Salvelinus fontinalis (brook trout): 129818325 Help Entry 129818325         CDS       T11136                                  Symbol tnca Name (RefSeq) tenascin isoform X1   KO K06252   tenascin Organism sfon  Salvelinus fontinalis (brook trout) Pathway sfon04510   Focal adhesion sfon04512   ECM-receptor interaction sfon04518   Integrin signaling Brite KEGG Orthology (KO) [BR:sfon00001]  09130 Environmental Information Processing   09133 Signaling molecules and interaction    04512 ECM-receptor interaction     129818325 (tnca)    04518 Integrin signaling     129818325 (tnca)  09140 Cellular Processes   09144 Cellular community - eukaryotes    04510 Focal adhesion     129818325 (tnca)  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    00536 Glycosaminoglycan binding proteins [BR:sfon00536]     129818325 (tnca) Glycosaminoglycan binding proteins [BR:sfon00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    129818325 (tnca) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  EGF_TEN fn3 EGF_Teneurin Fibrinogen_C EGF_Tenascin EGF_2 Fn3_Dep-1_3rd DUF7949 EGF FN3_DSCAM-DSCAML_C Pur_ac_phosph_N hEGF Fn3_VIN3 Fn3_Dep-1_1st Motif Other DBs NCBI-GeneID:  129818325 NCBI-ProteinID:  XP_055730070 LinkDB All DBs Position 21:15844326..15894021 Genome browser AA seq 1540 aa AA seqDB search MSTKSILGCLFLTLLFSLCQSGLVRKILRHKRATLTAPGGDNITLPSADQPVIFNHVYNI NVPASSLCSVDLDAPGSTSLEPQDAVPPSGLHTTEHTMDGQNQIVFTHRINIPQQACACT EGFPDLKDLLSRLEMLEGELSTLRDQCTTGESGFCSAQPVTGEVGTKPYCNGRGNYSADT CGCICKPGWKGSNCTESECPNDCQDQGRCVDGKCICFEGFGGNDCLLEVCKVDCGENGQC IGGVCICPEGFTGEDCSQTDCLNNCLGRGKCVDEECVCEEPWTGSDCSELICPNDCYDRG RCVNGTCYCEEGFTGEDCGETTCPSDCMSHGFCVDGQCVCSSGYTGDDCSKLTCPGDCNN RGTCFNGMCICDAGYQGEDCSQLACPNNCHNRGQCVNGQCHCDVGYQGEDCSELSCPNNC LNRGRCVNGQCVCDEGFGGEDCSIKTCPSDCYGRGDCVDGQCVCYAGFTGEDCSELSCPN NCLNRGRCVDGQCVCDEGFTGEDCSEKRCPNDCLGQGYCVDGKCACQDSYAGDDCSGLTC PDNCNNRGRCVNGKCICEEGYVGDNCGDLSCLNNCQDKGRCVNGQCLCDEGYIGEDCSEV SPPKDLTVTEVTTETVDLTWNNEMLVTEYLITYVPNGPGGLYQEFTVGGDKTDATVSELE PGIEYLINVYAILSNKKSIPISARVATYLPEPEGLKFKSVRETSIEVLWDQLDIPFDAWE LYIRNTKEESGKTLTTLPSSQTLYEQSGLGPGQEYEVSVGVIKNNTRGPQSTKIITTRID GPRQVEVRDVTDSSGLVTWFHPVAQVDGVTVSYGPSSDPTERTSVDLSTTDKQYSIDSLS PDTEYQVSLVSRRGNSTSDPVTEIFTTDLDAPKDLQPLGQTDNSVTLEWRNSRADVDSYR VKYSPISGGSHGEEVFPRGSGDNTQATITGLKPGTEYGIGVTVMKNERESLPATTNAATN LDGPKDLEVSESTETSMTLVWKRPRAKIPVYRLVYISKDGRREEVEVPGTATSYNLNNLT PGMMYTITLVAERGSKKSTPATLSASTGLGAPRGIHFSEVTESSAIVHWNMPRARVDSYR IIYVPLQGGSPMTVLADGTKTQALLPNMFPGVTYQVTIFAGKGLEESDPGAENITTALDR PQALSAVNVTDTTALLLWQPAQATVDGYVITYSADSVTPVMEHVSGNTVEFEMGSLVPAT HYTVGVYAMREAQKSGTITTEFTTDVDSPHDLVASNVQTDSATLTWKPPRAAITGYILTF