Salvelinus fontinalis (brook trout): 129817294
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Entry
129817294 CDS
T11136
Symbol
rad51b
Name
(RefSeq) DNA repair protein RAD51 homolog 2 isoform X1
KO
K10869
RAD51-like protein 1
Organism
sfon Salvelinus fontinalis (brook trout)
Pathway
sfon03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
129817294 (rad51b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sfon03400
]
129817294 (rad51b)
DNA repair and recombination proteins [BR:
sfon03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecA family proteins
129817294 (rad51b)
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GFIT
Motif
Pfam:
Rad51
HHH_XRCC3_RpoA
AAA_25
ATPase
RecA_N
DnaB_C
ABC_tran
RAD51D_N
AAA_22
DUF7125
Rad17
ATPase_2
AAA_18
Motif
Other DBs
NCBI-GeneID:
129817294
NCBI-ProteinID:
XP_055728363
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Position
20:complement(11284503..11364217)
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AA seq
379 aa
AA seq
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MASKKLRRTGVSLEVCERLKRHQIETCQDLLSLTPLEVMRLAGQSYQQVLMLLQSVSQAC
APSMTTALEVWKQRADLFFSTSLPALDRLLQGGLPRGTLTEVTGPSGCGKSQVCMMLSVL
ATLPKYMGGLDSGVIYIDTESAFSAERLVEIAQSRFPDYFCEKERVLEMAGRVHLFRELT
CQDVLDRLERLEEDIISSKAGLVILDSVASVVRKEYDTRLPGNLTHRSNLLGQEAATLKY
LAQAFHIPVVLTNQITTHVGDRGERGAASFRGASDERDSGYVTAALGNTWSHSVNTRLIV
QYVDAHQRQIVIAKSPVAPFAVLNYTVQKEGIRLEGNDDNQEMLHQGTDPGLQPIRVRTG
FNYNLTQANPAAVGPLKRL
NT seq
1140 nt
NT seq
+upstream
nt +downstream
nt
atggcaagtaaaaagctcagaagaacaggtgtgtcactcgaagtatgcgaacgactcaag
cgccaccaaattgaaacttgccaggacctgctgtccctcacacctctagaggtgatgcgc
ctcgcggggcagagttaccagcaggtgttgatgctgctgcaatcagtcagccaggcctgt
gctccctcaatgaccaccgcattggaggtgtggaagcagagggctgacctgtttttctcc
acatccctacctgccctggacagactgcttcagggagggctaccacgggggacactcaca
gaggtgactggcccctcaggttgtgggaagagccaggtgtgtatgatgctcagtgtgctg
gccactctgccaaagtacatgggtggcctcgacagcggagtcatctacatagatacggag
tctgctttctcagcagagaggttagtggagattgctcagagcaggtttccagactacttc
tgtgagaaggagcgtgtgttggagatggctggacgtgtccacctttttcgggagctcacg
tgtcaggatgtcctggacagactggagaggctggaggaggacatcatctcctccaaggct
gggttggtgattcttgactcggtggcctcagtggtgaggaaggagtatgacacaagactg
cctgggaacctcactcaccgcagcaacctgctgggccaggaggctgccaccctcaaatac
ctggctcaggcctttcacatccctgtggtcttgaccaaccagatcacgacgcatgtgggc
gatcgaggagagagaggcgctgcgtcattcaggggagcatctgatgagagggattctggg
tatgtgacggcggcgctggggaacacatggagtcatagcgtcaacacccgcctcattgtc
cagtatgtagatgcacaccaaagacagattgtgatagcgaagtcacctgtggccccgttt
gctgttctaaactacaccgtccagaaggagggcatccgtctagagggaaatgatgataac
caggaaatgttgcatcaaggcacagacccgggcctccagccgatcagagtgcggacagga
ttcaactacaacctgacacaagccaatcctgctgctgttggccccctgaagcgtctttga
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