Salvelinus fontinalis (brook trout): 129818663
Help
Entry
129818663 CDS
T11136
Name
(RefSeq) nuclear pore complex protein Nup155-like isoform X1
KO
K14312
nuclear pore complex protein Nup155
Organism
sfon Salvelinus fontinalis (brook trout)
Pathway
sfon03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
129818663
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sfon03019
]
129818663
Messenger RNA biogenesis [BR:
sfon03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
129818663
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nucleoporin_C
Nucleoporin_N
HTH_Tnp_1_2
Motif
Other DBs
NCBI-GeneID:
129818663
NCBI-ProteinID:
XP_055730755
LinkDB
All DBs
Position
21:complement(31803083..31821520)
Genome browser
AA seq
1408 aa
AA seq
DB search
MLFSSSHANLISPTVSNMPSTLGPSSPAAALAEALESSGRLIDRHLQDDRCFPDLSELLN
VPSHNMPSLSGGSDMDYPLQGPGLISVPNLPELSAVRRVPLPPELVEQFSHMQCNCMMGV
FPEICRAWLTIDNDIFMWNYEDGGDVAYFDGLSETILSVGLVKPKAGIFQPHIHFLLVLA
TPVDVVILGLSFPKAQAGLNDSMSGGMQLLPDPLYSIPTDNTYLLAITSTDLGRIFLAGK
DGCLYEVAYQAEAGWFSQRCKKINHSKSSLSFLVPSLLQFSFSEDDPVVQIAIDNSRNIL
FTRSEKGVLQVYDLGVDGQGMSRVAAMSQSSIVAAAGNVARTIDRSVFKPIIQISVIDRS
ESSDCHLLAVTHAGVRLYFSTAPFAPPHVKQPGARPCLLALVHVRLPPGFSASSTLQKPA
KVHKALHSKGVLLMAASETEDSDILWCINHDSFPFKKPLMEAQMMSNVDGHSWALCAIKE
EKAPKISTPLNKDQVPLTDSPVVVQQHNVPPQKFVLLSAKGSHIFHKLRPVDQLRHLLVS
GTGGESEEVERFFKLHREEQACATALIVACSSAACDREVSQWATRAFFRYGGEAQMRFPS
AHSAPSNVGALFGSPVPGSPMPVGSSPMPNPSFLATPVPGMMPQSVSTPYIPATPMPSAP
ITGMSSGPEVVFSGKHNGISVYFARIMGNIWDGSLAVEKTISKGNQAVSILESTASSSDL
ESVLLELRGLKDFLDKNSQFSPSSLGAASFSSPANLQQRLLGFMRPDGGASSQQVQQELQ
RKYHTEAQAYEKMSLQGIQQLVHRSCQTLALWKLLCDHQFSIIISELPMEFQDQIKGVSF
KDVVIRGRELTGALITALINVYIKDSASVDAISTHLRDICPLLYSSDDSVCSKANELLQG
SRQIQTKIDKERTLRESLQLYQLISQHTDLPLVCSQYRQVRFYEGVLELCLTAADKKDPQ
RLGPHFYKNGEPEEDQAGALAFQERLSCYKCITDTMQELVNQSKAAPQSPSVPKQPGPPV
MTSDPNMLSNEDATAHFEQVIGLAQRSQDELFHIALYNWLIQADLTDKLLEVNSPYLEEH
LMHMIKQDQSKVRNMDLLWRYYEKSRSFGKAAHVLARLADMHSTEISLKQRLEYISRAIL
SAKSSSCISAQGAEGEFLHELEEKMEVVRIQVQIQETLSRRYSQHPSVQGAMSQLDSELM
DITKLYGEFADHFRLSECKLAIIHCAGHSDPILVHSLWQEIMEKELGDSVAMSPADRMRA
LSLKLVSLGKIYAGTPRYFPLEFLVKFLEQEVCHLNWDVGFVTFTMQEIGVQLPRLLEVY
DQLFKTRDPCWQRLKKPLHLVECIHVLLSGYVEDPSRVPTYDRRRFTNVCLDNICGYLVE
LQSLSPNSTLRLTIGNFKALQAKLEKVH
NT seq
4227 nt
NT seq
+upstream
nt +downstream
nt
atgttattttcatcttctcatgcgaatctcatcagtcccacagtgtcaaacatgccgtcc
accttgggacccagcagtcctgctgctgcccttgcggaagcgctggagagctccggccgg
ctcatagacagacaccttcaggatgaccgctgcttccctgatctctcagagcttcttaat
gtcccctcacacaacatgccatctttgtctggggggtcggacatggactaccctcttcag
ggacctgggctgatcagtgtgccaaacctccctgaactcagtgcagtccgaagggttccc
ctaccccctgagctggtggagcaattcagccatatgcagtgcaattgtatgatgggagtt
tttcctgaaatctgtcgagcatggctcaccattgacaacgatatcttcatgtggaattat
gaggatgggggggacgttgcatattttgacgggctcagtgaaaccatcctgtccgtgggg
ctggtcaaacctaaagcagggattttccagccacacatccacttcctgttggtcctagcc
actcctgtggatgtagtgatcctggggctcagctttcctaaagctcaggcagggttgaat
gacagcatgtctggagggatgcagttactaccagacccgctgtactccatccccacagac
aacacctacctcctggccatcacttccaccgacctgggccgcatcttcctggcagggaaa
gatggctgcctgtatgaggtagcctaccaggccgaggcaggctggttcagccaacgctgt
aagaagattaaccactccaaaagcagcctgtccttcctagtcccctctctgctccagttc
tccttctctgaggacgacccggtagtgcagattgccattgacaactcccgtaacatactc
ttcacccgctcagagaagggggttctacaggtgtatgatctgggtgtggatgggcagggt
atgagccgtgtggcggccatgtcacagagttccatcgtggctgcagcaggaaacgttgcc
