Salvelinus fontinalis (brook trout): 129819077
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Entry
129819077 CDS
T11136
Symbol
sec16a
Name
(RefSeq) protein transport protein Sec16A isoform X1
KO
K20353
COPII coat assembly protein SEC16
Organism
sfon Salvelinus fontinalis (brook trout)
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sfon04131
]
129819077 (sec16a)
Membrane trafficking [BR:
sfon04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
129819077 (sec16a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_Sec16
Sec16
Motif
Other DBs
NCBI-GeneID:
129819077
NCBI-ProteinID:
XP_055731591
LinkDB
All DBs
Position
21:50167542..50248094
Genome browser
AA seq
2531 aa
AA seq
DB search
MQPPPRTGPPGASGPPPASLGPNAFRRTRPHKHTGAAAIAGLPAQPMTDPFAFGRQAPPP
MATGGHPPPPNSSPLPMQAPPPSMYHQAGMGQGLHQPQPLDSAQAGAVPLGPPPPSTPGV
SILTPHGTASPVLFPGQLPGPPGHAPPSAEQGYFNSREPAPSMTPGHLPMASAPMSGQAP
YGQDHGGDHHPQAMLFKPVPPVLSQWVPDHGSRPPSVQNYFQPTSDPLPQVCNAAPQSQI
SPHTPLPHSTPPTHPQQQHQPQPPPQHPDRPTSSQWPDLAGANTPQQHNAHFQAQTYFSQ
SSATLDSWFNQHPQDLVYHQMGAGPGLARPDSARSHYRHDSAGSHHGSHYGTYHASTPGP
APVPFIPDGTISMFFKGNDVENEETLAGEGAGAVNGLQDFQPSHNHQQMSSPQPQPNPVA
GAEATHSYRGPPPQAGQSLTYMNDGNFPGAGKPIQQKPAEAQFDHVENLECVPNQEVLPS
EHQNSPAAAAAHGGDCYEAGPNLETPDSVPRPIRSASVSSSYSNLSHGSGTGTVPRRHQG
VVGTFIQQESPRPSEDAFSSAAAGGYFEQIDTSPAGNMAAAYQSIPERMCHSQPPTPSPP
KPTGIFQASANSSFEPVRSHSVAVRPAEVDRARMVAERGSDSLPGNLEQPPDNLENVYGA
ATGHTQAGDGAGAPPLAYPLSHSHSRPSSRAHVAHRPCESPATTLWAQHDPASLGTNILL
VPAAPPVLAPLREPSAEVIQPPEDGSLDLQPPQCAPLPSQHPSENLENPPKVSEGDTSDS
QPNLGYASLLVSESLHQPVLIAPPTSNYSVIPPSNPAFAANQISPREATVPVRPPSQAQG
ASAAQPGPPLRSNQNPLFTPTPMSFSAASSQSPLNLVRDDREGVKPEITPPPSLSQPARS
PLSKVQSMCGNNHSSLPVNLQAPLPAAPGAANYNQLSNYELLDFSMHQSQIPNQAAGLPP
LSLQQGLPLAGNAPGFYLQVTKDAQQVGRGNEDASTTQIPAEPMSLPVAPNTQQPPSDPP
IVPQPGHQGQGDDPAAPLSGAPPPQGQYPPPVQGPATGNAPTPSAAYPGPRGHVPLANPP
PPGTGVPPAQPAQPAPTDPQRPPSSLGSQLGYGPPPPGQVYGGYYGGSYPEYPDGRGSYL
PAQYPPAPVDPRAQQYYQPGHQGQGDDPAAPLSGAPPPQGQYPPPVQGPATGNAPTPSAA
YPGPRGHVPLANPPPPGTGVPPAQPAQPAPTDPQRPPSSLGSQLGYGPPPPGQVYGGYYG
GSYPEYPDGRGSYLPAQYPPAPVDPRAQQYYQDDPYMIADPRYGRYEGANPAYPPYREPP
PERPSSRTSQYSDRPSSRQGFPPEDYQRANRSAYDDYYAEYYKNQYGDRSRWEGYNASAG
TYDPRYRDYYDQNYWYNYNPEAYRGREAAYYNQQPTQQYPAATARPPGYDDKWRYYPGYD
ASFDDDYRRQRDQYRDDFDRRSVHSEQSAHSLHSSQSHRSRRSSFSSRSQQSEVYRSQPD
