Salvelinus fontinalis (brook trout): 129817489
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Entry
129817489 CDS
T11136
Name
(RefSeq) afadin-like isoform X1
KO
K05702
afadin
Organism
sfon Salvelinus fontinalis (brook trout)
Pathway
sfon04517
IgSF CAM signaling
sfon04520
Adherens junction
sfon04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
129817489
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
129817489
04530 Tight junction
129817489
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Gene cluster
GFIT
Motif
Pfam:
RA
DIL
PDZ
FHA
PDZ_6
RA_2
PDZ_2
RA_3
RASSF8-10_RA
Yop-YscD_cpl
Motif
Other DBs
NCBI-GeneID:
129817489
NCBI-ProteinID:
XP_055728740
LinkDB
All DBs
Position
20:20315498..20445651
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AA seq
1957 aa
AA seq
DB search
MSGTREEERRKLADIINHWNANRLDLFEISQPTEDLEFHGVMRFYFQDRVAGNFATKCIR
VSSTATTQDVIETLAEKFRPDMRMLSSPKYSLYEVHVSGEERKLDLDEKPLVVQLNWNKD
DREGRFVLKNENDIIPKKVQSNGPEKEGVIQNFKRTLSKKEKKKEKKREKEAHISDGDEQ
ALSREDGENSRLAAEVYKDMPENSFTRTISNPEVVMKRRRQQKLEKRMQEFRSSDGRPDS
GGTLRIYADSLKPNIPYKTILLSTTDMADFAVVEALEKYGLEKENPREYCIARHTDDKSG
KEIILDDTECPLQIFRDWPNDRGDLVFQLKKRPPDYVPKKGRKPEDKGPRGKGMDVPLHG
SLPPEKLPYLVELSPGRGNHYGYYTYRHHEDGSDSRDKPKLYRLQHSVTEVGSDTTDDGS
IQLFGPGILPHHCKLMHTEGLVTVTPHSLEAETYVDGQRVTETTVLRSGATLQFGVSHVF
KFVDPSYDHSMGKGGPGPMMRSRHKSGSVPETTFDLQGDLHSGTALSTSKSSGKLEMERS
SNGSERGMVKPMIRGEQQDSRSQDILSPELTLPASIEFRDNSEDTFLTAIINYTNSSTVH
FKLSPTYVLYMTCRYVMSSHYRPDISPSERTHKVIAIVNKMVSMMEGVIQEIPEADQKQK
NIAGALAFWMANASELLNFIKQDKDLSRITLDAQDVLAHLVQMAFKYLVQCLQSDLSNYM
PAFLDDPEEQNPQRPKIEDVLHTLTGAMSLLRRCRVNAALTIQLFSQLFHFINMWLFNKL
VMEADSGLCSHYWGAILRQQLSHIEAWAEKQGLELAADCHLSRIVQATTLLTMDKYSMQD
VQNIHNTCFKLNSLQLNALMTNYHCAPDEPYIPPELIDHVVAVAENTADELARSDGREVQ
LEEDPDLQLPFLLPEDGYSCDVVRNIPNGFQEFLDPLCQRGFCRLTPHPHSPGTWTIHFE
GVDCDSHFSADNSNLQMRKEPEVVTVTLKKHNGMGLSIVAAKGAGQDKLGIYIKSVVKGG
AADMDGRLAAGDQLLSVDGRSLVGLSQERAAELMTRTGSVVTLEVAKQGAIYHGLATLLN
QPSPMMPRASQGGRDKNGKLRPKSEGFELYNNSVQNGSPESPQADWQAYPEPKKMSGEER
LLKNRADHRSSPNVANQSQSPGGKAVYTRGPGTKITSVSTGNLCVDDEPSPPHPEAYPIP
TQTYPREYFTIPASKSTNRMDPAPGQLYADDRGPPGPMEDHHHNSIAMQRVDHSQEELCD
LPGGYPPTGLRPEDLVHLHQQQQREADYQRGSGEHWVNHHQVSSSVESSTSSQEHLNYSS
SSSNKTQSNHKSGPGRWKTPGPIAPHPGPVAQSTRTDLPPPPPPPPPVHYQDFELQPDLP
LPPPPSANQQQAAAAAAAADRKKREEQQRWYEKEKARLEEERERKRREQERKLGQVRNPA
VPVAHNNNQHGGTLPPPTQHQQMPPPRSPMQQVPHPYLPPQGQQQAQQQQPPRPEKLSTL
PRAGPLPPQGNPMDTVIRELLPQQQPRTIERRDLQYITISKEELSSSDSLSPDPWKRDAR
EKLEKQQQLHIVDLLDREIQDLQAKPERTAEESDRLRKLMLEWQFQKRLQESKQSDEEDE
EDDDEDVDTMMIMQRLEAEKRARQTAVPAISVLDLLQDEERRRKQQLEEIRKREAEDRAK
QEEERRWREEERARREVDEKRRQEEEYYTRLEEGRRRQHEEAERKLLTPDEPGLYRPPLP
RDYQPQPPPPTASPATTATNAPPPPPQRNTSYLKTQVVSPDALYTAKFVSYNDEEDEDTT
GLAGQVKLSSTRKSYGDLPPAHKPQPPARKPRPMSDGIFLSSSFQPPAVNANSTAGQPPP
PPIKPCLGFIPTGNFKGFNSYTGNTTGVVGSGEVYKDPREKWTKGGQEQENTLTEGAPES
MTFKERQRLFSQGKEVSNKVKASRKLMELENELNTKQ
NT seq
5874 nt
NT seq
+upstream
nt +downstream
nt
atgtcggggaccagggaggaggagcggcggaaactagccgacatcattaaccactggaac
gccaaccggcttgacctgttcgagatcagccaacccaccgaggacttggagttccacggc
