Salvelinus fontinalis (brook trout): 129817835
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Entry
129817835 CDS
T11136
Symbol
ncor1
Name
(RefSeq) nuclear receptor corepressor 1 isoform X1
KO
K04650
nuclear receptor co-repressor 1
Organism
sfon Salvelinus fontinalis (brook trout)
Pathway
sfon04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
129817835 (ncor1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
sfon01009
]
129817835 (ncor1)
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sfon03036
]
129817835 (ncor1)
Protein phosphatases and associated proteins [BR:
sfon01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
129817835 (ncor1)
Chromosome and associated proteins [BR:
sfon03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
SMART complex
129817835 (ncor1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GPS2_interact
Myb_DNA-binding
Myb_DNA-bind_6
LOB
Motif
Other DBs
NCBI-GeneID:
129817835
NCBI-ProteinID:
XP_055729392
LinkDB
All DBs
Position
2:complement(36356370..36478899)
Genome browser
AA seq
2540 aa
AA seq
DB search
MSSSSGYPPTQGSFSSEQSRYPPHSVQYTFSTTRHQQEFTVPDYRGHLQDQQGRRRPSLL
SEFHPGTERPPERRHGYEQQFHSVTSQHQTDGHEALEAKRPRMETVSEAHFSHNALSGGI
VLPLQSHQVQDSLRASGGEVKKETQFSGMKAESQSPGGLHRVGEEQDSSPSKLSKEELIQ
SMDRVDREIAKVEQQIFKLKKKQQQLEEEAAKPVEPEKPATPPPIPQEHNKHRSIVQIIY
DENRKKAEEAHKIFEGLGPKVELPLYNQPSDTKVYHDNIKTNQVMRKKLILFFKRRNHAR
KQREQNICQRYDQLMEAWEKKVERMENNPRRKAKDSRTREYYERQFPEIRKQREQQERFQ
RVGQRGTGMSATIARSEHEISEIIDGLSEQENNEKQMRQLSVIPPMMYDTEQRRVRFINM
NGLMDDPMKVYKARQFMNVWTEHEKEIFKEKFVQHPKNFGLIASYLERKCVSDCVLYYYL
TKKNQNYKTLVRRNYGRRRGRNQQITRPSQEDKSDDKIEEEKLEKSEKKEDEQNKEEEEK
DEKEDSRDIGKDKDKCDGGEDEDGKEQSTPRGRKTANSQGRRKGRITTRSMANEAASVAT
EEPLPPASAPEPALPAESPQPPKAEPTTQKAVREPTKTASGGAPMDPNRGALGTAAAANI
ETGETSRWTEEEMEVAKKGLVEHGRNWPAIAKMVGTKSEAQCKNFYFNYKRRHNLDNLLQ
QHKQDIRRARGDRDPSQSESMASADDDENPEDSDGGENSSDTESAPSPSQADPSKAGGET
QRGDIAGGSESQRSDQDQASDRKGQDPSYGELRVKLEKSPEGEARDPDSQEDQDRERARA
AYEGQVHPKCEPQEVDMKPGGTEVQVKVEPDSAKEKGDNGEREEQREGHHSDNDSSATCS
ADEDVDAEPERQRIFSSMDKPSLLSPPGSVLMSTAKQAHLNMQQLQQRAAAIPPMVSHYS
NPHFSMIRYAHSERQAYGGRQQGESMSCLDQPTRQVGPFSTGGIPMGAPLSGFAMFQHQI
KAVHESAHAEDKQRQDQADPEHSRQPPNCPRFTTHSPTVLDREGKPFPYMPYDMKMALEQ
EAQSGRPGSPYRLSPRDMSKASPQPNDPNASRYSVPPVLQPAPNQVVQSLPDGVRVTFSR
HSRPANIPSPPPLIPTSKPTDKPSFIQGGSISQGTPGTYLPSHAVYGGPEVAKSSVGSIS
