcgg
accacacagatcgccatgagctttgcgcagagcgaaaacatcctgggtatcagtgcccac
acagaggagctgcttcagaacctggagcacatccgagaggcccaatctaaaggcctggtg
gtgttctgctggggagacctcaacaacgaccacgacaacaggaccaagctaagggagcag
ggcatcgacggactcatctatgacaggatctgtgacgaccaggttgagcaggccgacatc
ttcaaagtagaggagaagcacactctgcaggagactctcaagagctttgtgtgctcctgt
tactccatcccctgccaggcgcctgtctgcgtgaccgccgccaaagttcacaacggcagc
gccgagtccgactcgggcctcagctcttcctga
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