gtgatgcgtttctacttccaggaccgtgtagcagggaactttgccaccaagtgtatccgc
gtgtcctccacggccaccactcaggatgtcatcgagacgctggccgagaagttccggccc
gacatgaggatgctctcctcgcccaaatactccctctacgaggtccatgtcagcggggaa
gaacggaagctggacctggatgagaagccactggtggtgcagctcaactggaacaaagac
gaccgtgagggacgtttcgtcctcaagaatgagaacgacatcatccccaagaaggtgcag
agcaacgggccggagaaggagggagtgatccagaacttcaagcggacactgtccaagaaa
gagaagaagaaggagaagaagcgagaaaaggaggctcacatttctgacggagatgagcaa
gcactgagcagagaagatggtgagaactccagactggcggcggaggtgtacaaggacatg
ccagagaacagcttcaccaggaccatctccaaccctgaggtggtgatgaagaggaggcgg
cagcagaaactggagaagcggatgcaggagttccgcagcagcgacggcaggccagactcg
ggggggacgttgaggatctatgcagacagtctgaaacccaatattccctataagaccatc
ttgctgtccacgacagacatggcagactttgctgtggtggaggccctggagaagtacggc
ctggagaaggagaacccccgggagtactgcatcgccaggcacacagatgacaagtctggg
aaggagatcatcctggacgatacagagtgtcctcttcagatcttcagagactggcccaac
gacagaggggacctagtattccagctgaagaagagacctccagactacgtgccaaagaag
ggccgcaagccagaggacaagggccccagggggaagggcatggacgtgcccctgcatggg
tctctacccccagagaaactgccttacctggtggagctcagcccagggagggggaatcac
tatggctactacacctatcggcaccacgaagacggctcagactccagggacaaaccgaaa
ctctaccgcctgcagcacagtgttactgaggtgggctcagacactacagacgacggctcc
atccagctgtttggtccaggtatcctgccccaccactgtaaactgatgcatacggaggga
ttggtgacagtgacaccacacagcctggaggctgagacttacgtggatggccagcgtgtc
accgagaccaccgtgctacgaagcggagccacactgcagttcggcgtctcccacgtcttc
aagtttgtggaccccagctacgaccacagcatgggcaagggagggcccggaccaatgatg
agaagcaggcacaagtcaggaagtgttcctgagacgacctttgacctgcaaggggacctc
cacagtgggacggccctctccaccagcaagagctcagggaagctggaaatggagcgttca
tccaacggcagtgagagaggcatggtcaaacccatgatccgcggggagcagcaggacagc
aggtcccaggacatcctgagcccagaactgacgctgccggccagcatcgagttcagggac
aactccgaagataccttcctgacggccatcatcaactacaccaacagctccacggtgcac
ttcaagctgtcccccacctacgtgttgtacatgacctgtcgctacgtcatgtccagccac
tatcggcccgacatcagcccctcggagcgcacccacaaagtcatagccatcgtcaacaag
atggtgagcatgatggaaggagtcatccaggagattcctgaagcggaccagaagcagaag
aacattgcgggggccctggctttctggatggccaatgcctcagagctgctcaacttcatc
aagcaggacaaggacctgtcgcgcatcacactagacgcccaggacgtgctggcacacctc
gtccagatggccttcaagtacctggtccagtgtctgcagtctgacctgagtaactacatg
cctgccttcctggacgacccagaggaacagaaccctcaaaggcccaaaatagaggatgtt
ttgcacaccctgacgggcgccatgtcgctgctgcgtcgttgccgtgtcaacgcggcgctg
accatccagctgttctcccagctcttccacttcatcaacatgtggctgttcaacaagctg
gtgatggaggctgactctggactgtgttcacactactggggcgccatcctccgccagcag
ctcagccacatcgaggcctgggcagagaaacagggcctggagctggctgccgactgccac
ctcagtcgcatcgtacaggctacgactctcctcaccatggacaagtactctatgcaggac
gtgcagaacatccacaacacctgcttcaagctgaactccctgcagctcaacgccctcatg
accaactaccactgtgctcctgacgagccttacatccccccagagctcatagaccacgtg
gttgccgtggcggagaacacagcagatgaactggcccgtagcgacggccgagaggtccag
ctagaggaggaccctgacctgcagctgcccttcctactgcccgaggacggctactcctgc
gacgtcgtgaggaacattcccaacggattccaggagttcctggaccccctttgtcagaga
ggattctgtcggctaacccctcacccacactcccctgggacctggaccatccactttgaa
ggagtcgactgcgacagccacttctctgcagacaactccaacctgcaaatgcggaaggaa
ccggaagttgtgacggtcaccctgaagaagcacaatggcatgggcctcagcattgtggct