LTAVYDPAVSTLPVDYSYGQYPEQTDPGQSFSQYPYTSGYQADDSTWVVAEQPPPRPITP
EKYSVSHRCARFGPGGQLIQVLPNLPSAGQPALVEIHNMETMLQDTPDQSELRSFPGPLL
KEETHKVDVIKFSQNKGLECARNNDLLDKDSAALLWDFIVLLCRQNGTVVGTDIADLLLK
EHRSVWLPGKSPNEANLIDFNNEPLARAEEEPGTGPLSLLSDTFMTVPENVGKETERFRE
LLLFGRKKDALEAAMKGALWGHALLLASKMDSRTHARVMTRFANSLPINDPLQTVYQLMS
GRMPASATCCGDEKWGDWRPHLAMVLSNLTHTLDLDTRTITTMGDTLASKGLTDAAHFCY
LMAQVGLGVFTKKSTKMVLIGSNHSLSFFQFASNEAIQRTEAYEYAQSLGSQPCSLPNFQ
VFKLIYACRLAEAGLCAQAFHYCEVISRSVLMQPSYHSPVFTSQLIQMSEKMRFFDPQLK
EKADQELFNEPEWLIDLRQLDGQMRTGVIAYNADRDTPQQYDCSTPNSELDQTSPPEPYA
QPLDMVGHTSDNPLMTSLMPGPPQQGVQLMPPAPPTILQDGMVSQPPHPNEGVQFYPVPP
SLPGPPGQIPLSGFPPQGSGFVQPYQPQQPQPDKNDMFPGAQHQQMAPPQHQQQMMPPPQ
HQQQMMPPPQHQQQMMPPQMQQPQKMPSDDYPLTGPPELQPPPMSTSPQRNTFTPQMDFY
DQMAHMGPGRRSRTTSQSSMQMQPPGRRSRTMSESSTHSGGRERSNSAAKQSSPPPPSIP
EQAKKDSPKKGGGGGGGGWLNWLYRKGKNEAHLPDDKNKSIVWDEKKQKWVNLDEPEEEY
KPPPPPPSGFPKMLGPIPGQGGPGGPPTGGPPVNMFSRRAGTKSRYVDVLNPGGPRAKPG
GSAPAPSDFFAPLAPMPMPANLFVPGAEEQQPMEGNVPETGGNQEQSDPNPSAVPQMFNP
TLLPPSPVGPPIAAGSPPGEVPLTPQPPPQGAPPSGGVTFYNPAQFAQASTPSGRLLSGR
LGGQRAYPVLK
NT seq
7596 nt
NT seq
+upstream
nt +downstream
nt
atgcagccccctcctcggaccggcccccctggtgcatccggcccccctcctgccagcctt
gggcccaatgccttccggaggacaaggccccacaagcatacaggagcagcggccattgcg
ggactacctgcccagcccatgacagaccccttcgcatttggcaggcaagcccctcctcct
atggctacaggtggtcacccgccgccacccaatagcagccctctgcctatgcaagccccg
cctcccagtatgtaccaccaggctggcatgggtcaggggctgcaccagccacaaccactg
gatagtgcacaggctggggctgtgccccttggcccaccaccgccctctaccccaggggta
agcatcttaacccctcacggtactgcgtcccctgtcctttttcctggacagctacctggc
ccgccaggccatgcaccaccaagtgcagagcagggctattttaactctagggagccagca
ccctcgatgaccccaggacaccttcccatggcctcagcccctatgtctggccaagcgcct
tatggccaggaccacggaggagaccatcaccctcaggcgatgctctttaagcctgtgcct
cccgttttgtctcagtgggtgcccgatcatgggagccgccccccgtcggttcagaactat
ttccaacccactagtgatcctctaccccaggtttgtaatgccgctccccagtcccagata
tctccacacacacccttgccccacagcacccctccaacacacccccagcagcaacaccag
cctcaaccacctcctcagcacccagacaggcctactagctcccagtggcctgacctggca
ggtgcgaacacaccccagcaacacaacgcccattttcaggctcagacctacttcagccag
agctcagccaccctggactcctggttcaaccagcacccccaggacctggtctaccaccag
atgggtgctggccctggcctggctcggcccgactcagccagatctcactatcggcacgac
tcggccgggtctcaccatggatcccactatggaacttaccatgcatcaacccctggccca
