Salvelinus fontinalis (brook trout): 129817239
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Entry
129817239 CDS
T11136
Name
(RefSeq) nuclear pore complex protein Nup98-Nup96-like isoform X1
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
sfon Salvelinus fontinalis (brook trout)
Pathway
sfon03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
129817239
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sfon03019
]
129817239
03036 Chromosome and associated proteins [BR:
sfon03036
]
129817239
Messenger RNA biogenesis [BR:
sfon03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
129817239
Chromosome and associated proteins [BR:
sfon03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
129817239
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
129817239
NCBI-ProteinID:
XP_055728255
LinkDB
All DBs
Position
2:complement(33119167..33141956)
Genome browser
AA seq
1826 aa
AA seq
DB search
MFNKSFGAPFGGGTGGFGTSSTFGQQNTGFGATTGGFGASAFGATNNTGGLFGATQNKPV
VTANPQQIHTGAGRGGGLFGSSTFSQPVTSSTSSGFGFGTASGTSTSLFGSTNTGGGGGL
FSQQSNAFGAAKPASFGTFGTSTASSGGLFGATNSNPFGGASASLFGASGFTQQAAQPGT
TVKFNPATGSDTMVKGGVTTSINTKHQCITAMKEYENKSLEELRLEDYQAGRKGPTNPMA
APTGGLFGAAAAATPSTGAAGLFGSSATNTGFSFGQAKTNFGTSTGGFGAATGSLFGQQQ
QPQQAQQAASLFKPFGQATTTPNTGFSFGNTSTMGQPQQTSTMGGLFGSTAASQAGGLFG
NTAQTTPATGFGTGTGLFGQTNTAFGNVGTQQSLFGNKTAGFGATTTSASSFGTGTGLFG
NKSALTLGTGTNPSNFGFGPTAAGGSLFGNKAAAGGLGTGLGAGFGAAVGTGQMSLFGTN
KTLGSTLGTIGAFGPQGFSTGTSTLGFGAQQQPVALTDPNAAAAQQAVLQQQINALAYSP
FGDSPLFRNPLSDPKKKEERLKPTNPAAQKALTTPTHYKLTPRPATRVRPKALTSSGSSK
SQLFDGLDDDEPSLTNGAFMPRKSIKKLVLKNLNGSSLYSSPINRDTDDLASPPEYPLNG
LSASVDEDDYVREVVEGGAEDDLEINKFYTKPSLQDTISELNTHRVGARGRNGLEVSSED
ISLGEDSIQEEREEEVQEVPPHPAGIVLCRVGYYTIPAMDELSKMVDENGVCVVENFTVG
RKGYGSVFFHGEVNVTGLNLDEIVHFRRKEVIVYPDDKNKPAEGEGLNRRAEVTLDGVWP
NDKTTCTQIKSPERLSEMNYEGRLENASRKQGARFLEYRPETGSWVFEVAHFSKYGLQDS
DEDEEVPLKVDPKKLKTATTLPPGLQQLSPSQQQVAPQAQSKAVLELLSRMSEVDSDMAD
ITQDAPGESMLEEEGESGMGEEKGSRLGTVTPTEHNPVSASSQIASSLGINPHTLQIMKA
SLFAEDDDGDMFLEQGGMKSSLDRASPRILLPGTQGRPSIGGLLQTRFSGAGLFPQLPDV
PFGGGLPGRLSMSRPSAVVPEPSRLSPWPSLGPSFLLPAPAAEATVRTVGARRLGGPVAP
ENSVTLGKGRLLMDAALFTGRSFRVGWGPGWTLVHCGDRLSGAGDKEQDQGDTGAGGFGF
LPKHAKSKQLSDSPFKVVIEQVVGLEPRDSEESQAVYQRPLEIGLKHSTISTEGSCPFIQ
PQSGVAALHEYVEWITDLNQEAGAGDRVLAHWALVWTLCEALWGRLGTTEPGTSGYLQQL
ERRRSFSAWLSHSATQRIEEEVGLSQGGGHVEAIFSYLTGHRISDACRLAQKSGDHRLSL
LLSQAVGSQYGRELLALQLGDWNRMQTDSFLQEERLRIFALLAGKPVWQSTDCVVNVCSE
LDWKRCVAVHLWYMLPPTASIADALAKYEAAFQGSAEGQKYACAPLPPYLDQSDRLDMEE
EESKRPLYDICFHLLKLYSDRHYSLQELLDPLTVTWDRLDYRLSWHLWSVLQALHYTHLS
PARQGLIHTSYAAQLESAGLWDMAIYVLLHISEDMLRERAVREMLQLHCPLLETEESAQK
ERFLTERLLIPEQWLHLAKATRARRETDRHREALHLYRAGHWNLCHRLVIQHLASDCIIN
DNHEYLLEFLEGLAVPERSAVIQDWDTAGRVYLDYIRVIQTLHAIQQMDSAGYKLERLHT
EVTSLCSRIELLPCSTAKDRLAQSDMAKRVANILRVVLSLQQGGEGGEIPLSQLAPHIGR
LPMPEDYALEELRSLTQSYLRQLIVS
NT seq
5481 nt
NT seq
+upstream
nt +downstream