aggaccatagatcgctctgtgtttaaacccatcatacagatctctgtgatagacagatcg
gagtcgtccgactgccacctgctggctgtcactcatgcaggagtgcgtctctacttcagc
actgctccctttgccccaccacatgtcaagcagccaggggcacgcccttgtctgcttgct
ctggtccatgtccgcctgcctccaggcttctctgcctcctccaccctgcagaagcctgcc
aaggtccacaaggctctgcacagcaaaggagttctcctgatggcagcgtctgagactgag
gacagtgacatcctgtggtgcatcaaccatgactccttcccctttaagaaacccctgatg
gaggctcagatgatgtccaatgtagatggccactcctgggcactttgtgccatcaaggag
gagaaggcacctaaaatctctacccccctgaataaggatcaggttcccctcactgactct
cctgtcgtggtgcagcaacacaatgtccctccgcagaaatttgtccttctctctgccaag
ggaagtcacatcttccacaagttgcggccggtggaccagctgcgccacctactggtgagc
ggtactggtggcgagagtgaagaagtcgaacgcttcttcaaactgcacagggaggagcag
gcgtgtgccactgctctgatagtagcctgttccagtgctgcctgcgacagagaggtgtct
cagtgggccaccagagccttctttaggtatggaggagaggctcagatgaggttcccctcg
gctcattctgctcctagcaacgtcggagcgctgttcggctctcctgtaccagggtcccct
atgccggttggtagcagtccaatgcctaaccctagtttcttagcaacgcctgttccaggt
atgatgccccagagtgtgtctacgccctatatacccgccacgcccatgccctccgccccc
atcactggcatgtcttctgggccagaggtggtcttctcagggaaacacaatggcatcagt
gtctacttcgcacgcataatgggtaatatctgggacgggagtcttgctgttgagaagacc
atcagtaaaggaaatcaggctgtcagtattttggagagcacagccagctcatctgatctg
gagtcagttcttctggagctccgtggtctgaaggacttcctggataagaactcccagttc
agcccctcgtctctgggggcagccagtttcagctctccagccaatctgcagcagcgtctg
ctgggcttcatgcggcctgatggaggagccagttctcagcaggtccagcaggaactccag
aggaagtaccacaccgaggctcaggcctatgagaagatgtccctgcagggtatccagcag
ctggtgcatcgctcctgtcagaccctggccctgtggaagctgctgtgtgaccaccagttc
agcatcatcatctctgaactacccatggagttccaggaccagataaagggggtgagtttt
aaggacgtggtgatccggggtcgagagctgaccggagctctgatcacagccctcatcaac
gtctacatcaaagactccgcctctgtagatgccatcagcacccaccttagagacatctgt
cctttgctgtacagcagcgacgacagcgtctgctcaaaggctaatgagttgctgcagggc
tccagacagatccagactaagatcgataaggagagaacactgagagagtcactacaactc
taccagctgatcagccaacacacagacctgccactggtctgctcccagtacagacaggtg
cgtttttatgagggggtgcttgagctgtgcctgactgcagcagataagaaggatcctcag
aggctgggacctcacttctataagaacggagaaccagaggaggaccaggctggagcactg
gccttccaggagaggttgtcatgctataagtgcatcacagacaccatgcaggagctggtg
aaccagagtaaagctgctcctcagtctcccagtgtccctaagcagccaggaccccctgtt
atgacctctgaccccaacatgctgagtaatgaggatgccaccgcccactttgagcaggtc
attggtctggcccagaggtcacaggatgaactcttccacatagccctctacaactggctg
atacaggctgacctcaccgacaagcttctggaggtgaactctccatacctggaggaacac
ctgatgcacatgatcaagcaggaccagagtaaggtgcggaacatggacctgctgtggcgg
tactatgagaagagccgtagctttggcaaggcagctcacgtcctggccaggctcgcggac
atgcacagtactgagatctccctgaagcagaggctggagtacatttccagggccatcctg
tcagccaagagctcctcttgcatctctgctcaaggagccgaaggggagttcctgcatgag
ctggaggagaagatggaggtggtgcgtattcaggtccagatccaggagactctgagcaga
cgttactcccagcatccctctgtacagggagccatgtcacaactggattccgagcttatg
gacatcaccaagctgtatggggagtttgcagatcacttccggttgtctgaatgcaaattg
gccatcatccactgtgctggtcactctgaccccatcctggtgcactctctgtggcaggag
atcatggaaaaagagctgggtgacagtgtggccatgagtccagctgacaggatgagagct
ctgagtctcaaactggtgtctctggggaaaatctacgcaggaacacccagatactttcct
ctagaattcctggtgaagtttttggagcaggaggtgtgtcatctgaattgggacgtgggc
tttgtcaccttcaccatgcaggagataggagtacagctcccccgtctgctggaggtctac
gaccaacttttcaagacacgggatccgtgttggcagcgtctgaagaaacctctccacctg
gtagagtgtatacatgtgctgctgtcaggatacgtagaggaccccagcagagtaccaaca
tatgaccgacggcggttcactaatgtgtgtctggataacatctgtggttacctggtggag
ctgcagtccctgagtcctaactctaccctgcggctcaccatcggcaacttcaaggccctg
caggccaagctggagaaagttcactga
DBGET
integrated database retrieval system