TSPDGTVREVVLSPTATSYSMSDLSGSSEYSVRLQAIAGAQRSRHVTNVFTTIGGLYRYP KDCSQALLNGDTISGTYNIYLGGEESQPIQVYCDMITDGGGWMVFLRRQNGNLEFFRNWK NYTGGFGDMNDEFWFGLANLHKMTASGQYELRVDLRDNGKSAYAQYDKFTIAEPRSRYKL YLGRYSGTAGDSLIYHHGRPFSTYDNDNDIAVTNCALSYKGAFWYKNCHRVNLMGKYGDN SHSKGINWFHWKGHEYSIQFVEMKIRPVNFRNVESRRKRS NT seq 4623 nt NT seq  +upstreamnt  +downstreamnt atgagtactaaaagcattctaggctgcctcttcctgactctccttttcagcctctgccaa tctgggctggtgagaaaaatacttaggcataaacgggcgactctgacagccccgggcgga gacaacataaccctccccagtgctgaccagccagtgatcttcaaccatgtctataacatc aacgtccccgctagctccttgtgctcagtggacctggatgctccaggaagtaccagcctt gagccccaggacgcagttccgccatcaggcctccacaccaccgaacataccatggatggg cagaaccagattgttttcacccaccgcattaacattcctcagcaggcgtgtgcatgcacc gaagggttcccggatttgaaggacctcctgagcaggttggagatgctggagggagagctg tccacgctgagagatcagtgcactactggagaatctggcttctgcagcgctcagccagtc acaggtgaggtggggaccaagccttactgcaatggccgtggcaactacagtgcagacacc tgtggctgtatttgcaagcctggctggaagggatccaactgcactgagtctgaatgcccc aatgactgccaggaccaaggtcgatgcgtagacgggaaatgcatctgcttcgagggcttt ggcgggaacgactgtttgcttgaggtttgcaaagtggactgtggtgagaacgggcaatgc attggcggggtctgcatctgtcccgagggtttcactggagaggactgttctcagacggac tgcctgaacaactgcctaggccgtggaaagtgtgttgatgaggagtgtgtgtgtgaagag ccctggacgggttctgactgctcggaactcatctgccccaacgactgctatgaccgtgga cgctgcgtcaatggaacctgctactgcgaagaaggtttcaccggggaggactgtggggag acaacctgccccagcgactgcatgagtcatggtttctgtgtggacggccagtgtgtctgc agctctggctacaccggagacgactgctccaagctcacctgccccggtgattgcaacaat agaggtacctgcttcaatggcatgtgtatctgcgatgctggctaccaaggagaagactgt agccagctggcttgccccaacaactgccacaacagggggcagtgtgtcaatgggcagtgc cactgcgacgtaggctaccagggagaggactgctctgagctctcctgccccaataactgc ctcaaccggggccgctgtgtcaacggacagtgtgtatgcgatgaaggctttggtggagag gactgtagtattaagacctgcccctcggactgctacggccgtggagactgtgtggacggc caatgtgtctgctatgctggcttcactggtgaggactgcagcgagctgagctgccccaac aattgcctgaaccgcggacgctgcgttgacgggcagtgcgtctgcgatgagggcttcaca ggggaagactgcagtgagaagcgctgtcccaatgactgcctgggccagggatactgtgtg gatggaaaatgtgcctgccaggacagctatgcgggtgacgactgctctggactcacctgc cctgataactgcaacaacagggggcgctgtgttaatgggaagtgcatttgtgaggaggga tacgtgggagacaactgcggagatctgagctgcctcaacaactgccaggacaaaggccgc tgtgtgaatggacaatgtctatgtgatgagggatacatcggagaagactgctcagaagtt tcccctccaaaggacctgactgtaacagaggtcaccactgagacagtggacctgacctgg aataatgagatgctggtgacagagtatctgatcacttatgtgccaaatggtcctgggggt ctgtatcaggagttcacagtgggcggagacaagactgatgccactgtcagcgagctggag cctggcatcgagtacctgatcaacgtctatgccatcctcagcaacaagaagagcatccca atcagcgccagggtggccacatatctgccagaaccagaaggcttgaagtttaaatcggtg agggagacctcaatagaggtgctgtgggatcagctggacattccttttgatgcctgggag