Salvelinus fontinalis (brook trout): 129818371
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Entry
129818371 CDS
T11136
Symbol
pus1
Name
(RefSeq) tRNA pseudouridine synthase A
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
sfon Salvelinus fontinalis (brook trout)
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sfon03016
]
129818371 (pus1)
Enzymes [BR:
sfon01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
129818371 (pus1)
Transfer RNA biogenesis [BR:
sfon03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
129818371 (pus1)
Prokaryotic type
129818371 (pus1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
DUF2344
Motif
Other DBs
NCBI-GeneID:
129818371
NCBI-ProteinID:
XP_055730169
LinkDB
All DBs
Position
21:18917941..18923222
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AA seq
392 aa
AA seq
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MMSEEGSGNMLIKPLKRVEEGNGESGENGHIRKKLKSVELTGNERKHPKRKVVLLLAYSG
KGYYGMQRNAGSSQFKTIEDELVTALIKSGCIPDNHGDDMKKMSFQRCARTDKGVSAAGQ
VVSLKLWMIEDVMEKINSNLPPQIRVLGLKRVTGGFNSKNSCDARTYSYMLPTVAFSPKD
YYTKNSAAFRLEPETLQRVNQLFGSYKGTHNFHNFTSQKAARDPSARRYITEMSCGEPFV
RGGAEFAEITVRGQSFMMHQIRKMIGLVIAVVKGYSGDEVLKRSWGEEKVDVPKAPGLGL
VLEKVHFDRYNKRFGGDGLHECLEWTEEEQAILAFKEEHIYPSIVETECQEGSMASWMAT
LPIHDFEATATGAQDKDREQDDEEGNRSDSAL
NT seq
1179 nt
NT seq
+upstream
nt +downstream
nt
atgatgagtgaagaagggtcaggaaatatgctgatcaagccactgaaacgagtggaggaa
ggaaatggagagtcgggtgagaatggacacatcagaaagaagctgaagtctgtagaactg
actggcaacgagaggaaacaccccaaaagaaaagtggtcctgcttttggcatattcaggc
aaaggttactacggtatgcagagaaatgctggatcctcccagttcaaaaccattgaggat
gagctagtcacagcactgattaagtctgggtgcatcccagacaaccatggagatgacatg
aaaaaaatgtcgttccaaagatgtgcgagaacagacaagggtgtttctgcagcaggtcaa
gtggtctctctaaaactgtggatgattgaagacgtaatggaaaagataaactccaatctt
ccaccacagatcagagtgctgggtctgaaacgagtgactgggggcttcaattctaaaaac
agctgtgatgcccgcacatactcctacatgcttcccactgtggccttctccccaaaggac
tattacaccaagaattccgctgcattccgccttgagccagagacactgcagagagtaaac
cagctgtttggcagctacaagggcacccataactttcacaacttcacctctcagaaggcc
gcacgggaccccagcgcccgtcgctacatcacagagatgtcctgtggcgagccctttgtg
cgtggcggcgcagagttcgcagagattactgtgcgtggccagagcttcatgatgcatcag
atccggaagatgatcggcctggtgatagctgtggtgaagggctattcgggggacgaagtg
ttaaagcgaagctggggtgaggagaaagtggacgtgcccaaagcccccgggctgggcctg
gtgctggagaaggtgcactttgacaggtacaacaagcggtttggtggggacggcctccat
gagtgcctggagtggactgaagaggagcaggccatcttggctttcaaggaggagcacatc
taccccagcattgtggagacagagtgccaggaagggtccatggctagctggatggccaca
ctgcccatacatgactttgaggcaactgcaacaggagctcaggataaggatagggagcag
gatgatgaggagggtaatagatcagattctgcactttga
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