Salvelinus fontinalis (brook trout): 129817626
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Entry
129817626 CDS
T11136
Name
(RefSeq) claudin-20-like
KO
K06087
claudin
Organism
sfon Salvelinus fontinalis (brook trout)
Pathway
sfon03272
Virion - Hepatitis viruses
sfon04382
Cornified envelope formation
sfon04514
Cell adhesion molecule (CAM) interaction
sfon04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03272 Virion - Hepatitis viruses
129817626
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
129817626
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
129817626
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
129817626
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
sfon03037
]
129817626
04147 Exosome [BR:
sfon04147
]
129817626
Cilium and associated proteins [BR:
sfon03037
]
Other cilia and associated proteins
Stereociliary proteins
129817626
Exosome [BR:
sfon04147
]
Exosomal proteins
Exosomal proteins of ovarian cancer cells
129817626
Exosomal proteins of colorectal cancer cells
129817626
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PMP22_Claudin
Claudin_2
Zip
Motif
Other DBs
NCBI-GeneID:
129817626
NCBI-ProteinID:
XP_055729031
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All DBs
Position
20:27820147..27836310
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AA seq
304 aa
AA seq
DB search
MASSTMQILAFALALLGVLGATVATLLPNWKVSADVGSNIMTAISQMQGLWMDCTWYSTG
VFSCTLKYSVLSLPAYLQTARTTMVLSCMMGCLGLCLAVLGLKCTRWGGSHRAKGHAAIA
AGGCFILAGILCLVPASWFTNEVITTFLDSNVPESSKYEPGGAVYVTFVSAGFLLAGGVI
FCLSCPGKRDYTSTSTSTTFPDKLLQQQINQEQLQRDLIQCDLIQREQQQREQKDFKQQT
SPNEQSSQEQLQWVDKGSQGKVQAADDIQQEKPLHEDKGTQQFYSPSRVPPKDTRAGYSL
QDYV
NT seq
915 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcctccaccatgcagatcctcgccttcgccctggcgctgctgggcgtcctgggc
gccaccgtggccacgctgctgcccaactggaaggtgagtgccgacgtgggctccaacatc
atgactgccatctcccagatgcaggggctgtggatggactgcacctggtacagcaccggc
gtgttcagctgcaccttgaagtactccgtgctgtcgctgcccgcctacctgcagaccgcc
aggacgacaatggttctatcgtgcatgatgggttgcctgggcctctgtctcgctgtccta
gggctgaagtgcacccgctgggggggcagtcaccgggcaaaggggcacgcagccattgcc
gcggggggttgcttcatcctggctggcatcctctgtctggtgcccgcttcctggttcacc
aacgaggtcatcaccaccttcctggactccaacgtgcccgagagcagtaaatacgagcct
gggggggccgtgtacgtgacctttgtctctgccggcttcctgcttgccggtggggtcatc
ttttgtttgtcgtgtcccggaaaaagagactacacctcgacctccacctctaccaccttt
cctgacaaactactgcagcagcagataaaccaggagcaactacagcgcgacctgatacag
tgtgacctgatacagcgcgagcaacagcaacgggagcagaaggactttaaacagcagacg
tcgcctaatgagcagtcgagccaggagcagctacagtgggttgacaaagggtcccagggt
aaggtccaagcagctgacgacatccagcaggagaagcctctacatgaagacaagggaacg
cagcagttctactctccatccagagtccctccaaaagacacccgggctggctacagcctg
caggactatgtttaa
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