Salvelinus fontinalis (brook trout): 129818547
Help
Entry
129818547 CDS
T11136
Symbol
depdc5
Name
(RefSeq) GATOR complex protein DEPDC5 isoform X1
KO
K20404
SEA/GATOR complex protein SEA1/DEPDC5
Organism
sfon Salvelinus fontinalis (brook trout)
Pathway
sfon04150
mTOR signaling pathway
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09130 Environmental Information Processing
09132 Signal transduction
04150 mTOR signaling pathway
129818547 (depdc5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sfon04131
]
129818547 (depdc5)
Membrane trafficking [BR:
sfon04131
]
Autophagy
Other autophagy associated proteins
SEACIT/GATOR1 complex
129818547 (depdc5)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEPDC5_CTD
vWA_IML1
IML1_N
IML1_small
DEP
IML1_N_fung
Motif
Other DBs
NCBI-GeneID:
129818547
NCBI-ProteinID:
XP_055730529
LinkDB
All DBs
Position
21:complement(28468736..28500890)
Genome browser
AA seq
1606 aa
AA seq
DB search
MKNKTYKLVVHKKGFGGSDDELVVNPKVFPQVSLGDIIEIAHPTDEYSPLLLQVKSLKED
LQKETISVDQTVAQAFKLRAYQDVIVNIVDPKDVTLDLVELTFKDQYIGRGDMWRLKKSL
VSTCAYVTQKVEFAGIRAQASELWVKGEKVTCGYISEDTRVVFRSTSAMVYIFIQMSCEM
WDFDIYGDLYFEKAVSGFLSDLFAKWKERYCSHEVTVVLFSRTFYNAKTLEEFPEILRGS
IRQDHEGRFYEDFYRVVAQTERRDEWTSLLVTIKKLFIQYPVLVRLKEAVGFPSGHNSTA
AQGNYLEAINLSFNVFDKHYINRNFDRTGQMSVVITPGVGVFEVDRLLMILTKQRMIDNG
IGVDLVCMGEQPLHAVPLFKLHNRTVPGDSRLGDDYNLPHWINHSFYTSKSQNSCSCFTP
RIKLAGRKLHAEKFKNNKEHTLGAPKDENSLPIQVDYDAHDAQVFRLPGPSRAQRSTNFR
VVREREVSGRRSWGSADVSGVLGGGVSPPVRSCGPDEQRSLASDDSLGRVSNILLIPRLP
PAQYGEVSSSLGYTSTRELLEKMMESQRDSSAPGRFTVGSAESTLHVRPGGYTPQRALIN
PFAPSRMPMKLTSNRRRWMHTFPVGPSGEAIQIHHQTRQNMAELQGSEQRDPAHTSAELL
ELAYHEATGRRTASERRQAGENGLYSSGGMEEYTHGSPASSNSTGTPVNRGSSLEDFSSG
SPDPTLLLSAPPTVPSFCCTVGVDWKSLTTPACLPLTTDYFPEWQTLQNDYTEGCYDLLP
HTDLERRDDEAPVMSAPQVFEEFICQRLMQGYQIIVQPNKRKPQPAVAPPLSSSPLYTRG
LVSRRRPEEEESLYWLSMGRTFHKVCLKDKIITVTRYLPKYPYESAQIQYTYSLCPPHSD
AHFLSCWVEFGHERLEEYKWNYLDQYICSAGSEDFSLIDSLKFWRTRFLLLPAGGARRVA
DGEGHWDVYGEGVGTVAGREGMTGTGDWALLDGFIRFLEGLNRIRRRHRSDRIIRKGPAM
KGLQVTGPLSAYPPEPVAPPLGKKGTSALSALLELEQNQKTLEEQQQQGKPSAATSESST
VTMTTTYVDSPRKDAAFILDFIRSPRSSYIYHTQVSTDPAEGGATDKGGQVVAGVVATGG
AAAQATGDTGPSLATETSGQSGTGALCLSSSSTLMEILEAIKHPTTGVQLLPEQKGLPPN
CFISAEIVHWLVNNVEGVATQGMAVDIMQKMLDEGLVTHASGDAMRTFVYGFYFYRIVAE
KDGERGPTSQLPPPVVQGWSTAALEDFALFQRKWFEVAFVLEERRPCDLPAFLLPWLPSR
PASYASRHSSFSRSFGGRSQAAALLAATVPEQKTVTLDVDVNNRSDRTEWCSCYYHGNFS
LNAAFEVKLHWMAVTAAVLFEMVQGWHRKAASCGFLLVPVLEVPFALPSYLYGDPLRAQL
FIPLHVHRLLRDSSDNLFEGFEPETYWDRMQLFQEAILYRFGFVQDKFSASAFNFPSENK
PQYIHVTGTVFLQLPYSKRKYSSGQQRRRRNSTASASQGLFGSEELVGYYWAYNTMLTKA