LGLPRQQDPTKPVSYIKQEECSPRGQSEGLLSQMQYEGVVRGGPMDGGISRGNPARGSIT
QGTPALSGSSIAADLLKGTITKLTTEDLSSPEKAREQLAKGHVIYEGKSGHILSYDAIKN
PREATCSPRSGHELKRSHDMMEAARGHSGREGAPFEGLIIRALPRESPHGESKERPMMTG
SIMQGTPRTSAEAYEESMKYGKQIKRESPPIRSFEGGIGKGKPYEGVNTIKEMGRSIHEI
PRQEQPGQDPRKTPDMAANSRASMEGSISQGHPLSQSAIKHNVKSLITSPSRLPHGPTMP
QLEAMERAKYEESKAAAEQQQRARHTSVVNSATSVLRSTHQEQGKSQLSPGMYQDADARR
TPVNYSTSSMSRGSPMLGRGQEGTGKPTSHDRKSAMTPNQRDSVPAKSPVSGGDPNHPMA
SHSPFDPHHRPMAPGEPRFHLPPHLDPTLFHRAVLDPAAYMFPRQPSPTGYHNTYQLYTM
ENTRQTILNDYITSQQMQVIPRPDVARGLSPREQQQIAISYPPGARGIIDLAQMPPTILL
PHPGGTGTPTMDRITYIPGAQPPFPPRPFNPASISPGHQAHLAATAAACQERERERERER
ERERDREHREKEREKERERENREREREEYRQRERERVVAAAVANDYMRGVPGQPDRPGSR
GYLRSPSPSMRSQEAQQQRPSIFQGTNSKGVITPLMPSAAAAAQAGARYSTAADALAALV
DAAASAPQMDVNKGKDSSKHDRDDDMSSSSSAARRQHEQQQQEADRRSMQSPYMSLPGGK
PHPGYAEGSGGPQGGKDKGPPTKSRIEEELRTRGKTTITAANFIDVIIKRQIASDKDSRE
RGSQSSDSSSSLSSSRYEVPSGAAIEVISPANSPAQAQQEKQQQDDRERADRDRAAQAAT
QAAGMRSFDMIRYRQSAESQQPPSSQADGGYSQSQQVPKTHRVMTLADHISHIITQDFAR
NQDPPQSSTTISSSATTTFQSAQLPVSSSGPGGRAKGHNRYSPENQTQAPSHHQRPTPSR
VSPENAPDKPRARPGKSPDRGGRGAVESYEPISPPQSYQDKQQEAREQQQQQPQRREADQ
PEMRGDSRSPGSVSYLPSFFTKLENTSPMVKSKKQEIFRKLNSSGVGDSDVGNAQPGTEI
FNLPAVTSSSSVNPRNHSFSDPASNLGLEDIIRKALMGNLEERPEEHQGGPQPSCNTPSN
EARQEANPSPIMGKQKLQSKANSRKSKSPNPGQAYAAAAQTAGGERPSSVSSVHSEGDYH
QQAPGWAWEDRPSSTGSMQFPYNPLTMRMLSSTPPTSMASPSMQAQQPPPGGPLGSQQQR
VWEREPLLSEQYETLSDSDD
NT seq
7623 nt
NT seq
+upstream
nt +downstream
nt
atgtccagtagctcgggctacccccctacccaggggagcttcagcagcgagcagagccgc
tacccaccacactctgtccagtacaccttcagcaccacacgtcaccaacaggagttcact
gtcccggactaccgaggtcacctgcaggaccagcagggtcggcgaaggccttccttgctt
tctgaattccaccctggaactgagaggcctccagagagacgtcatggctatgagcaacag
ttccacagtgtcacctcccagcaccagaccgatggacacgaggccctggaagccaagcgg
cctcgcatggagaccgtctctgaggcccacttttcccacaatgccctgtccggaggcatc
gttctgcccctgcagtcccaccaggtccaggacagcctcagagcctccggaggggaggtc
aagaaggagacccagttcagtggcatgaaagccgagtcccagtccccaggagggctgcac
cgtgtgggggaggagcaggacagctcgccctccaaactgtccaaggaggaactgatccag
agcatggaccgtgtggacagagaaatcgctaaagtggagcagcagatcttcaaactgaag
aagaagcagcaacaactggaggaggaagcggcgaagccagtggagccagaaaagccggcg
acccctccccccataccacaggaacacaacaaacaccgcagcatcgtccagatcatctat
gacgagaacaggaaaaaagctgaagaggcccataaaatatttgaaggtcttggtccaaaa
gttgaactgcccctttataaccagccatcggatactaaagtataccatgacaacataaag
actaatcaagtgatgaggaagaagctgattctgtttttcaagagaaggaaccatgctcgt
