Salvelinus fontinalis (brook trout): 129818774
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Entry
129818774 CDS
T11136
Name
(RefSeq) LIM/homeobox protein Lhx5
KO
K18493
LIM homeobox protein 5
Organism
sfon Salvelinus fontinalis (brook trout)
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sfon03000
]
129818774
Transcription factors [BR:
sfon03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain LIM
129818774
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LIM
Homeodomain
Homeobox_KN
Dna2_Rift
Motif
Other DBs
NCBI-GeneID:
129818774
NCBI-ProteinID:
XP_055730982
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All DBs
Position
21:complement(34862465..34883034)
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AA seq
395 aa
AA seq
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MMVHCAGCDRPILDRFLLNVLDRAWHAKCVQCCECHCNLTEKCFSRDGKLYCKIDFFRRF
GTKCAGCLQGISPSDLVRKARSKVFHLNCFTCMVCNKQLSTGEELYVIDENKFVCKEDYL
SSGAIKEVNLNSVSSCTDRSLSPDLQDPIQDDTKETDNSMSSDKDMNNNENEEQNSGTKR
RGPRTTIKAKQLETLKAAFVATPKPTRHIREQLAQETGLNMRVIQVWFQNRRSKERRMKQ
LSALGARRHAFFRGPRRMRPLGGRLEDPDILGPGAYGYYTEYQGDYYGGGGNYDFFPHGP
PSSQAQSPAESPYIHGGAMEGSVSAHHPSDDQRFTDMISHADTPSPEPGLPSSLQPVPGE
VYGGGPSPPFSLASNSSYSAPMSHPGQEMGETTVW
NT seq
1188 nt
NT seq
+upstream
nt +downstream
nt
atgatggtccactgcgcggggtgcgacaggcccatcctggaccggttcctgctcaacgtg
ttggaccgagcctggcacgccaagtgcgtccaatgctgcgagtgccactgtaacttaacc
gagaagtgcttctcgcgtgatgggaagctttattgtaaaattgactttttcaggaggttt
gggacgaagtgcgcgggctgcctccaaggcatctctcccagcgatcttgtgcgcaaggcg
cgcagcaaggtgttccatctcaactgcttcacgtgcatggtgtgcaacaagcagctgtcc
acgggcgaggagctctatgtcatcgacgaaaataagtttgtgtgcaaagaagactaccta
agctcaggggctatcaaggaagtcaatttgaattcagtgtcatcatgcacagacagaagt
ttatcgccggacctccaggacccgatacaggacgacacaaaagagacggacaattccatg
tcctcagataaggacatgaacaataacgagaatgaggagcagaattcgggcacgaagcgg
cgaggcccgcggaccaccatcaaagccaagcagctggagacgctgaaggctgccttcgtg
gccacgccgaaacccacacgacacattcgggaacagttggcccaggagacgggactcaac
atgcgggttatacaggtatggttccagaaccgtcggtctaaggagaggaggatgaagcag
ctgagtgctttgggggcccggcggcacgccttcttcagagggccccggaggatgaggccc
ctgggaggacgactggaggacccagacatactggggcctggggcctatggatactacaca
gagtaccagggcgactactacggaggagggggaaactatgacttcttcccccacggccct
ccctcctctcaggctcagtctccagcagaatccccctatatccatggaggtgccatggag
ggctctgtgtcagcccaccacccctctgatgaccagaggttcacagacatgatctcccat
gcagatacccccagccccgagcccggcctgcccagctccctgcagcccgtccctggggag
gtgtatggaggagggcccagcccacccttctccctggctagtaactctagctacagcgcc
cccatgtcccaccccggacaggagatgggagagaccaccgtctggtag
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