Salvelinus fontinalis (brook trout): 129819086
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Entry
129819086 CDS
T11136
Name
(RefSeq) neurogenic locus notch homolog protein 1-like isoform X1
KO
K02599
Notch 1
Organism
sfon Salvelinus fontinalis (brook trout)
Pathway
sfon04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
129819086
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EGF
hEGF
EGF_TEN
EGF_CA
Ank_2
Ank
Notch
NOD
NODP
EGF_2
Ank_4
Ank_3
Ank_5
cEGF
EGF_3
Motif
Other DBs
NCBI-GeneID:
129819086
NCBI-ProteinID:
XP_055731611
LinkDB
All DBs
Position
21:complement(50612594..50673197)
Genome browser
AA seq
2485 aa
AA seq
DB search
MYRFFVKLTFLIPVIVITQGLRCSLTTESCLNGGRCEASSDRNGECRCTSDYVGSRCQYS
NPCNPSPCRNGGECRAVSHGNTFEFHCKCRLGFSDQLCLTPTNHACMSSPCRNGGTCDLI
TLSDYRCRCPPGWSGKTCQIANPCASNPCANGGQCSPFESHYICACLPTFHGQTCKQDVN
ECAQMSSPCRNGGMCVNEVGSYHCRCPQEYTGANCETPYMPCSPSPCHNGGTCVQKGDTT
YDCSCLPGFTSQNCDHNIDDCPGHNCQNGGLCVDGVNTYNCQCPPHFTGQFCTENVDECE
MMPNTCQNGGTCHDTYGSFHCVCVNGWTGDDCSENIDDCASAACYHGATCHDRVASFFCE
CPHGRTGLLCHLDDACISNPCQKGSNCDTNPVNGKAICTCPPGYTGSACNQDIDECSLGA
NPCEHGGRCLNTKGSFQCKCLQGYEGPRCEMDVNECMSNPCQNDATCLDQIGGFHCICMP
GYEGVFCQINTDECASMPCLNNGKCIDRINSFHCECHKGFSGGLCQVDIDECASTPCMNG
AKCTDGPNKYSCECTEGYSGQHCETDINECYSDPCHYGTCKDGLATFTCYCHPGYTGRLC
ETNINECLSQPCQNGGTCQDRENTYICTCPKGTAGFNCEVNLDDCMSKPCDYGRCIDKIN
SYECACEPGYAGAMCNINTDECAINPCHNGGTCIDSINSFTCLCPEGYSDATCLLQVDEC
GSNPCIHGRCQDLVNGYRCFCDSGWGGPNCDINNNECESNPCMNGGTCKDMTSGYVCSCR
AGFSGPNCQTNINECASNPCLNQGTCIDDVAGYECNCLLPYTGETCETLLAPCSPRPCKN
GGVCHESEDYQSFSCLCPEGWQGQTCEIDINECVKSPCRSGATCHNMVGSYRCSCRPGYT
GQKCETDIDDCKPNPCSNGGLCRDGVDSFVCTCLPGFRGGRCEQDINECESNPCKNGANC
TDCVNSYTCTCPPGFSGINCENNTPDCTESSCFNGGTCVDGINTFTCLCLPGFTGSYCQH
DINECDSKPCLNGGTCLDSYGTYKCTCPHGYTGVNCQNLVRWCDSSPCKNGGSCWQQGSS
YTCQCQTGWTGLYCDVPSVSCEVAAKQQGVEVALLCRNSGHCLDAGNTHYCRCQAGYMGS
YCQEQVDECAPNPCQNGATCTDYLGGYSCECLPGYHGVNCSKEINECLSQPCQHGGTCID
LINTYKCSCPRGTQGIHCEINLDDCNPSTDPLTNEPKCFNKGQCVDRVGGYHCMCPAGYV
GERCEGDVNECLSDPCDLRGSYNCVQLTNSYRCECRTGYTGQRCDKVFDGCKGRPCRNGG
MCAVASNNPDGFICKCPPGYTGSSCEYDSHFCGSLNCRNGGTCVSGHLSPRCLCPAAFTG
PECQTPTNSPCNVNHCYNGGTCQRTSDAPFFHCSCPNNFNGLLCHILDYSFPGGFGRDIT
PPPEVEVSCEIPQCDEWAGNHICDSLCNNHACGWDGGDCSLNFDDPWQNCSAALQCWRYF
NDGKCDEQCKSPGCLYDGFDCQGQEGQCNPLYDQYCKDHYADGHCDQGCNNAECEWDGLD
CANNMPEKLADGHLVLVVHIPPEQLKNGLSTFLRELSSVLHTNVVFRRDANGEPMVFPYY
GSEQELAKHNVKRSTDSWPDWAVVPANMLGQVKESVGSMVNLPRQRRELDLMQVKGSVVY
LEIDNRQCYQQSTECFQSATDVAAFLGALASSGNLNVPYIEAVTSVQPTPASSELYPMYV
VFLGLAVLGFICLGVLVSRKRRREHGQLWFPEGFKVSEPSKKKRREPVGEDSVGLKPLKN
ILDISLMDDSQNGLWGEEEPDSRRFRFEEQAMLDLDDRTDHRQWTQQHLDAADLRIPSNA
