Salvelinus fontinalis (brook trout): 129818418
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Entry
129818418 CDS
T11136
Symbol
smc5
Name
(RefSeq) structural maintenance of chromosomes protein 5
KO
K22803
structural maintenance of chromosomes protein 5
Organism
sfon Salvelinus fontinalis (brook trout)
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sfon03400
]
129818418 (smc5)
DNA repair and recombination proteins [BR:
sfon03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
SMC5-SMC6 complex
129818418 (smc5)
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
SMC_N
AAA_23
AAA_15
AAA_21
AAA_13
Tuftelin_like
IFT57
AAA_29
AAA_25
GCN5L1
CEP135_TSGA10_CC
Motif
Other DBs
NCBI-GeneID:
129818418
NCBI-ProteinID:
XP_055730249
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All DBs
Position
21:21124303..21152100
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AA seq
1074 aa
AA seq
DB search
MASAGKKKRISNVTNTQPSNNGAGSSSGTVGDGQVSGFVEGSIIRITMQNFLTYDHSIVY
PGPNLNMIVGANGTGKSSIVCAICLGLAGKTAILGRGDKVGLYVKRGCNKGSVEIELHKA
KGNLVINREIHVENNQSTWMLNGKHSSQKTVEEEVKALQIQVSNLCQFLPQEKVGEFAKM
TKIELLEATEKSVGPPEMYEFHCELKTFRTKERELENVCKEKASALEKFKQRNERNKHDV
ERYYEKKRHLDNIKMLEKKKPWVEYETARKELEGVKKSREDAKKQLKTVRESQAPMLKKI
QHIDSQLRPIENQMKDKTVSIREASQKCKQKQDQLDRKHREIEDIKQAFSLKQTEAVDRQ
KRISNTRRMIDDLRAELANVGDQSDVTPRINAVNAELRRIQEEKAKMEGEKADMRREKDN
LNGECRLLKNRLRSLDDMMKIKEEKLRGRSKDTYAAVQWLRQNKHIFSGNVYEPMMLVIS
VRNPNHAKYVENHIPFNDLRAFVFQKREDMEKFMMEVRDSQNLRVNSVFAPEESCATRAP
SRPIESLKRFGFFAYLRELFDAPEEVMSYLCNQYKVHDVPVGTDQTKAMIKTVIEEPYLK
VLYTAEEKYSLKKSFYSGKTSTSNSAVRPSQYLTMAVDAEEKRQLEEQIRTAEKSMQAID
VQMSAMQERTAKLDHCDNELRAQKKGLSEMKGKKRQLEQKISTKQDSLRQMEQGGIDLQK
AEEETKAQISAVNSQKVAIVAEFMAHMKLRAKLSMEKVYMALETVGMTAEKTKLETDCRE
GSAELRVLEQACSMLEQSKARLLEMCKGLMRRAREICNMDPGESAVPPDLHTAFSQLPDT
MDEIDAMLNEERSRAECFTGLSENVVDEYNRREQEIKNLEKELDEKSNALKTYRQNISEA
KERWLNPLKQLVEQINDKFSDFFRSMQCAGEVDLHSENEEEYDKYGIRIRVKFRSSTQLH
ELTAHHQSGGERSVSTMLYLMALQELNRCPFRVVDEINQGMDPVNERRVFDIVVRTACKE
TTSQYFFITPKLLQNLQYADEMTVLCVHNGPYMLPPNKWDEKAFTRRCVRRKGK
NT seq
3225 nt
NT seq
+upstream
nt +downstream
nt
atggcttctgcgggcaagaaaaaacgaataagtaacgtaacgaacacacaaccttcaaat
aatggagcaggttcgtcctctggtaccgttggagatggccaggtgtctggatttgtcgaa
ggatccataattcgcatcacaatgcaaaacttcctgacctacgaccactccatagtttac
cctggaccaaacctaaacatgattgtgggggccaatggaactggcaagtccagtattgtc
tgtgccatatgtctgggtctggcaggaaagactgccatcctgggcagaggggacaaggtt
gggctgtatgtgaagcgtgggtgcaacaaaggatcggttgagattgaactgcacaaggcc
aaggggaacctggtgatcaatagagagatccatgtggagaataaccagtcgacgtggatg
cttaatgggaaacactccagccagaagactgtggaggaggaggtgaaggctctacagatc
caagtgagcaacctttgccagtttctgccacaggagaaggtgggtgagtttgccaagatg
accaagattgagctgctagaggccacagagaagtcagtgggacctccagagatgtatgag
ttccactgcgagctcaagaccttccgcaccaaagagagggaactggagaatgtgtgcaag
