Salvelinus fontinalis (brook trout): 129818346
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Entry
129818346 CDS
T11136
Name
(RefSeq) voltage-dependent N-type calcium channel subunit alpha-1B-like isoform X1
KO
K04849
voltage-dependent calcium channel N type alpha-1B
Organism
sfon Salvelinus fontinalis (brook trout)
Pathway
sfon04010
MAPK signaling pathway
sfon04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
129818346
04020 Calcium signaling pathway
129818346
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
sfon04040
]
129818346
Ion channels [BR:
sfon04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
129818346
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Gene cluster
GFIT
Motif
Pfam:
Ion_trans
GPHH
Ca_chan_IQ
PKD_channel
Phage_TAC_15
Motif
Other DBs
NCBI-GeneID:
129818346
NCBI-ProteinID:
XP_055730122
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All DBs
Position
21:17556250..17765799
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AA seq
2249 aa
AA seq
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MSERLDDTEPYFIGIFCFEAGIKIIALGFAFHKGSYLRNGWNVMDFVVVLTGILATVGSD
FDLRTLRAVRVLRPLKLVSGIPSLQVVLKSIMKAMVPLLQIGMLLFFAILMFAIIGVEFY
MGKFHSTCFTVDTGERAAAFPCGTEAPARMCPNSTECTEYWIGPNYGITNFDNILFAVLT
VFQCITMEGWVDILYNANDASGNTWNWLYFIPLIIIGSFFMLNLVLGVLSGEFAKERERV
EKRQDFLKLRRQQQIERELTGYLEWICKAEEVLLAEEDENAEEKSPLDGAWYKRKQNLPV
LKRGKVKKRKNDLIGAEEGEDHFTDMSSVAPPGSPFGRASVKSSKLESSSYFRRKERRMR
FFIRRMVKAQSFYWIVLCLVGLNTLCVAIVHYDQPEWLTTALYLAEFVFLGLFMSEMSLK
MYGLGARNYFHSSFNCFDFGVIIGSILEVVWSMIKPGASYGISVLRALRLLRLFKFTKYW
NSLRNLVVSLLNSMKSIISLLFLLFLFIVVFALLGMQLFGGQFNFEEETPTTNFDTFPAA
ILTVFQILTGEDWNAVMYHGIESQGGVRRGMFSSVYFIVLTLFGNYTLLNVFLAIAVDNL
ANAQELTKDEEKQEEEANKKLALQKAMEVKEVSPMSAANISIAAFVKQNRDALSRSSSVS
SVQSPKEQQRANKIMSVWEQRTNQLRRNNLRASSEALFNELEPEERLRVSSALHLRSDMK
THNDRPLVVEPGNGDKPRPPEEDRDGAGDAHGPQPRKHYRHRERIGENGESRHHTHHSRS
WDHYHPDGPRSKEVKGERSHSREGGQGHRHHHQAGSPEEGVNGGGEGREDRHHHSDRQGD
GVLATRDRLESRGHREENGERRKHRSRIVRAQSTLDGDECRENGERNGDRDQGHRDRQTN
SQGESLATSPVQPPAGLQAGEKQEDADNQKNSHRASQAGLNSNTVHIPVTITAPSRETTI
IPMDNIDCESLPLNEEKKDLEQELKNGPKHILPYSSMFVFGQTNPVRRLCHYVVNLRYFE
MCILSVITMSSIALAAEDPVQANAPRNNVLKYLDYVFTGVFTFEMVIKMIDLGLLLHPGS
YFRDLWNILDFIVVSGALVAFACSGTKGKDINTIKSLRVLRVLRPLKTIKRLPKLKAVFD
CVVNSLKNVLNILIVYMLFMFIFAVIAVQLFKGKFFYCTDESKGLEKDCRGKFLDYDGDE
VAAQDREWRKYEFHYDNVLWAFLTLFTVSTGEGWPMVLKHSVDATYEDEGPSPGFRMETS
IFYVVYFVVFPFFFVNIFVALIIITFQEQGDKAMSECSLEKNERACIDFVINAKPLTRYM
PADKQSFQYKMWQFVVSPPFEYSIMTMIALNTVVLMMKFHGAPELYEAMLKYLNIVFTAL
FTLECILKIIAFGPLNYLKEAWNVFDFVTVLGSITDILVTEMKDKLINLSFLRLFRAARL
IKLLRQGYTIRILLWTFVQSFKALPYVCLLIAMLFFIYAIIGMQVFGNIELNEESAINHH