gcgccggtccccttcatcccagacggcaccatctccatgtttttcaaaggaaacgacgtg
gagaacgaggagaccctcgccggagagggagccggagcagtgaatggtctccaggacttc
cagccctcccataatcaccagcagatgtcatcccctcaaccccaacccaacccggtggca
ggtgcagaggccacacacagttaccgtgggccccccccacaagctggccaatcattaacc
tacatgaacgatggtaactttcctggagctggcaaacccatccagcagaaacctgctgag
gcccagtttgaccatgtggagaacctggagtgtgtgcccaaccaggaggtcctacccagc
gagcaccagaacagccctgctgcagcagccgcccacgggggagattgctacgaggcaggc
cccaatctggagacccccgactctgtcccccggcccatacgttctgccagcgtgtcctcg
agctacagcaacttgagccacggcagcggcactggtacagttccacgccggcaccaagga
gtggtgggcaccttcatccagcaggagagccctcgtccctcagaggacgcattctcctca
gccgctgccggaggctactttgagcagattgacacctctccggccgggaatatggccgct
gcttaccagagcatcccggagagaatgtgccacagccaaccccctacgcccagtcctccc
aaacccaccggcattttccaggctagtgccaactcctcctttgagcctgtgcgctcacac
agtgtcgcagtgcgcccggcggaggtggaccgtgcccggatggtggcggagaggggctct
gactctctgcctgggaacctggagcagcctccagacaaccttgagaatgtctacggagca
gctacagggcacactcaagctggggatggagctggagcacctcctcttgcataccctctg
agtcactcccactccaggccctcgtcccgggctcatgtggcccaccggccctgtgagagc
cctgccaccaccctgtgggcccaacatgaccccgctagcctgggaaccaacatcctgctg
gtccccgctgcccctccggtccttgccccactgcgagagcccagtgccgaggtcatccag
ccccccgaggatggctccctggaccttcagccccctcaatgcgcccctctgccctcccag
cacccctcggagaacctggagaaccctcctaaggtgagtgagggggacacgtctgactcg
cagcccaatctgggctatgcctctctcctggtgtctgaatcgctccaccagcccgtgttg
attgccccacccacctccaattacagtgtgattcctcccagtaaccctgcattcgcagcc
aatcagatcagccccagggaggccacagtacctgtgaggccgccctcgcaggctcaaggg
gccagtgccgcacagcccggtcctcccttgcgctccaatcagaacccattatttacccct
acaccaatgagcttcagcgccgcctctagccagagccccctcaatcttgttcgggatgac
agggaaggggttaaaccagagatcacgcccccaccatccctgtcccagcctgctcggtcc
cctctctcaaaggtccaatcaatgtgcggaaacaaccattcttctctacctgttaatttg
caggctcctcttcctgctgctcctggtgccgccaattataatcagctttcaaattacgag
ctgcttgatttttctatgcaccaatctcagatcccaaaccaagccgcagggctgccacct
ctctccctccagcagggcctgcccctggcgggtaacgctcctgggttttacctgcaggtc
accaaagatgctcagcaggtgggtagaggcaacgaggacgcctccacaacacagatacct
gccgaacccatgtccctcccagtggccccaaacacccaacaaccaccctctgatccaccc
attgtgccccagcctggtcaccaaggccaaggagatgaccctgcagcccctctcagtgga
gcaccaccaccgcaagggcagtacccacccccagtgcagggtcctgccacggggaatgca
cccaccccctctgcggcttaccctggacctcggggacatgtgcctctagccaacccccct
ccaccaggaaccggggttcctccagcccagccagcccagccagcccctacagacccacag