nt
atgttcaacaagtcatttggtgctcctttcgggggagggaccggaggatttggaacttca
tccacgtttggacaacaaaacactggctttggggcgacgacaggtggcttcggggcctca
gcatttggggcgaccaacaacactggaggactctttggggcgacgcaaaataagccagtg
gtgacagccaatcctcagcaaatccacactggtgcaggtagaggaggtggcctgtttggt
tccagtacgttcagccagcccgtaacgtcgtccaccagtagcggctttgggtttggcacg
gccagcggcacatccactagcctgttcggcagcaccaacacgggcggcggcggaggactc
ttctcccagcagagcaatgctttcggagccgccaaaccagcctcctttggcacgtttggc
acgagcacggccagcagcggggggctgtttggggcgaccaactccaacccctttggaggg
gcgtctgcctccctgttcggagcttcagggttcacccagcaagccgctcagccaggcacc
actgtcaagttcaaccctgcaacgggaagtgacaccatggtgaaagggggtgtgaccacg
agcattaacaccaagcaccagtgcatcacggccatgaaggagtatgagaacaaatcactg
gaggagctgaggttggaggactaccaggcaggaaggaagggccccactaaccccatggct
gcaccgacggggggtctctttggggctgcggccgcagccacccccagtacgggggctgca
gggttgtttggctcctcggccaccaacacaggcttctccttcggccaggccaaaaccaac
ttcggcaccagtacgggtgggtttggtgcagccacaggcagtctgtttggccagcagcaa
cagccccagcaggcccagcaggcagccagcctgttcaagcccttcggtcaggccacaacc
acacccaacacaggattctccttcggcaacaccagcaccatgggccagccccaacaaacc
agcaccatggggggtctgtttgggagcaccgcggcgtcccaggcaggggggttgtttgga
aacacagctcagaccacaccagccactggctttgggacaggcaccgggctcttcggacaa
accaacaccgccttcgggaacgtcggcacacagcagagcttgtttggtaataagacggca
gggtttggagccaccaccaccagcgcgtcgtcgtttggcacaggcaccggactcttcgga
aacaaatccgccctcaccctcggaacaggcaccaacccatctaacttcggttttggaccc
actgctgctggcggaagcctctttgggaacaaggcggcagcaggaggactggggactgga
ctgggagctggctttggagcagcggtgggcactgggcagatgtctctgtttgggactaac
aagacactgggttccactctgggaacaataggagcgttcggaccgcagggattcagcaca
ggaaccagcactctgggcttcggagcacaacaacagcctgtcgcgctgacagaccctaac
gcagcggcggcccagcaggcagtgctgcagcagcagatcaatgctctggcctactccccc
tttggtgactcccccctcttcagaaaccccctctctgaccccaagaaaaaggaggagcgt
ctaaagcccaccaatccggcggcccagaaggcgttgaccacgcccactcactacaagctg
acgccgcggcctgcaacacgtgtgcggcccaaagctctgacgtcttcgggctcctccaag
tctcagctgtttgacgggctggatgacgacgagccttctctcaccaatggagccttcatg
cccaggaagagcatcaagaagctggtgctgaagaacctgaatggcagcagcctgtacagc
agcccaatcaacagagacacagatgacctggcctctccaccggagtaccccctcaacgga
ctcagtgccagtgtggacgaggatgattatgtgagggaggtggtggagggaggggccgag
gatgacctggagatcaacaagttctacaccaagcccagcctgcaggacaccatctcagag
ctcaacacccatagggtgggggccaggggcaggaatggcctggaggtgagcagcgaggac
atatcgctgggggaggactccatacaggaggagcgagaggaggaggtgcaggaggttccc
ccacatcctgcaggtatcgttctgtgccgtgtgggatactataccatccccgccatggac
gagctgtccaagatggtggacgagaacggcgtgtgtgtggtggagaacttcaccgtgggc
agaaaaggttacggttcagtgtttttccatggcgaggtgaatgtgactgggctgaacctg
gatgagattgttcacttcagacgcaaagaggtcatcgtctaccccgacgacaagaacaag
cctgctgagggggaggggctcaacaggcgagcggaggtgactctggatggggtgtggcct
aatgataagaccacttgtactcagataaagagccctgagcgtctgtctgagatgaactac
gagggccgcctggagaacgcctcacgcaaacagggcgcccgcttccttgagtaccgcccc
gagaccggctcctgggtgtttgaagtggcccacttctctaagtacggcctgcaggactct
gacgaggatgaggaagtgcctctcaaagtggaccccaagaagctgaagacggccacaaca