NNFQTFFQALMLLFRSATGEAWHEIMLSCLSNRPCDKLSGSGGKECGSDFAYFYFVSFIF
LCSFLMLNLFVAVIMDNFEYLTRDASILGPHHLDEFIRVWAEYDPAACERICYQDMYKLL
RFISPPLGLGKKCPNRVAYKRLVKMNMPIADDNTVHFTSTLMALIRTALEIKLASGVLAQ
RLCDADLRKDISRVWPNLPQKTIDLLVTPYKNDEFNELLCPFAVVNRELTVGKVYAALMI
FDYYKQNRAKRLEQQLGLDFTGTIKNKKGPAFFRHMPMTHMQEEGTTVSRANPLPSSQPE
PESQPEPMPSTTSLTNGEAVPSTRSPIKESGEQLSEEGQRSSSRKRILQRGQSEDVPYSN
KPQESVEMRQVENGADIGGYSGLDGHGRAASMPRLDSQYYRNHPRHLPGTYLAPIADISP
IRRSASTLASQCPQEMSLRDYTLERPSQAQAQASSAPGQAQDRPHHHHHHRCHRRRDKDR
DKKQKSLDRATSVQPSSTACSSVDPPVEGLTRERAREHDRGRPHERRHQSAAGETKRYYS
CERYVGREHCHTKSAGPSRSTSPGETHDLGLFKQRIGMSKGSQVVLTFGSSPSCRGRRQL
PQTPLTPRPAVAYKTGNSLPMQFGATGQQSFLSRGLSERDALLESPPIPVTLIGSDPNLS
PCLRNAPPRRLPEEPDNFQDAVSNHGGSHSPRIIASASHGAAGPSSAPAPQGRGGIPNGY
HFTLGVNAVSSSSPRGTGSFREKEEDDWC
NT seq
6750 nt
NT seq
+upstream
nt +downstream
nt
atgtcagaacgtctggatgacacagagccctactttattggaatattctgtttcgaggct
ggcattaagattatcgccttgggctttgcatttcacaaaggctcgtacctccgcaacggc
tggaacgtaatggactttgtggtcgtcctcactgggatcctggccacggtgggctcagac
tttgacctgaggactctgcgagcggtgagagtactgagaccactcaaactggtgtctggc
atccccagtcttcaggtggtattgaagtctatcatgaaggccatggtgcctctgctccag
ataggcatgctgctcttcttcgccatactcatgtttgccatcatcggagtggagttctac
atgggcaagttccactccacctgcttcactgtcgacactggtgagcgagcagcagcgttc
ccctgtggtacggaggccccagccaggatgtgtcctaatagtacagagtgtacagagtac
tggatcggccccaactacggcatcaccaactttgacaacatcctgtttgccgtgctcacc
gtcttccagtgcatcaccatggagggatgggtggacatcctctacaatgctaacgatgcc
tcggggaacacctggaactggctctacttcatccccttgatcatcatcggatccttcttc
atgctcaacttggtgctgggtgtcttatcaggggagtttgccaaagaaagagagcgtgtg
gagaagaggcaggactttctaaagctgcgcagacagcagcagatagagagagagctgacg
ggatacctggagtggatatgcaaggcagaggaggtgctgctggcggaggaggatgagaac
gcagaggagaagtcccctctggatggtgcgtggtacaagaggaaacagaacctcccagtg
ttgaaacgaggcaaggtcaagaagaggaagaatgacctgattggtgctgaggagggagag
gatcacttcactgacatgtcctctgttgcccccccaggctctccgtttggccgggccagc
gtgaagagcagtaagctggagagctcgtcctacttccgccgcaaggagaggagaatgcgt
ttcttcatccgtcgcatggtcaaagcccagagcttctactggatagtactgtgtctggtg
ggcctcaacacactgtgtgtggccatcgtccactacgaccagcctgagtggctcaccact
gccctctacctggcagagtttgtgttcctgggtctgttcatgtctgagatgagcctgaag
atgtacggcctgggagccaggaactacttccattcctctttcaactgcttcgactttggt
gtgataatagggagtatacttgaggtggtgtggtctatgatcaaaccaggggcatcctat
ggcattagtgtgctgagggctcttcgtctgctcaggttattcaaatttaccaagtactgg
aactccctgaggaacctggtagtgtctcttctcaactcaatgaagtccattatcagcttg
ctcttcctcctcttcctcttcatcgttgtctttgccctgctgggcatgcagctcttcgga
ggacagtttaattttgaagaggagacgccgacgaccaacttcgacactttcccggcggcc
attctcaccgtcttccagattttgactggcgaggattggaatgcagtgatgtatcatggt
attgagtcccaggggggcgtacggcggggaatgttctcctcggtctacttcatcgtcctc