cgacctccctcgtctctgggaagccagctggggtacggcccacctcctccagggcaggtg
tatgggggatactacggaggttcctacccggagtacccagatggcagaggatcatatctt
cctgctcagtacccacccgcacctgtggaccccagagcacagcagtattatcagcctggt
caccaaggccaaggagatgaccctgcagcccctctcagtggagcaccaccaccgcaaggg
cagtacccacccccagtgcagggtcctgccacggggaatgcacccaccccctctgcggct
taccctggacctcggggacatgtgcctctagccaacccccctccaccaggaaccggggtt
cctccagcccagccagcccagccagcccctacagacccacagcgacctccctcgtctctg
ggaagccagctggggtacggcccacctcctccagggcaggtgtatgggggatactacgga
ggttcctacccggagtacccagatggcagaggatcatatcttcctgctcagtacccaccc
gcacctgtggaccccagagcacagcagtattatcaggatgacccatacatgatagcggac
cctcgctacggcagatatgaaggagccaacccggcctaccccccatacagagagcccccg
ccagagagacccagctccagaaccagccagtactcagacagaccctcctccaggcaaggt
ttcccccccgaagactatcagagagctaaccgaagtgcttatgatgactactatgcagag
tattacaaaaaccagtacggggaccggagcaggtgggagggctacaatgcttcagcaggc
acatatgacccccgctacagagactactacgaccagaactactggtacaactacaaccct
gaggcctaccggggcagggaggcagcctactacaaccagcagcccacccagcagtaccct
gccgctaccgccaggccaccgggctatgacgacaagtggcgctactatcctggttacgat
gccagttttgacgatgactaccggcgccagagggaccagtacagggacgattttgaccga
cggagcgtccacagcgaacagtcggcccacagtctgcacagctcccaaagccatcgcagc
cgtcgcagcagctttagctcccgctcacaacagagtgaggtgtacaggtctcagcctgac
ctgacagcggtttacgaccccgctgtttctaccctgcctgtggattactcctatgggcaa
tacccagagcagacggatcccggacagagcttcagccagtacccctacacctcggggtac
caggcagacgacagcacctgggtcgtcgctgagcagcctcctccacgtcccattactcca
gagaagtactcggtatcccaccgctgtgcccgcttcgggccaggcggtcagctgatccag
gtccttcccaacctcccctcggccggccagcctgctctagtggagatccacaacatggag
acgatgctacaggacacaccagaccaatccgagctgcgctccttccccggaccgcttttg
aaggaggagactcacaaggtcgacgtgataaagttctcccagaacaaaggcctggagtgt
gcccgcaacaacgacctcctggacaaggactcggctgccctcctctgggacttcatcgtg
ctgctgtgtaggcagaacgggaccgtggttgggactgacatagctgatctgttgctgaag
gagcatcgctcagtgtggttgcctggcaagtcacctaacgaggccaacctgattgacttc
aacaacgagccactggcgcgggccgaggaggagcctgggacgggaccactgtccctccta
tcagacaccttcatgactgtccccgagaacgtaggcaaggaaacggagcgcttcagggaa
ctgctgctatttggtcgcaaaaaggatgccctggaggcagccatgaagggagctctgtgg
ggccacgccctgctgctggccagtaagatggacagccggacacacgctcgcgtcatgacc
aggtttgcgaacagtctgcccatcaacgatcctctgcagacagtgtaccaactgatgtct
gggaggatgcccgcctcagccacttgctgtggagatgagaagtggggcgactggcgcccc