ctgcccccggggctgcagcagctttctccctcccagcagcaggtggcgccacaggctcag
tccaaggctgtgctggagctgctgagtcgcatgtctgaggtggacagtgacatggccgac
attacccaggatgccccaggggagagcatgttggaagaggagggggagagcggcatgggg
gaggagaagggcagtcggctggggactgtgacccccacagaacacaaccctgtctctgca
tccagtcagatcgcctcctcgctgggaatcaaccctcacactctccagatcatgaaggca
tctctgtttgctgaggatgatgatggtgacatgttcctggagcagggaggaatgaagagc
tctctagacagggcctcccctcgcatcctcctgcctggcacccagggcaggccctccatc
ggtggtctcctgcagactcgtttcagcggggcaggtctcttccctcagctccctgatgtg
ccctttggagggggccttcccgggaggctgtccatgtctcggccgtccgcggtggttcct
gagccctcgcggctctccccctggccctcgctggggccctcattcctgctgccggcccca
gcggcagaggccactgtacggacggtgggggctcgacgcctggggggccctgtggcccca
gagaactcagtcacactggggaagggccgtctgctgatggatgcagctctgttcacgggc
cggtcgttccgggttggctggggtccaggctggactctggtccactgtggagacaggctg
agtggggctggggacaaggagcaggaccagggagacacaggagctggaggttttggattt
ctgcctaaacatgccaagagcaaacaactctcagacagtccgttcaaggtggtgatcgag
caggtggttggtctggagccgcgggacagtgaggagagccaggcggtgtaccagcggccc
ctggagatcggcctgaagcacagcaccatcagtacagaggggtcctgccccttcatccag
ccccagagtggggtggccgccttgcacgagtacgtggagtggatcactgacctcaaccag
gaggctggtgccggagacagggtccttgctcactgggctctggtgtggactctgtgtgag
gccttgtggggtcggctgggtacgacagaacctggtaccagcggctacctgcagcagctg
gagaggaggaggagcttctcagcctggctgtcccacagcgcaacgcagaggatcgaggaa
gaggtgggcctgagccaggggggaggacatgtggaggccatcttcagctacctcactgga
caccgcatcagtgacgcctgcaggctggctcagaagagtggggaccaccgcctctccctg
ctgctgtcccaggcggtgggctctcagtatggccgggagctgctggcgctgcagcttgga
gactggaacagaatgcaaacggactcattcctgcaggaggagaggctacgcatcttcgcc
ctgctcgccgggaaacctgtgtggcagtctacagactgtgtggtgaacgtgtgttcagag
ctggactggaagcgttgtgtggcggtccacctgtggtacatgctgcctcccaccgcctcc
atcgctgatgccctggccaagtacgaagccgccttccagggctctgcagagggtcagaag
tacgcctgcgcccccctgccaccctaccttgaccaatcagaccggctggacatggaggaa
gaagagtctaaacggccactctacgacatctgtttccacctgctcaaactatacagcgac
agacactacagcctgcaggagttgttggacccgctgacggtgacgtgggaccgtctggac
taccgtctgagctggcacctgtggtcggtcctgcaggcgctgcactacacacacctgagc
cccgcccgacagggcctcatacacaccagctacgctgcccagctggagagcgctggcctc
tgggacatggcaatctatgtactgctgcacatatctgaggacatgctccgtgagcgtgcg
gtgagggagatgctccaactccactgccctctgctggagacggaggagtctgcccagaaa
gagcgcttcctcacagaaagactactgatcccagaacagtggctccacctggccaaagct
actagagccagaagagagacagacagacacagagaggccctgcacctgtacagagcaggc
cactggaacctctgccataggctggtcatacaacacctagcctcagactgtatcattaat
gataaccatgagtacctgttggagttcttggaggggctggctgttccagagcgcagtgct
gtgatccaggactgggacacggcaggcagagtctacctggactacatcagagtcatacag
accttacacgccatacaacagatggacagtgctggttataagctggaacgtctacacacc
gaggtgacatcactctgcagcaggatagagctcctcccctgctccaccgccaaggaccgt
ctcgcccaatcagatatggccaagcgagtggctaacatcctgcgtgtggtgttgagtctg
cagcagggtggtgagggtggcgagatccccttgtcccagctagcgccccacatcggccgt
ctgcccatgcctgaggactatgccctcgaggagctccggagcctcacccaatcatacctg
agacagctcatcgtcagctaa
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