Salvelinus fontinalis (brook trout): 129818707
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Entry
129818707 CDS
T11136
Symbol
pum3
Name
(RefSeq) pumilio homolog 3 isoform X1
KO
K14844
pumilio homology domain family member 6
Organism
sfon Salvelinus fontinalis (brook trout)
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sfon03019
]
129818707 (pum3)
03009 Ribosome biogenesis [BR:
sfon03009
]
129818707 (pum3)
Messenger RNA biogenesis [BR:
sfon03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
129818707 (pum3)
Ribosome biogenesis [BR:
sfon03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
129818707 (pum3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CPL
PUF
Bmt2
PUF_NOP9
RXT2_N
Motif
Other DBs
NCBI-GeneID:
129818707
NCBI-ProteinID:
XP_055730840
LinkDB
All DBs
Position
21:33263216..33278092
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AA seq
648 aa
AA seq
DB search
MSSELLRMEPKKKIFSPKGGKKLIRKEGTGKTGTKPTGKSPGKRPFKPRSGEKGKTFEKT
GGKGAPQKFLNKKPTDGKYIKPTDGKLIKKRKFIPGKAKEEEGSEAKKPKWDEFKQQKKE
LKQNRQQTEKKESYQIVSRAKQVWEMVRRKDCGKEKRIKLMKELQELVKGKIKTIAFAHD
STRVLQCFIQFGNDKQRQEVFDELKDDMVELSKSKYARNIVKKFLMYGSKEQVAGVMVGF
KGKVRQMLRHSEASSVVEYAYNDKAILSQRLMLTEELYGTTFQVFKSAVCPTLEKVLEAN
PDKVNGILEEMKQILTPMATKEAVIKHSLVHKVFLEFFLHAPAKQRTEMIESIRESVVYM
AHTHDGARVAMHCLWHGTPKDRKVIIKTMKTYMDKFAMGEFAFLVLIAAFDCIDDTKLVK
QAVLSEILASLPDVITNKNGKKVVVYLLSPRDPTHLLPEIIQVLEKGDGNAHSKKDVALR
RKELLEAVSPHLIQHLCDHARTMAMDKASSITVRDILGSASGDLHPAMEAVAELAADDFT
PGGVDGQLHMAEHPAGHLVLKWLIEQDTKMKEVGREERFSRVLLDKVGMDKLKTWAAVNR
GAIVLCCLLNSADETVAEEVREALKAYAPELQKIQNCKGVEFLLEKLA
NT seq
1947 nt
NT seq
+upstream
nt +downstream
nt
atgtcaagtgaattattgagaatggaacccaaaaagaaaatattttcccctaaaggtggc
aagaagttaatacgtaaagaaggtacaggtaaaacggggaccaaaccaaccggtaaatca
ccagggaaaaggccatttaaaccccgcagtggagaaaagggcaagacgtttgagaagact
ggaggaaagggggctccacagaaattcttgaacaaaaaacccacagatggaaagtacatc
aaacccacagatggaaagttaatcaaaaagcgaaaattcatacctgggaaggccaaggaa
gaggaaggttccgaggccaagaagcccaaatgggatgagttcaaacagcagaagaaagag
ctgaaacagaaccggcagcagactgaaaaaaaggagagttatcaaatagtgagcagagcc
aagcaagtgtgggagatggtcagaaggaaagattgcggcaaagagaagaggatcaaactc
atgaaagagcttcaggaacttgtgaaaggaaagataaaaacaatagcatttgctcacgac
tccaccagagtcctccagtgtttcatccagtttgggaacgacaagcaaagacaggaggtt
tttgatgaactcaaagatgatatggtcgagctgagtaaatcaaagtatgcacgaaatatt
gtgaagaagtttttaatgtatgggagcaaggagcaggttgcgggtgtgatggtgggcttc
aaggggaaagtgaggcagatgctgcgtcactctgaggcgtcgtcggtggtggagtacgct
tacaatgacaaggccatcctctcccagagactcatgctcacagaggagctctacggaacc
acattccaggtcttcaagtcggcagtgtgtcccacgctagagaaggtgctggaggcgaac
ccggacaaggttaatggcattttggaggagatgaagcagatccttacccccatggccaca
aaagaggctgtgatcaaacattctctggtgcacaaagtgtttctggaattcttcctgcat
gccccagccaaacagaggactgaaatgattgagtcaataagggagtctgtggtgtatatg
gcccacacccacgatggagctagagtagcaatgcactgcctgtggcatgggacacctaag
gacagaaaagtcatcattaaaaccatgaagacctacatggataagtttgcaatgggagag
tttgcgttcctagtcctcatcgctgcctttgactgcatagatgacaccaagctagtgaag
caggccgtcctatcagagattcttgcttccctgcccgatgtcatcactaataagaatgga
aagaaagttgtggtgtacctactcagcccgcgagaccccacccacctgttacctgaaatc
atccaggtgctggagaagggggacggaaacgcccacagcaagaaggatgttgcccttcgc
cggaaggagctcctggaggcggtgtctccgcacctgattcagcacctgtgtgaccacgcc
cgcaccatggcaatggacaaggcctccagcatcaccgtcagggacattctggggtccgcc
agtggggacctgcatcctgccatggaggctgtggctgagctggctgctgacgacttcaca
ccaggaggagtggatgggcagctgcacatggctgaacaccctgctgggcatctggtgctc
aaatggctgattgaacaagacaccaagatgaaggaggttgggagagaagagcgtttctcc
agggtcctgttggacaaggtggggatggacaaactaaagacgtgggctgcagtgaaccgt
ggggctatcgtgctctgctgtcttctgaacagtgcagacgagactgttgcagaggaggtt
cgggaggcgttgaaggcctacgctccagaactacagaagatccagaactgtaaaggagtg
gaatttcttttggagaaattggcctga
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