WRTGVLGDEKLADRLLRDFTDFCANKDKRLVNFWDSCQEKMNASAP
NT seq
4821 nt
NT seq
+upstream
nt +downstream
nt
atgaagaataaaacatacaaacttgtggtgcacaagaaaggctttggaggcagtgatgat
gagctggtggtgaaccccaaggtgttccctcaagtttcccttggggacataattgagatt
gcacaccccacagatgaatacagccctctcttgctgcaagtgaagagtctcaaagaagac
ctccagaaagagacaatcagtgtggaccagacggtggcgcaagccttcaaactccgggca
taccaggatgtcattgtaaacattgtggatccaaaggatgtaactctggacctcgtagag
ctcacgttcaaagaccaatacattggaaggggagacatgtggcgactgaagaagagtctg
gtgagcacctgtgcttatgtgacccagaaagtggaatttgcagggatcagagcccaggcc
agtgagttatgggtgaaaggagagaaggtcacctgtggctacatcagtgaagacaccagg
gtggtgttcaggtcgacctctgccatggtgtacatcttcatccagatgagctgcgaaatg
tgggactttgatatctacggggatctctactttgagaaagcagtcagtggttttttgtct
gatctttttgccaaatggaaggagaggtattgcagccatgaagtgacagtggtgcttttc
tcacgcactttctacaacgctaaaaccttggaggagtttcctgagatattgagaggttcc
atcagacaggaccacgagggccgtttctatgaagatttctacagggtagtggctcagact
gagagacgtgatgagtggacctctctactggtcaccatcaagaagctcttcattcagtat
cctgtcttggtgcgactaaaagaagcggttggtttcccctccggccataactctactgct
gctcaggggaattaccttgaggccattaacctgtctttcaacgtctttgacaagcactac
ataaaccgcaactttgatcgcaccggtcagatgtctgtggtcatcaccccgggggtgggc
gtgtttgaagtggaccgactgctcatgatcctaaccaagcagcgcatgattgacaatggt
atcggtgtggacttggtgtgtatgggagagcagccacttcatgcagtgcctctatttaag
ctgcacaacaggacagtgcctggagactcacgactgggggatgactacaacctgccccac
tggattaaccacagcttttacacatccaaaagccagaactcctgcagctgcttcactcct
cgcatcaagctggcaggacgcaagctccatgcagaaaaattcaagaacaacaaagagcac
actcttggggctccgaaggacgagaacagccttcccatccaggtggactacgatgcccat
gatgcacaggtgttcagactccctgggccgtcccgagcccagaggagcaccaacttcagg
gtggtccgagagagggaagtgagtggaaggagaagctgggggtctgcggatgtgagtggg
gttctagggggcggtgtgtccccccctgtccgctcttgtgggcctgacgagcagcggagc
ctggcctctgatgacagcctgggcagggtgtccaacatcctgctgatcccccgtctgccc
ccagcccagtacggagaggtcagcagctccctgggctacaccagcaccagagagttgttg
gagaagatgatggaatctcagcgggactccagtgctccggggaggttcactgtggggagt
gctgagtccaccctccatgtgcgcccagggggctacacccctcagagggccctcattaac
cccttcgccccctcacgcatgcccatgaagctcacctccaaccgcaggcgctggatgcac
accttccctgtgggtccgtcaggagaggccatccagatccaccaccagaccagacagaac
atggctgaactgcagggcagcgagcagagagaccccgcccacacctccgccgagctcctg
gaactggcctatcacgaggccactggcagacggacagcctcagagagacgacaggcagga
gaaaatgggctgtactccagcggagggatggaggagtatactcatggcagcccagccagc
agcaacagcactggaacaccggtaaaccgtggctcctcgttggaggacttttcctctggc
agtccggatccaaccctgctgctgtctgcccccccgacagtgcccagcttctgttgcacg
gtgggggtagactggaaatctctgaccacacccgcctgtctgcctctcaccaccgactac
ttccctgaatggcagaccctgcagaacgactacactgagggctgctacgacctgctgcca
cacactgatctggagaggcgggatgatgaggccccggtgatgagtgcccctcaggtgttt