acactctttggaaactacacgctcctgaacgtcttcttagctatcgccgtcgacaacctc
gccaatgcacaggagctcaccaaggatgaggagaagcaggaggaagaagccaataagaag
ctggccctgcagaaggccatggaggtgaaggaggtcagccccatgtcagcagccaacatc
tctatcgctgcttttgtaaagcaaaatcgagatgcactctctcgcagctcgtccgtctcc
agcgtgcagtcacctaaggagcagcagagagccaataagataatgtcagtgtgggagcag
cgcaccaaccaactgcgtcgaaacaacctgagagctagctccgaggctctgttcaacgag
ctggaacccgaggagcgtctgcgtgtctcctccgccctccacctgcgctccgacatgaag
acccacaatgaccgccccctagtggtggagccaggtaacggggacaaaccccgacccccc
gaggaggacagagacggagcaggagacgcccacggcccacagccacgcaagcactaccgt
caccgggagaggatcggggagaatggggagagcaggcatcacacccaccacagccgcagt
tgggaccactaccacccagacgggccccggtccaaagaggtcaagggggagaggagccat
agtcgagagggggggcagggccacaggcaccatcaccaggctggatccccagaggagggg
gttaacggagggggagagggaagggaagaccgccaccaccactccgacagacagggggac
ggggttctggctaccagggacagactggagagcaggggccacagggaggagaacggagaa
aggaggaagcaccgctcacgcatagtcagggcccagtcaacactggatggagacgagtgc
agagagaacggagagagaaatggagacagggaccaaggacacagggacaggcagaccaac
tctcaaggggagagcttggccaccagtcctgtgcagcctcctgcaggtctgcaggctgga
gagaagcaagaggatgctgacaaccagaagaacagccacagagccagccaggcaggcctg
aacagcaacactgtccacatccctgtcaccatcaccgccccatccagagagaccaccatc
atacccatggataacatagactgtgagagcctccccctgaacgaggagaagaaggacttg
gagcaggagctgaagaacggccccaaacacattctcccctacagctccatgtttgtgttt
ggacagaccaacccggtgcgtcggctgtgccactacgtggtgaacctgcgttactttgaa
atgtgtatactgtcggtcatcaccatgagcagcatagccctggctgcagaggaccctgtg
caggccaatgcaccacgcaacaacgtgctcaaatatctggactacgtcttcacaggagtg
ttcacctttgagatggtgattaagatgatagacctgggactgctcctccatcctggttct
tacttccgggacctgtggaacatcctggactttattgtggtcagtggagctctggtggcg
ttcgcctgctcaggaactaaaggcaaggacatcaacaccatcaagtctctcagggtgctg
cgagttctaaggcctctgaagaccatcaaacgactgccaaaactcaaggctgtgtttgac
tgtgtggtcaactctctgaagaacgtgctcaacatcctcattgtctacatgctcttcatg
ttcatcttcgctgtgatcgctgtgcagctgttcaagggcaagttcttctactgcaccgac
gagtctaaaggtctggagaaggactgcaggggtaagtttctcgactatgacggtgatgaa
gtggcggcccaggatcgtgagtggaggaagtatgagttccattatgacaatgtgctgtgg
gccttcctcaccctattcaccgtctccaccggggagggctggccaatggtcctaaagcat
tctgtggatgccacctatgaggatgagggtcccagcccaggctttcgtatggagacttct
atcttctatgtggtctactttgtggtctttcccttcttctttgtcaacatcttcgtggct
ttgatcatcatcaccttccaggagcagggagacaaggccatgtcagagtgtagtctggag
aagaacgagagagcttgtatcgactttgtcatcaacgccaagcctctgacgcgctacatg
ccagcagacaagcagtcgttccagtataagatgtggcagtttgtggtgtcgccgcccttt
gagtactccatcatgaccatgatcgcactcaacactgtggtgctgatgatgaagtttcac
ggtgctccggagctgtatgaggccatgctgaagtacctgaacattgtgttcacagctctc
ttcacactagagtgcatcctcaagatcatcgctttcggaccactgaattacctgaaggaa
gcttggaacgtgtttgactttgtgacagtattggggagtatcacagacatcttggtcaca
gagatgaaggacaagctgatcaatctgagtttcctgaggctgttcagggcggccaggctc