ctctacatccgcaacacgaaagaggagagtgggaagaccctgaccacccttccatcctcc cagaccttgtatgagcagtccgggcttggtcctggtcaggagtacgaggtttcagtgggc gtcatcaagaacaataccaggggacctcagtctactaaaatcatcactaccaggattgat gggcccaggcaggtagaggtgcgtgatgtgacagacagctcaggattagtcacctggttc catcccgtggctcaggtggatggtgtcaccgtgtcctacggccccagctccgaccccaca gagaggaccagcgtggacctgtccaccacagacaaacagtacagcattgacagcctcagc ccggacactgagtaccaggtgtccctggtctccaggaggggaaacagcaccagcgatcca gtcactgagatattcaccacagacctggacgctcccaaggacctgcagccactgggccag acagacaacagcgtcacactggagtggagaaacagccgggcagacgttgacagctacagg gtgaagtacagccctatctctgggggttcccatggcgaagaggtgttcccccgtggatca ggagacaacactcaggcaactatcactggattgaagccgggtacagagtacggaattggt gtgaccgtcatgaagaacgagagggagagcctgcctgccaccacaaacgcagcaaccaac cttgatgggcccaaggacttggaagtgagcgagtccacagagaccagcatgacactggtg tggaagagaccccgagccaagatccccgtctacaggctggtgtacatctccaaggatggc cggagggaggaggtggaggtccctggaacagccacctcctacaacctaaacaacctgacc cctggcatgatgtacactatcaccctggttgctgagaggggctcaaagaagagcacacct gccaccctgtccgcatctacaggcctgggcgctccaagaggcatccacttctctgaagtg actgagtcctcggccatagtccactggaacatgcctcgtgccagagtggatagctaccgc atcatctatgtgcctctccaaggaggcagcccaatgacagtgctagcagatgggactaag acccaggccttgttgcctaacatgtttccaggagtgacctatcaggtcaccatctttgct gggaagggcctggaggagagtgacccgggggcagagaacatcaccacagctctggacagg cctcaagctctttctgctgtcaacgtcactgacacgaccgccctgctgctatggcaacca gctcaggccaccgtcgatggctacgtcatcacctacagcgcagactcagtgaccccagtg atggagcacgtttctgggaacacggtggagtttgagatgggttccctagtccctgccacc cactacacagttggggtgtacgccatgagggaggcacagaagagtggcaccatcaccact gaattcacaacggatgtggattctcctcatgacctggtggccagtaacgtccagacagac agtgccactctcacctggaagcctccgcgtgccgccatcaccggatacatcctcaccttc acctcacccgacggcacagtccgggaagttgtcctgagccctacagccacatcgtacagc atgagtgatctgagtggctcttcagagtacagcgtcaggctacaggccatcgctggagcc cagcggagccgccacgtcaccaatgtcttcaccaccattggagggttatacagataccct aaggactgctcgcaggctctgctgaatggagacacgatctctggcacttacaacatctac ctgggaggggaagagagccagcccatccaggtctactgtgacatgatcacggacggagga ggatggatggtgttcctgaggcgccagaatggaaatctggagttcttcaggaactggaag aattacaccggtggctttggggacatgaatgatgaattctggtttggtctggccaacctc cacaagatgacggcatcaggccagtacgagctgcgtgtggacctgagggacaacgggaag tcggcctacgctcagtatgacaagttcaccatcgcagagccacgtagccgctacaagttg tacttaggaagatacagcggcacagcaggtgactctttgatctatcaccatggtcggccc ttctccacgtacgacaatgacaacgacattgcagtaaccaactgtgcactgtcctataag ggtgccttctggtacaagaactgccatcgtgtcaacctcatgggaaaatatggtgacaat agtcacagcaagggtatcaactggttccattggaagggacacgagtattcaatccagttc gtcgagatgaagattagacccgtcaacttcagaaacgttgaaagccgacggaaaagatca tag

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