KEGG   Salvelinus fontinalis (brook trout): 129818363
Entry
129818363         CDS       T11136                                 
Symbol
snrpd3l
Name
(RefSeq) small nuclear ribonucleoprotein D3 polypeptide, like
  KO
K11088  small nuclear ribonucleoprotein D3
Organism
sfon  Salvelinus fontinalis (brook trout)
Pathway
sfon03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:sfon00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    129818363 (snrpd3l)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:sfon03019]
    129818363 (snrpd3l)
   03041 Spliceosome [BR:sfon03041]
    129818363 (snrpd3l)
   03032 DNA replication proteins [BR:sfon03032]
    129818363 (snrpd3l)
Messenger RNA biogenesis [BR:sfon03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    U7-dependent histone pre-mRNA processing factors
     129818363 (snrpd3l)
Spliceosome [BR:sfon03041]
 Complex A
  U1 snRNP components
   Sm proteins
    129818363 (snrpd3l)
  U2 snRNP components
    129818363 (snrpd3l)
 Complex B
  U1 snRNP components
    129818363 (snrpd3l)
  U4/U6.U5 tri-snRNP components
    129818363 (snrpd3l)
 Complex C
  U2 snRNP components
    129818363 (snrpd3l)
DNA replication proteins [BR:sfon03032]
 Eukaryotic type
  DNA Replication Termination Factors
   Telomerase complex (fungi)
    Sm core complex
     129818363 (snrpd3l)
SSDB
Motif
Pfam: LSM ATP-grasp_2 Kringle TSP9
Other DBs
NCBI-GeneID: 129818363
NCBI-ProteinID: XP_055730157
LinkDB
Position
21:complement(18565483..18569568)
AA seq 128 aa
MSIGVPIKILHEAEGHIVTCETNTGEVYRGKLIEAEDNMNCQMSNITVTHRDGRVAQLEQ
VYIRGSKIRFLILPDMLKNAPMLKSMKNKNQGTGAGRGKAAILKAQVAARGRGRGGGIGR
GTIFQKRR
NT seq 387 nt   +upstreamnt  +downstreamnt
atgtccattggcgtgcccatcaagattctgcatgaagcagagggtcacattgtgacctgt
gagaccaacactggtgaagtgtacagaggcaagctcattgaggctgaggacaacatgaac
tgccagatgtccaatatcactgtgactcatcgggatggccgtgtagcccaactagagcag
gtctacatccgtggcagcaagattcgcttcctgattttaccggacatgttaaagaatgct
cctatgttaaagagcatgaaaaacaagaaccagggcaccggagcaggaagggggaaggca
gccattctcaaagcccaggtggctgcaagaggacggggtcgtggcggaggaattgggaga
ggaaccattttccagaagaggcgatag

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