aaacaaagggaacagaacatctgccagcgctacgaccagctgatggaggcgtgggagaag
aaggtggagcggatggagaacaacccgcgtcgcaaggccaaggatagccgcaccagggag
tactacgagagacagttccccgaaatacgcaagcagagagagcagcaggagcgcttccaa
agggttggtcagagaggaactggaatgtctgcgaccatcgccagaagcgagcatgagatt
tctgaaatcatcgacggcctttctgaacaggagaacaacgagaagcagatgagacaactg
tccgtcatcccgcccatgatgtacgacacagagcagaggcgagtcaggttcatcaacatg
aacggcctgatggacgacccaatgaaggtgtacaaggctcggcagttcatgaatgtgtgg
accgaacacgagaaggagattttcaaggaaaagtttgttcagcacccaaaaaattttggc
ctcattgcttcctatctagagagaaagtgtgtctccgattgtgtcctgtactactacttg
accaagaagaaccagaactacaagacgctggtgagacgcaactacggaagacggcgaggg
agaaaccagcaaataacacgaccctcacaagaagacaagtcagacgacaaaatcgaagag
gagaaattggagaagtcagagaaaaaagaggacgagcagaataaggaagaggaagagaaa
gatgaaaaggaagactccagggacatcggcaaagacaaagacaagtgtgacggtggggaa
gacgaggacggaaaggagcagagcacgccgcgcggcagaaagaccgccaacagccagggc
cggcgcaagggaaggatcaccacacgctccatggccaacgaggctgcctctgtggcgacc
gaggagccactaccgccggcctccgcccctgagcctgccctgcctgcagagtctcctcaa
ccccccaaagctgagcctactacacagaaggccgttagagagcccaccaaaactgcatca
ggtggagctcccatggaccctaacagaggagcactaggaactgctgccgccgcgaacatt
gaaaccggtgagacttctcgctggaccgaggaggagatggaggttgccaaaaaaggcctt
gtggagcatgggcgtaactggccagccattgccaagatggtgggcaccaagagcgaggct
cagtgcaagaacttctacttcaactacaagagacggcacaacctggacaacctgctccag
caacacaagcaggacatccggcgggcacggggtgatcgggacccgtctcagagtgagagc
atggcctcagctgacgacgatgaaaacccagaggatagtgacggtggagagaatagctca
gacacagagagcgccccgtccccgtcccaggcggacccctccaaggccggaggagagacc
cagaggggagacatcgctggagggtcagagagtcagcggtctgatcaggaccaggccagc
gatagaaagggccaggatccgtcctacggggagctgagggtcaagctggagaagagcccg
gagggagaggccagagaccctgactctcaggaggatcaggacagggagagggcccgggcg
gcctacgagggccaggtgcaccccaagtgtgagccccaggaggtggacatgaagcccggt
ggtactgaggtacaggtgaaggtggagcctgactcggctaaggagaagggggacaatggg
gagagagaggagcagagagaggggcatcactcagacaatgactccagcgccacctgcagt
gcagatgaggatgtggacgctgagcccgagagacagaggattttctctagtatggacaag
ccttcgctgctcagccctcccggctcagtgctgatgtccacggccaagcaggcccacctc
aacatgcagcagctccagcagcgcgccgctgccatcccgcccatggtcagtcactatagc
aacccacacttttctatgatcagatatgcccattcggagaggcaggcatacggaggcagg
caacagggtgaaagcatgtcttgtttagaccaacctacccgtcaagtgggtcctttcagc
actggcgggatacccatgggagcccccctcagtggctttgccatgttccagcaccagatc
aaggcagtgcacgagtcggcccacgcggaggataaacagagacaggaccaggccgacccc
gagcacagcagacaacctcccaactgcccgcgcttcactacccacagccccactgtactg