gagaaggccagcgccctggagaagttcaagcagaggaacgaacggaacaagcacgacgtt
gaacgctactacgagaagaagagacacctggacaacatcaagatgctggagaagaagaaa
ccctgggtggagtatgagacggcccgtaaggagctggagggggtgaagaagtcaagggag
gatgccaagaagcagctgaaaaccgtgagggagtcccaggcccccatgctgaagaagatc
cagcacatcgacagtcagctgaggcccatcgagaaccagatgaaggacaagacggtcagc
atcagggaggcctctcagaagtgtaaacagaaacaggaccagctggaccggaagcacaga
gagattgaggatatcaagcaggccttcagcctgaagcagacggaggcggtggaccggcag
aagcgaatcagcaacacccggcgcatgattgacgacctgagggcggagctggccaacgta
ggcgaccaatcagacgtgacgccgcggatcaatgcggtgaatgcggagctgaggcgcatc
caggaagagaaagcaaagatggagggagaaaaggccgacatgcgtagggagaaggacaac
ttgaacggagagtgtagactgttgaagaacaggctgaggagtctggatgacatgatgaaa
atcaaggaggagaagctgagagggcgctccaaggacacctacgctgccgtccagtggctg
aggcagaacaaacacatcttcagtggcaatgtctatgaacctatgatgctagtgattagt
gtccgcaaccctaaccatgccaagtacgtggagaaccacattccattcaatgacctgcga
gcatttgtcttccagaagagggaagacatggagaagtttatgatggaggtgcgtgacagc
cagaacctgagggtgaattcagtcttcgctcctgaggaatcctgcgccacccgtgctccc
tcccgacccatcgagtctctgaagcgtttcgggttctttgcgtacctgcgggagctcttt
gatgctccagaagaggttatgagctacctctgcaaccagtacaaggtgcacgatgttccc
gtgggaacggaccaaaccaaagccatgatcaagacggtgattgaggagccctacctgaag
gtgctttacacagctgaggagaagtactccctgaagaagtccttttactcagggaagacc
agcaccagtaactctgccgtgcggccctcccagtacctcaccatggccgtggacgccgag
gagaaacgccagctggaggagcagatcaggacggctgaaaagagcatgcaggccattgat
gtccagatgagcgccatgcaggaacgtactgccaagctggatcactgtgacaatgagcta
cgtgcccagaaaaaggggctctcagagatgaagggtaaaaagagacagttggaacagaag
atcagtaccaagcaggacagtcttcggcagatggagcaggggggcattgacctacagaag
gctgaggaggagaccaaggcccagatctcagcagtcaactcccagaaggtggccattgtg
gctgagttcatggcccacatgaagctgagggctaagttgagtatggagaaggtgtacatg
gctctagagaccgtgggcatgacagcagagaagaccaagctggagactgactgcagggag
ggctcggccgagctcagggtcctagagcaagcgtgttccatgctggagcagagcaaggcc
cgtctgttggagatgtgtaagggcctgatgaggagggccagggagatctgtaacatggac
cctggggagagtgctgtacccccagacctacacacggccttcagccagctgcccgacact
atggatgagatagacgccatgttgaatgaggagaggtccagggcagagtgcttcactggc
ctcagtgagaatgtggtggatgagtacaacaggagagagcaggagatcaagaacctggag
aaagaactggatgagaagagcaatgccctgaaaacctacagacagaacatatcagaggca
aaggagcgctggctgaatcctctgaagcaactggtagagcagatcaatgacaagttcagt
gatttcttccgctccatgcagtgtgccggggaggtggacctgcattcagagaacgaggag
gagtatgataaatacgggatccgtatccgggtgaagttccgtagcagcacgcagctccac
gagctcacagcacaccaccagagtggaggggagcgcagtgtctcaacaatgctctacctc
atggccctgcaagagctcaaccgctgtcccttccgagtggtggatgagatcaaccagggt
atggacccagtcaatgaaaggagagtctttgacattgttgtacggacagcctgcaaggag
acaacctcccagtacttcttcatcacacccaagctccttcagaacctccagtatgcagat
gagatgactgtcctgtgtgtccataacggaccttacatgctgccccccaataagtgggat
gagaaggccttcaccaggcgctgtgtccgccgcaagggcaaatag
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integrated database retrieval system
