Salvelinus fontinalis (brook trout): 129818112
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Entry
129818112 CDS
T11136
Symbol
ykt6
Name
(RefSeq) synaptobrevin homolog YKT6
KO
K08516
synaptobrevin homolog YKT6
Organism
sfon Salvelinus fontinalis (brook trout)
Pathway
sfon04130
SNARE interactions in vesicular transport
sfon04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
129818112 (ykt6)
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
129818112 (ykt6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sfon04131
]
129818112 (ykt6)
Membrane trafficking [BR:
sfon04131
]
SNARE
VAMP, Ykt6, Sec22 (R)
Ykt6
129818112 (ykt6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Synaptobrevin
Longin
MA3
Motif
Other DBs
NCBI-GeneID:
129818112
NCBI-ProteinID:
XP_055729670
LinkDB
All DBs
Position
21:complement(7185816..7200914)
Genome browser
AA seq
198 aa
AA seq
DB search
MKLFSLSVLYKGTTKSNLLKAAYDLSSFSFFQKSSVQEFMTFTSDLIVQRSSIGSRASVK
EQEYLCHVYVRNDSLGAVVIADGEYPSRVCFTLLDKVLEEFSRQVSSIDWPSGSPDTVHY
TALDSYLAKYQNPREADAMSKVQAELDETKIILHNTMESLLERGEKLDDLVQKSEHLGNQ
SKAFYKTARKQNSCCEVM
NT seq
597 nt
NT seq
+upstream
nt +downstream
nt
atgaagcttttcagtctgagtgtgctgtataaagggaccaccaagtctaacctactgaaa
gctgcctacgacctgtcatccttcagcttcttccagaagtccagtgttcaggagttcatg
acattcaccagtgacctcatagttcaacgctcgtctatagggagccgagcctctgtcaaa
gaacaagagtacctgtgtcacgtgtatgtgaggaacgactccctgggtgcggtggtgatt
gctgacggagagtatccctctagagtgtgcttcaccctactggataaggtgctggaggaa
ttttccagacaggtgagcagtatagactggccctctggttctcctgacactgtccactat
actgccctggacagctacctcgccaagtaccagaatcctcgggaggcggacgcaatgagt
aaagtacaagctgagctggacgaaaccaaaataattctgcacaacactatggaaagtctg
ttggagagaggagagaagctggatgatctagtccagaagtcagaacacctggggaaccag
tctaaagccttctacaagacggcgcggaagcagaactcttgctgtgaggtcatgtga
Salvelinus fontinalis (brook trout): 129826739
Help
Entry
129826739 CDS
T11136
Name
(RefSeq) synaptobrevin homolog YKT6
KO
K08516
synaptobrevin homolog YKT6
Organism
sfon Salvelinus fontinalis (brook trout)
Pathway
sfon04130
SNARE interactions in vesicular transport
sfon04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
129826739
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
129826739
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sfon04131
]
129826739
Membrane trafficking [BR:
sfon04131
]
SNARE
VAMP, Ykt6, Sec22 (R)
Ykt6
129826739
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Longin
Synaptobrevin
SLM4
Motif
Other DBs
NCBI-GeneID:
129826739
NCBI-ProteinID:
XP_055743755
LinkDB
All DBs
Position
28:complement(42540608..42547714)
Genome browser
AA seq
198 aa
AA seq
DB search
MKLYSLSVLHKGATKSNLLKSAYDLSSFSFFQRSSVQEFMTFTSALIVERSAHGSRASVK
EQEYLCHVYVRNDSLSAVVIADSEYPQRVAFTLLDKVLEEFSRQVDSIDWPSGNPETINY
KALDIHLAKYQNPREADAMTKVQAELDETKIILHNTMESLLERGEKLDDLVQKSEHLGNQ
SKAFYKTARKQNSCCEVM
NT seq
597 nt
NT seq
+upstream
nt +downstream
nt
atgaagctgtacagcctcagcgtcctccacaaaggagcgactaaatccaacctccttaaa
tctgcctatgacctatcctcctttagcttcttccaacgctcaagtgtgcaagagttcatg
accttcaccagcgccttgattgtggagcgttctgcacacggcagccgagcctcagtcaaa
gaacaagagtacctgtgccacgtgtatgtgaggaatgacagtctgagtgcagtggtgata
gcagacagcgagtaccctcaaagggtcgccttcacactactagacaaggtgctagaggag
ttctccagacaagtggacagcatagactggccatctggaaaccctgaaaccatcaactac
aaagctctggacatccacctggccaagtaccagaaccccagagaggcagatgctatgacc
aaagtgcaggctgaactggacgagacaaagattattctgcacaacacaatggagtctctg
ttggaaagaggggagaagctggatgatctggtgcagaagtctgaacacctggggaaccag
tctaaagccttttataagactgcacggaagcagaactcatgctgcgaggtcatgtaa
Salvelinus fontinalis (brook trout): 129853806
Help
Entry
129853806 CDS
T11136
Name
(RefSeq) synaptobrevin homolog YKT6-like
KO
K08516
synaptobrevin homolog YKT6
Organism
sfon Salvelinus fontinalis (brook trout)
Pathway
sfon04130
SNARE interactions in vesicular transport
sfon04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
129853806
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
129853806
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sfon04131
]
129853806
Membrane trafficking [BR:
sfon04131
]
SNARE
VAMP, Ykt6, Sec22 (R)
Ykt6
129853806
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Longin
Synaptobrevin
SLM4
Motif
Other DBs
NCBI-GeneID:
129853806
NCBI-ProteinID:
XP_055776195
LinkDB
All DBs
Position
4:42123180..42130061
Genome browser
AA seq
198 aa
AA seq
DB search
MKLYSLSVLHKGATKSNLLKSAYDLSSFSFFQRSSVQEFMTFTSALIVERSAHGSRASVK
EQEYLCHVYVRNDSLSAVVIADSEYPQRVAFTLLDKVLEEFSRQVESMDWPSGNPDTINY
KALDIHLAKYQNPREADAMTKVQAELDETKIILHNTMESLLDRGEKLDDLVQKSEHLGNQ
SKAFYKTARKQNSCCEVM
NT seq
597 nt
NT seq
+upstream
nt +downstream
nt
atgaagctatacagcctaagcgtcctccacaaaggagcgactaaatccaatctcctaaaa
tccgcatatgacctctcctccttcagtttcttccagcgctccagtgtccaagagttcatg
accttcaccagcgccttgattgtggagcgttctgcacacggcagccgagcctcagtcaaa
gaacaagagtacctgtgccatgtgtatgtgaggaatgacagtctgagtgcagtggtgata
gcagacagcgagtacccacaaagagtcgccttcacactactagacaaagtgctagaggag
ttctccaggcaagtggaaagtatggactggccatctggaaacccagacaccatcaactac
aaagccctggacatccacctggccaaataccagaaccccagagaggcagatgcgatgacc
aaagtgcaggctgagctagacgagacaaaaatcattttgcacaacaccatggagtctctg
ttggatagaggggagaagctggatgacctggtgcagaagtctgaacacctggggaaccag
tctaaagccttttataagactgcacggaagcagaactcatgctgtgaggtcatgtga
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