Salvelinus fontinalis (brook trout): 129818839
Help
Entry
129818839 CDS
T11136
Symbol
strbp
Name
(RefSeq) spermatid perinuclear RNA-binding protein isoform X1
KO
K13200
spermatid perinuclear RNA-binding protein
Organism
sfon Salvelinus fontinalis (brook trout)
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sfon03041
]
129818839 (strbp)
Spliceosome [BR:
sfon03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
129818839 (strbp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DZF_C
DZF_N
dsrm
Dicer_dsRBD
Motif
Other DBs
NCBI-GeneID:
129818839
NCBI-ProteinID:
XP_055731081
LinkDB
All DBs
Position
21:complement(37894749..38022406)
Genome browser
AA seq
722 aa
AA seq
DB search
MRSFRSFGNDDRHVMAKHSTIYPSSSELEAVQTLVSTVEGALKHVSDWIDQSNVQSVQSN
SQADAAAGQTDGQPNPTDSTATEDGSADHDDDLNDDPDVSPSASPDDCTDSSSREPGGGV
LCGVMRIGLVAKGLLIKEDMNLELVLMCREKPTDALLCTVCDNLPLQIQKLTEEKYEVQR
CVPEAAILVCSTTEPKLTLKVTLTSPQMREDSDTDEQVEGVELSDPADMLDRHRCLVALA
ALRHAKWFQARVNGLKSCVIILRILRDMCNRLPAWEPLKGWPLELICEKAIATCNRPLGA
GEALRRVMECLASGILLPGGPGLHDPCEKELTNTLTAMTDEEAEAITYSAQHALRLMAFG
HIYKVLEMDPLPSSKPSQKYPWSDKEGSGLKRPYEDGPTDDKDLIKKMKRNLRKVLDSKA
IDTNQPMNALMRLNQIRPGLQYKLLSQSGPVHAPVFTMSVDLDSTVYEASGSSKKTAKLH
VAVKVLQAMGYPTGFDADLDCSADEKSDGEGKSESSTHSSNNTAHSDNSNTLEVRTQGPI
LTASGKNPVMELNEKRRGLKYELISESGGSHDKRFVMEVEVDGQKFRGAGPNKKVAKASA
ALAALEKLFSGPNAAANSKKKKIIPQHATKGALAAAAAASAVAAQVARGRGRAAALTRGA
FISAAAPGYTQIPGTCFGTPYGYSAAAAPAYGGLFIDNPFYQPRTIAPFIIHLGPQDLFS
DF
NT seq
2169 nt
NT seq
+upstream
nt +downstream
nt
atgaggtccttccgttcgttcggtaatgatgaccgtcacgtcatggccaaacactccacc
atctacccatcgtcgtctgaactggaggcggtccagaccctggtgtccaccgtggagggt
gccctcaagcacgtctctgattggatagaccagagcaatgtccaatcggtgcagagtaac
agccaggcagacgcagcagccggccagaccgacggccagccgaaccccacagacagcacg
gcgacagaggacggtagtgctgaccatgacgacgaccttaacgacgaccccgacgttagt
cccagcgccagcccagatgactgcacagacagcagcagcagggagcctggtggaggtgtg
ctgtgtggggtgatgaggatcggcctggtggctaaagggctgctcatcaaagaggacatg
aacctggagctggtgctgatgtgtcgagagaaacccacagatgcactgctgtgcactgtc
tgtgataacctgcccctgcagatacaaaagttaaccgaagagaagtacgaggtgcagcgc
tgtgtgccagaggcagccatcttggtgtgtagtacgacagagccaaaactcaccctgaag
gtcaccctcacctccccgcagatgagagaggacagcgacacggacgaacaagtggagggt
gttgagctgtcagaccctgcagacatgctggacaggcacagatgcctggttgccctggcg
gctctgcgacatgccaaatggttccaggccagagtaaacgggttgaagtcgtgtgtcatc
atcctcagaatcctgagagacatgtgcaatagactaccagcctgggagccgctgaaagga
tggcccctggagctgatctgtgagaaggccatagccacgtgtaaccggccgctgggtgca
ggggaggccctccgtagggtcatggagtgtctcgcctcaggaatcctccttccaggagga
ccagggttacacgacccatgtgagaaggagctgaccaacaccctgacggccatgacagac
gaggaggcagaggccatcacatacagcgcgcagcacgctctgagactgatggcgttcggt
cacatctacaaggtgctggagatggaccctctcccctctagtaaaccctcccagaagtac
ccctggtcagacaaggagggctcggggctgaagaggccctacgaggacgggcccacggac
gacaaagacctcatcaagaagatgaagaggaacctgaggaaagtgctcgacagtaaagcg
atagacaccaaccaaccaatgaatgctctgatgcgtctgaatcagatacgtccaggtctg
cagtacaagctgctgtcccagtccggcccggtccacgctcctgtcttcaccatgtctgtc
gacctagacagcaccgtctacgaagcctcaggctcctccaagaagaccgctaagctgcat
gtcgctgtcaaggttctgcaggcgatgggttaccccacaggcttcgacgcggacctggac
tgcagtgcagacgagaagtcggacggagagggaaagagcgagtcgtctacacactcgagc
aataacacagcacactcagacaactcaaatacactggaggtccgaactcagggtcctatt
ctgacggccagcggtaagaaccccgtcatggagctgaacgagaagcgcaggggtctgaag
tacgagctcatatcggagagcgggggcagccacgacaaacgcttcgtcatggaggtggag
gtggatggtcagaagtttcgcggggcagggcctaataagaaggtggcgaaggcttcggct
gcgttggccgctctcgagaaactcttctctggccccaacgccgccgccaacagcaagaag
aagaagatcatcccacaacatgccactaaaggagcactagctgcagcagcggcagcctcg
gcagtagcagcccaggtggccagagggagaggtagagcggcagccctgaccagaggagcc
ttcatcagcgctgccgcaccaggatacacacagataccaggtacatgcttcgggactcca
tatggatacagtgctgcagccgccccagcctacggtggtcttttcattgacaatcctttt
taccagcctcggaccatcgcaccatttattattcatttgggtcctcaagatctcttctct
gacttctag
DBGET
integrated database retrieval system
