Salvelinus fontinalis (brook trout): 129818680
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Entry
129818680 CDS
T11136
Symbol
nkx6.1
Name
(RefSeq) homeobox protein Nkx-6.1 isoform X1
KO
K08030
homeobox protein Nkx-6.1
Organism
sfon Salvelinus fontinalis (brook trout)
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sfon03000
]
129818680 (nkx6.1)
Transcription factors [BR:
sfon03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ANTP: NKL
129818680 (nkx6.1)
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Gene cluster
GFIT
Motif
Pfam:
Homeodomain
Homeobox_KN
PKK
ABC_trans_N
Motif
Other DBs
NCBI-GeneID:
129818680
NCBI-ProteinID:
XP_055730799
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Position
21:32275807..32279370
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AA seq
331 aa
AA seq
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MLAVGQMDGSRQSAFLLSTPPLAALHSMAEMKTPLYPAYPLSSTGPASSTSPTATSPNPG
GIPVSSPGIKPSSGMSSLGSPHQCSALGTPHGINDILSRPSILSPGAAAAVAASSSAGIL
SGMPRFSSLSPPPPHGLYFSPSAAAVAVARYPKPLTDLPGRTPIFWPGVMQSPHWRDARF
ACSPHALCFTFSDQNSVLLDKDGKRKHTRPTFSGQQIFALEKTFEQTKYLAGPERARLAY
SLGMTESQVKVWFQNRRTKWRKRHAAEMASAKKKQDSETERLKGASENEDDDDDYNKPLD
PNSDDEKITQLLKKHKPNSSLLIHTSENDSS
NT seq
996 nt
NT seq
+upstream
nt +downstream
nt
atgttagccgtggggcagatggacgggtccagacagagcgctttcctcttaagcacccca
cctttagcagctctgcatagcatggcggagatgaagaccccactctacccagcctacccg
ttatcttccaccgggccggcctcttctacctcacctactgccacctctccaaaccccggt
ggcatcccggtgtcctcaccggggatcaaaccatcctccggaatgtcatctctcggatcc
ccccatcaatgcagcgcgctaggaacacctcatggaataaacgacatcctcagtcgtccc
tcgatcctttccccaggagctgctgctgccgttgctgcgtcctcttctgccggaatcttg
tccggaatgccccgcttcagtagcttgagccccccgccaccccatgggctctacttcagc
cccagcgctgcagcagtggcagtggctcgctaccccaagccgttgacagaccttccaggc
aggaccccgatattctggccaggagtcatgcaaagcccacactggagagacgccaggttc
gcatgttcaccccatgctttatgttttacattttcagatcagaattctgtactgctcgac
aaagatggaaaaagaaaacatacacgtcccaccttctctggacaacaaatatttgccctg
gaaaagacttttgaacaaacgaaatacctcgctgggccagagagagcacgactggcctat
tcgttgggaatgacagagagtcaagtgaaggtgtggtttcaaaaccgaagaactaaatgg
agaaaacggcacgcggctgagatggcttcggcaaagaagaagcaggattctgagaccgag
aggctgaaaggggcttcggagaacgaagatgatgatgatgattataacaagccgttggac
cctaactcagacgacgagaaaataacacaactactgaaaaaacacaaaccaaactcctca
ctccttattcatacgtcagaaaacgacagttcgtag
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