Salvelinus fontinalis (brook trout): 129818637
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Entry
129818637 CDS
T11136
Name
(RefSeq) serine/arginine-rich splicing factor 9-like
KO
K21123
serine/arginine-rich splicing factor 9
Organism
sfon Salvelinus fontinalis (brook trout)
Pathway
sfon03040
Spliceosome
sfon05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
129818637
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
129818637
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sfon03041
]
129818637
Spliceosome [BR:
sfon03041
]
Common components
Common spliceosomal components
SR proteins
129818637
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_3
RRM_7
DUF2457
RRM_occluded
Nup35_RRM_2
Motif
Other DBs
NCBI-GeneID:
129818637
NCBI-ProteinID:
XP_055730702
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All DBs
Position
21:30643162..30646659
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AA seq
252 aa
AA seq
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MTDGRIYVGNLPMDVQERDIEDLFFKYGKIRDVELKNNRGTIPFAFVRFEDPRDAEDAVY
GRNGYGFGDSKLRVEYPRSSGAKFSGPMGGGERGEGGGPKGRFGPPTRRSEFRVIVTGLP
PSGSWQDLKDHMREAGDVCFADVQRDGEGVVEFVRREDMEYALRRLDRTEFRSHQGEMAN
IRVHGEHGASYGRSQSRSRSPRGRGYSPPPYKSRGSPPQRYQSPPRRHVSRHSPPARRHP
VTHHSPPPRHYR
NT seq
759 nt
NT seq
+upstream
nt +downstream
nt
atgactgatggaaggatctacgtgggaaatcttccaatggatgtccaggagagggacata
gaggatctcttcttcaaatatggaaaaattcgggatgtcgaactaaagaataacagggga
accatcccttttgcttttgttcgcttcgaagatccacgggatgcagaagatgctgtctat
ggaaggaatggatatggattcggagactccaagctgcgtgtagaataccctcgctcctct
ggcgccaaatttagtggccctatgggaggcggagaaagaggagaaggagggggtcctaag
gggaggtttgggcctccaactcggagatctgagttccgggtgatagtgactggcttgccc
ccatcagggagctggcaggatcttaaagaccacatgcgtgaggcaggggatgtgtgtttc
gccgatgtgcagcgggatggtgaaggggtggtggagtttgtccgtcgggaggacatggag
tatgccctgcgcagactggacaggactgagttccgttcccatcagggggagatggcaaac
attcgtgtccacggagaacatggtgccagttatggtcgctcgcagtcccgctccagatcc
ccccgggggcgtggctactcaccacctccttacaaaagcagagggtcccctccacagcgc
taccagtcacctccacggcgccatgtgtcccgccatagccccccagcgaggcgacaccca
gtaacacaccacagcccacccccacgccactaccggtag
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