atcaagctgctgaggcagggctacaccattcgcatcctgctatggacctttgtccagtcc
ttcaaggccctaccatacgtctgcctcctcatcgctatgctcttcttcatctacgccatc
atcggcatgcaggtgtttggaaacattgagctgaatgaggaatcagccatcaatcaccac
aacaacttccagaccttcttccaggctctgatgcttctgttcaggagtgcaacaggtgag
gcgtggcatgagatcatgctgtcgtgtctgagtaaccgtccatgtgataagctgtcaggg
tccggagggaaggagtgcggcagtgactttgcttatttctactttgtctccttcatcttc
ctctgctcctttctgatgctcaatctgtttgtggcggtcatcatggacaactttgagtac
ctgaccagagacgcctctatcctggggcctcaccacctggacgaattcatccgtgtttgg
gccgagtacgaccctgctgcctgcgaaaggatatgctatcaggatatgtacaaattgtta
cgttttatctcgcctcctctcggcttagggaagaagtgtcctaatagggtggcctacaag
cgattggttaagatgaacatgcccattgccgatgacaacacggtgcacttcacgtccact
ctgatggcgctcatccgcactgctctggagatcaaactggcgtctggagtcctggcccag
cgtctgtgtgacgctgacctgaggaaagatatctccagagtctggcccaacctgcctcag
aagactatcgacctgctggtcacaccatataaaaatgatgagttcaatgagcttctttgc
ccctttgcggttgtaaaccgagagctgacagtggggaaggtctacgctgccctcatgatc
tttgactactacaagcagaaccgggccaagagactggaacagcaactgggactggacttc
acagggacaattaagaataaaaagggcccagccttcttccgccacatgcccatgacccat
atgcaggaggaggggacaacagtctccagagccaatcccctgccatcctcccaacctgaa
ccagagtctcagccagagcccatgccatccaccacctctctaaccaatggggaagcagta
ccaagcactagaagtcccataaaagagtcaggagagcaactgtctgaggagggccagcgg
tccagcagtagaaaaaggattctacagaggggccagtcagaggacgtgccctactccaac
aaacctcaggaatcagtggagatgaggcaggtggagaacggtgctgatatagggggctac
tctggtctggatggccatggcagagcagcctccatgccaagactggactcccagtactat
cggaaccaccctcgtcacctacctgggacctacctggcacctattgctgacatcagtcct
atcaggcggtcggcgtccacgttggcttcccagtgcccccaggagatgagtctgagagac
tacaccctggagcggcccagccaggcccaagcccaggcctcctcggccccaggtcaagcc
caggacaggccccatcaccatcaccaccaccgctgtcacagacgcagggacaaggacagg
gacaagaagcagaagtcacttgacagggcaaccagcgttcagccttctagtacagcatgt
tcgtctgttgaccctcctgtggagggcttgaccagggagcgggcgagggagcatgaccgt
ggccggcctcatgagaggaggcaccaatctgcagccggggagacgaagcgttactactcc
tgtgagcgctacgtaggcagggagcactgccacaccaagtcagctggccccagccgctcc
acctcccctggagagacccacgacctaggcctcttcaagcagagaatcgggatgagtaaa
ggcagccaagtggtcctaacctttggatctagtccatcctgccgtgggcgcagacagctc
ccccagacccccctgaccccccgccccgccgtggcctacaagactggaaactccttgccc
atgcagtttggtgccacagggcagcagtcctttctcagtcgtggactctcggagcgtgac
gccctgctggagtcaccccccatacccgtcaccctcattggctcagacccaaacctgagc
ccctgtctgcggaacgcccctccacgcagactccctgaggagcctgacaacttccaggat
gctgtgagcaaccatggagggagccactcccctaggatcattgcctcagcctcccatggg
gctgctgggccctcttctgcacctgccccacagggccggggtgggatcccaaacgggtac
cacttcactcttggggtcaatgccgtttcaagctccagccccagagggactgggagtttc
cgtgagaaggaagaggatgactggtgctag
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integrated database retrieval system