catctggccatggtgctgtccaacctgacccacactttggacctggacacgcgtaccatc
accaccatgggagacactctggcttccaaggggctaaccgatgcggcccacttctgttac
ctgatggcccaggttggtttgggggtgttcaccaaaaagagcaccaagatggttctaatc
ggctcaaaccacagtctgtcgttcttccagtttgcgtctaacgaagcgatccagaggacg
gaggcctatgagtatgcccagtctctgggctcccagccctgctccctgcccaacttccag
gtgttcaagctgatctatgcgtgtcgcctggccgaggccggcctgtgtgctcaggccttc
cattactgtgaggttatctccaggagcgtgctcatgcagccgtcctaccactctcctgtg
ttcaccagtcagctgatacagatgtctgagaagatgcgattcttcgatccacaactgaag
gagaaggcagatcaggaacttttcaacgagccagagtggctgattgatctgagacagctg
gatgggcagatgaggactggagtgattgcatacaatgcagacagggatactcctcagcag
tatgactgcagcacccccaattctgagttagaccagaccagcccgcctgagccatatgcc
cagcctctggacatggttggccacacctctgacaaccctctgatgacatcactcatgccc
ggaccgcctcagcaaggggtgcagctgatgcctccagctcccccaactatcctccaggac
ggaatggtctcccagccaccacaccccaacgagggggtccagttttacccagtacccccc
agtctccctggaccacctggccagatccctttatcagggttccctccccaaggctctggc
tttgtacaaccttaccaaccccagcagccccaaccggacaaaaatgacatgtttcctgga
gcccagcaccagcagatggcgccaccacagcatcagcaacagatgatgcccccaccacag
catcagcaacagatgatgcccccaccacagcatcagcaacagatgatgcccccacaaatg
cagcagccacaaaagatgccctctgacgattatccgctgacgggtccaccggaactacag
cctcctcccatgtccacctcgccacagaggaacaccttcacgcctcagatggacttctat
gaccaaatggctcacatgggcccaggaagaagatccaggactacttcacagtcctcaatg
caaatgcagcctccaggtcgccgctcccgcaccatgtcggaatcttccacacactccgga
ggacgagagaggagcaactcggcagccaagcagtcctctcctcctccaccctccatccct
gagcaggccaagaaggactcacctaaaaagggaggagggggtggcggtggcggttggctc
aactggctctataggaaggggaagaatgaagcccaccttccggatgacaagaacaaatct
attgtctgggacgagaagaaacagaaatgggtcaacttggatgagccagaggaggagtac
aagccccctcctcctcctccctcgggcttccctaagatgctgggacccataccgggacaa
gggggtcctggaggtccccctactggtgggccgcctgtcaacatgttctccaggagagca
ggtacaaagagccgctacgtggatgtcctgaacccaggtggaccccgtgccaagcccggt
ggatcggcacctgccccgtcagacttctttgccccgttggctcccatgcccatgccagcc
aacctgtttgtgcccggagcagaggaacagcagcccatggagggtaacgtcccagagaca
ggagggaaccaggaacagagcgaccctaaccccagtgctgtgccacagatgttcaaccca
acattgttaccgcccagtccagtggggcctcctattgccgctgggtccccgccaggagag
gtgcccctgactccacagcctcctccccagggagctccaccctctggaggcgtgacgttc
tataaccccgcccagtttgcacaggcgagtactccatcgggacggcttctgtctgggagg
ttgggcggtcagagggcatacccagtgctgaagtag
DBGET
integrated database retrieval system