gaggagtttatctgtcagcggctgatgcagggctaccagatcatcgtccaacctaacaaa
aggaaaccccagcctgctgtggccccgcccctcagcagtagtccactctacaccagaggg
ctggtctctcggcgcaggccagaagaggaggagagtctgtactggctcagtatgggccgt
accttccataaagtctgcctgaaggataaaatcatcactgttacccgctaccttccgaag
tacccgtatgagtcggcccagatccaatacacctacagtctgtgtccccctcactctgac
gcccacttcctgtcctgctgggtggagtttggtcacgagagactggaggagtacaagtgg
aactacctggaccagtacatctgctctgctggctctgaggacttcagtttgatagactct
ctgaagttctggcggacccgcttcctgctgctgccggccggaggtgctagacgtgtggcg
gacggggaggggcactgggacgtttacggggagggagtgggcacagtggcgggcagagag
ggcatgacgggcaccggggactgggccctgctggatggcttcatccgcttcctggaggga
ctcaaccgcatccgcagacgccaccgctctgataggatcatcaggaaaggaccagcaatg
aagggtttgcaggtgactggtcctctctccgcctaccctccggagcctgtagcaccccct
ctgggcaagaaaggcacctccgctttatcagctctcctggagttggagcagaaccaaaag
actctagaggagcagcaacaacaggggaaaccctcagctgccaccagtgagtcttccact
gtcaccatgaccactacatatgtggacagccctcgcaaggatgctgccttcattttggat
tttatacgtagccctcgttcctcctacatctatcacacacaggtttctacagatcctgct
gaaggaggggccacagacaaaggtggtcaggtagtggctggggtggtggcgaccggtggg
gctgcagcccaggcaacaggggatacaggacccagcttagccacagaaaccagtggacag
tctggtactggagccttatgtttgtcctcatcctccaccctgatggaaatactagaggcc
atcaaacaccccacaacaggtgtgcagcttctacctgagcagaagggcctgccccctaac
tgcttcatcagtgctgagatcgtccattggctggtcaacaacgtagagggtgtggccaca
caaggcatggctgtcgacatcatgcaaaagatgctggatgagggcctggttacccatgca
tcgggggatgccatgaggacctttgtctatggcttctacttctacaggatagtggcagag
aaagacggcgagcgaggccctacatcccagctgccccctcctgtggtacagggctggtca
acggcagccctggaggactttgccctgtttcagaggaagtggtttgaggtggctttcgtc
ctggaggagcgtcgaccttgtgacctcccggccttccttctgccctggctgcccagccgg
cccgcctcctatgcaagtaggcacagctccttcagccgcagctttggaggacgcagccag
gccgcagcactgctagctgccactgtaccagagcagaagacagtcaccttggatgtggac
gttaacaatcgtagcgaccgcaccgagtggtgcagctgctattaccatggcaacttctcc
ctcaacgctgccttcgaggtcaagctgcactggatggccgtcactgcagctgttctcttt
gagatggtccaaggctggcacagaaaggctgcctcctgtgggttcctgttggtgcccgtc
ctggaggtgccctttgccctaccctcctacctatatggtgacccgctgcgggcccagctc
ttcatccctctccacgtccaccgtctgctgagggacagcagcgacaacctgtttgagggg
tttgaaccagagacgtattgggatagaatgcagctctttcaggaggccatactataccga
ttcggttttgtccaagacaagttttctgcctctgctttcaacttcccgtcagagaacaaa
ccccaatacatccatgtaacaggcacagtgttcctccagctgccctactccaagaggaag
tactctagcgggcagcagcggaggaggaggaattcaacagcatcagccagtcagggcctg
tttggctcggaagagctggtgggttactactgggcctacaataccatgctgaccaaggct
tggaggacgggtgtgcttggggatgagaagctggctgaccgcctgctcagagacttcact
gacttctgcgccaacaaagacaagaggctggtgaacttttgggacagctgccaggagaaa
atgaacgctagtgctccatga
DBGET
integrated database retrieval system