gacagggagggtaagcccttcccctacatgccttatgatatgaagatggctctggagcag
gaggcccagtctggtcggccaggatctccctacaggctctctcccagggacatgagcaag
gcctctcctcagcccaacgaccccaacgcctcccgctacagcgtgcctccagtgctccag
ccagctcccaatcaggtggtccagagtctgcctgatggagtccgtgtgacgttctccaga
cacagccgacccgccaacattccatctcctcctccgctcattccaacctccaaacccaca
gacaagccttcctttatccagggcggctccatctcccagggaacgcctggtacatacctg
ccatcccatgctgtctacggtggcccagaggttgcaaagagctcagtgggctccatatcc
ctgggcctgcccaggcagcaggaccccaccaaacctgtgtcctacattaagcaggaggag
tgttctccgcgtggccagtcggagggcctcctctcccagatgcagtatgagggggtagtc
agaggaggcccaatggatgggggtatcagcagaggcaacccagccagaggatcaatcaca
cagggcacgccagccctgtctgggtccagcattgcggctgacctgctgaagggcaccatc
accaagctgaccacggaggacctaagcagcccagagaaggcccgggaacagctggccaag
ggacacgtcatctacgagggcaagagtggacacatcctatcctacgatgccattaagaac
ccaagagaggccacgtgtagccccaggtcaggccatgagctcaaacgctcccacgatatg
atggaggctgccagaggccactccgggagagaaggagcccccttcgaggggttgataatc
cgagccctgcccagagaaagtccccatggggagtctaaggagaggcccatgatgactgga
tccatcatgcaaggtacacccagaacctctgcagaggcctatgaggagagcatgaagtac
ggcaagcagataaagagggagagcccacccatccgctcatttgagggggggataggtaag
ggtaagccctacgagggggtgaacaccattaaggagatgggtcgctccatccatgagatc
ccccgtcaagagcaacctggacaggacccccgcaagacccccgacatggctgccaacagc
cgagccagcatggagggctccatatcccagggccatcctctgagccagtcggccatcaag
cacaacgtcaagtccctgatcaccagtcccagtaggctgccccacggccccaccatgccc
cagctggaggccatggagcgggccaagtatgaggagagcaaggcggcggcggagcagcag
cagcgggcgcgccacacctctgtggtcaactcggccacctccgtgctgcgctccacccac
caggagcaaggcaagtcccagctcagccctggcatgtaccaagacgcagatgcccgcagg
accccggtcaactacagcaccagctccatgtccagaggctcgcccatgctgggccgagga
caggagggcactgggaagcctacgtctcatgataggaagagtgccatgacccccaatcag
agggacagtgttccagctaagtcccctgtgtcagggggtgaccccaaccaccctatggcc
tcccacagcccctttgacccccaccaccgccccatggcccctggagagcctcgcttccac
ctgcctccacacctagaccctaccctcttccaccgggccgtcctggaccctgctgcatac
atgttcccgaggcagccgtccccgacgggctaccacaacacctaccagctgtacaccatg
gagaacacaaggcagaccattctcaacgattatatcacctcacagcagatgcaggttata
ccacggcccgacgttgccaggggcctgtcgccacgggaacagcaacagattgccatctct
tatcctcccggagcgcgagggattattgatctagcccagatgcctccaactatcctgttg
cctcaccctgggggaacaggtactcccactatggaccgcatcacctacatccccggagct
caaccccctttccctcctaggcctttcaacccagcctccatatctccaggccaccaagcc
cacctcgcagctacagcagcggcctgtcaggagcgagaacgagagagggagcgcgaaaga
gaaagggagcgcgatcgggagcatcgagagaaagagagggaaaaggagagagaaagggag