gccaagggtgctgggcaggacaagctcgggatctacatcaagtctgttgtgaagggaggc
gcggctgacatggacgggcgtctggctgcaggggaccagctgctgagtgtggacggccgc
agcctggtgggcctctcccaggagagggctgcggagttgatgacgaggacaggctctgtg
gtgacactggaggtggccaaacagggagccatctaccacggcctggccacgctcctcaac
cagccttctcctatgatgcccagagcgtcgcaaggagggcgtgacaagaatggtaaactg
agaccaaagagcgaaggctttgaactgtacaacaactcggtccagaacggatctccagag
agcccccaggccgactggcaggcctacccagaaccaaagaagatgagcggggaggagagg
ctactgaagaaccgggccgaccaccgctccagccccaacgtggccaaccagagccagagt
ccgggagggaaggccgtctacacacgaggacctgggaccaagatcacctctgtctccacg
ggcaacctgtgtgttgatgacgagccctctccaccccatccggaggcctatcctattccc
actcagacctaccccagggaatacttcaccatcccagcctccaagtctacaaaccggatg
gacccagccccaggacagttatacgctgacgacaggggtcctcccggccccatggaagac
caccaccacaatagcatagctatgcagcgggtggaccactctcaggaggagctgtgtgac
ctcccggggggctaccctccaaccggcctgcgtcctgaggacctggtccacctgcaccag
cagcagcagagagaggctgactaccagcgaggcagtggggaacactgggtcaaccaccac
caggtctcctcctctgtggagtcctccacctccagccaggagcacctcaactactcctcg
tcctcctccaacaagacccagagcaaccacaagagtggcccgggacgctggaagaccccc
ggccccatcgccccccacccagggcccgtggcccagtccacacgcacggacctccctccc
cctccaccaccccctccccccgtacactaccaggactttgagctccagcccgaccttccc
ctgccccctcctccttcggccaaccagcagcaggccgcagcagcagccgccgccgccgac
cgcaagaagcgcgaggagcagcagcgctggtatgagaaggagaaggcccggttagaggag
gagagggagaggaagaggagggagcaggagaggaagctgggacaggtccgtaacccagct
gtgcctgtagcccacaacaacaaccaacacggaggcacactcccccctcccacacagcac
cagcagatgccccctccccggtcccccatgcagcaggtgccccatccctacctccccccc
cagggccaacagcaggcccagcaacagcagccccccaggccagagaaactgtccaccctg
cccagagcgggccccctgccccctcagggtaacccaatggacacagtgatcagagagctg
ctcccccagcagcagccccgcaccatcgagcgccgggacctgcagtacatcaccatcagc
aaggaggagctgtcttccagcgacagcctgtccccagacccctggaagagggacgcccgg
gagaagctggagaagcagcagcagctgcacatcgtagacctgctggacagggagatccag
gacctgcaggccaagccggagcgtacggccgaggagagcgaccggctcaggaagctgatg
ctggagtggcagttccagaagagactgcaggagtccaagcagagtgatgaggaagatgag
gaggatgacgacgaggacgtggacaccatgatgatcatgcagcggctggaggcagagaag
agagcaaggcagactgctgtcccagcaatctctgttctagacttgttgcaggacgaggag
cggcggaggaagcaacagctggaggagatccgtaaacgcgaagcggaggaccgggccaaa
caggaggaggagagacgctggagagaggaggagagggccagacgagaggtcgatgagaag
aggagacaggaggaggagtactacacacgcctggaggaagggcggcgccggcagcacgag
gaggccgagcgcaagctgctgacgcctgatgagcctggtctgtacagacctcccctcccc
agggactaccagcctcagcccccccctcccactgcatcccccgcaaccactgccactaac
gctccaccacccccgcctcagagaaacacttcctacctcaaaacccaggtcgtctcacct
gacgccttgtacactgccaagtttgtctcgtacaatgacgaggaggatgaggacactaca
ggcctagcaggtcaggttaagctctcctccaccaggaagtcctatggcgacctcccgccc
gcacacaagccgcagccgcctgcgcgcaagccccgtcctatgtctgatgggatctttctg
tccagctcattccagccgccggctgtcaatgccaacagtactgcagggcagccccctccc
cctcccatcaaaccctgcctcggcttcatcccgacaggcaactttaaaggatttaattca
tacactggaaacacaacaggggttgtaggatcaggagaagtttacaaggacccgcgagaa
aagtggacgaaaggtggtcaagaacaggaaaacacattaactgaaggagccccggagagt
atgaccttcaaggagcgccagcggctcttttcccaagggaaggaagtatccaacaaagtc
aaggcctcgcgaaaactcatggagctggaaaatgaactcaatacaaagcagtag
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