aacagggagagggaaagggaggagtacagacaacgagagcgtgagcgagtggtggctgca
gcggttgccaatgactacatgcgtggagttccagggcagccagatagaccaggaagccgt
ggttacctgcgtagcccctccccatctatgaggtcacaggaagcccagcagcagcgaccc
agcatcttccaaggaaccaacagcaagggcgtcatcacccctctcatgccatcagcagca
gcagcagcccaggcaggagcccgttatagcactgcagccgacgccctggctgccctggtg
gacgctgccgcatccgcccctcagatggacgtcaacaagggcaaggactcctccaagcac
gatcgagacgacgacatgtcttcatcatcctctgcggccaggcggcagcacgagcagcag
cagcaggaggcagacaggcgctccatgcagtctccctacatgtctctgccaggggggaaa
ccccacccaggatacgctgaggggtctggtggtccccaggggggcaaggacaagggtccc
cccaccaagtcacgcatcgaggaggagctgaggaccagaggaaagaccaccatcacggcc
gccaacttcatcgacgtcatcatcaagcgtcagatcgcctcggacaaggactcacgggag
agaggctcccagagctccgattcctccagcagcttgtcatccagtcggtatgaggttccc
agtggagcagccatcgaggtgatcagcccagccaactctccagcccaggcccagcaggag
aaacagcagcaggatgacagggagagggctgacagggacagggccgcacaggcagcaaca
caagcagctggcatgcgttcctttgacatgatccgctaccgccagtcagcggagtcccag
cagcccccctcctcccaggctgacggagggtactcccagtcccagcaggtccccaagacc
caccgggtcatgaccctggctgaccacatctcgcatattatcacccaggactttgccagg
aaccaggatcctcctcagtcctccaccaccatctcctcctctgccaccaccacattccag
agcgcccagctgccagtatctagctcgggccccgggggccgtgccaagggccacaaccgg
tacagcccagaaaaccagacccaggccccatcacaccatcagagacccacacccagcaga
gtgtctcctgagaatgcccctgacaagcccagagccagacctggtaaatcccctgatcgg
ggtggcaggggggcagtggagagttatgagcccatctcccctccccagagctaccaggat
aaacaacaggaggccagagagcagcagcagcaacaacctcagagacgagaggctgaccag
cctgagatgaggggcgactctcgctcccctggcagtgtcagctacctgccctccttcttc
accaagctggagaacacctcccctatggtgaaatccaagaagcaggagatatttcgtaag
ttaaactcttctggtgtcggggattctgatgtaggaaatgcacaaccaggcacagagatc
ttcaacttgcccgctgtgaccagctcaagcagcgtgaaccccaggaaccactccttcagc
gacccggccagtaacctgggcctggaggacatcatccggaaggccctgatgggcaacctg
gaagaaaggccagaggagcaccagggagggcctcagcccagctgtaacacccctagcaac
gaggcccgccaggaggccaacccctcacctatcatgggtaagcagaaactgcagagcaaa
gccaacagccggaagtccaagtcgcccaacccaggtcaggcatacgcagcagcagcccag
acagcaggaggggagcggccctcgtcagtctcctccgtccactcagagggagactaccac
cagcaggccccgggctgggcctgggaggaccggccctcgtccacaggctctatgcagttc
ccctataaccccctgaccatgcgcatgctgagcagcacgccccccacctccatggcctcc
ccctccatgcaggcccagcagcccccaccaggaggccctctggggtcccagcagcagcgt
gtgtgggagcgggagcccctactgtcggagcagtatgagaccttgtcagacagcgatgac
tga
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integrated database retrieval system