PTPPQGEIENDCMDVNVRGPDGFTPLMIASCSGGGLEMGNSEEEEDPSAEIISDFIYQGA
NLHNQTDRTGETALHLAARYARSDAAKRLLESTADANVQDNMGRTPLHAAVAADAQGVFQ
ILIRNRATDLDARMHDGTTPLILAARLAVEGMVDELINCHADANAIDDFGKSALHWASAV
NNVDAAMVLLKNGANKDMQNNKEETPLFLAAREGSYETAKVLLEHFANREITDHLDQLPR
DIAQERMHHDIIRLLDEYNLVRSPGLHNGTLSATSLSPPLCSPNGYLGSLKPTAPGKKVR
KPGSGGKDGGKDMRIRKKKSLDGKGSLLDSSAVLSPVDSLESPHGYLSDVASPPMTSPFQ
QSPPMSFNHLQGSGDSHLGQMGKGQDMGRMPFDPNPPRLSHLPVSSPSSQGTITMAMGGA
GGRGQCDWHSRMHPGLGQQGGFNQGLPMSHGMMAPLRGVPTATLSRIMGYQGLQTSHLGT
PPHLMQQMHSRQNPQLQHQNSNSTTAGQVLSQSFLSSELSGSDLQQGNGAGRSVPIHTIL
PQETQILGTQFLTPPSQHSYSGPIDNTPNHQLQVPDHPFLTPSPGSPDQWSSSSPHSNMS
DWSEGISSPPMSLHSQMGLIPNQFK
NT seq
7458 nt
NT seq
+upstream
nt +downstream
nt
atgtatcgtttctttgtgaaactaacgtttcttattccagtcatcgtcataacacaaggt
ctaagatgctctctaactactgaatcatgtctgaatggagggaggtgtgaggcctcctct
gacagaaacggagaatgcaggtgtacaagtgactacgtgggtagccgctgccagtactcc
aacccctgcaatccctcaccatgccgcaacgggggcgagtgccgcgccgtatcccacggc
aacacttttgagttccactgcaaatgtcgactgggcttctccgaccagctgtgcctgacg
cctaccaaccatgcctgcatgagctcgccctgtcgcaatggagggacttgtgacctgatc
acgctctccgactaccgctgccgctgcccgcccggatggtcagggaagacatgccagatt
gccaacccctgtgcatccaacccctgtgccaacggtggacaatgctcacccttcgagtcc
cactacatctgcgcgtgcctgcccacctttcatggccagacctgcaagcaggacgtcaat
gagtgtgcccagatgtcgtcaccctgtcgcaacgggggcatgtgtgtgaatgaggtgggc
tcctaccactgccgctgcccccaggagtacacgggtgccaactgcgagaccccctacatg
ccctgcagcccctctccctgccacaatgggggcacttgcgtgcagaagggggacaccacc
tatgactgcagctgcctgccaggatttacaagtcagaattgtgatcacaacattgatgac
tgcccaggccacaattgtcagaatggtggcttgtgtgtggatggggtcaacacctacaac
tgccagtgcccccctcactttacaggccagttctgtaccgagaatgtggatgagtgtgag
atgatgccaaacacgtgccagaacggcggtacgtgccacgacacctatggcagcttccac
tgtgtctgtgtcaacggctggacgggcgacgactgcagtgagaacatcgacgactgtgcc
agcgcagcctgttatcacggtgccacatgccacgaccgcgtcgcctccttcttctgcgag
tgtccacatgggcgcacaggtttactgtgccatcttgacgacgcctgcatcagtaacccg
tgtcagaaaggctctaactgtgacaccaatcctgtcaacgggaaagccatctgtacctgc
cctccaggttacaccggctctgcatgcaaccaggacattgacgagtgttccttaggcgcc
aacccttgcgagcacggtgggcgctgcctgaacactaaaggctcgttccagtgcaagtgt
ctccagggttacgagggcccgcggtgcgagatggacgtcaacgagtgcatgtccaacccc
tgtcagaacgatgccacatgcctggaccagattggaggattccactgcatctgcatgcca
ggttatgagggggtgttttgccagatcaacactgacgagtgtgccagcatgccctgtctg
aacaacggcaagtgcatcgacaggatcaactccttccactgcgagtgccacaaaggcttc
tctggtggtctttgtcaggttgacatcgatgagtgtgccagcacgccctgcatgaacgga
gccaagtgtaccgacggccctaacaaatactcatgtgaatgcactgaaggttactctgga
cagcactgtgagactgacatcaacgagtgttactcggacccctgtcactatggcacgtgt
aaggacggcctggccaccttcacctgctactgtcaccctggttacacgggccgcctgtgc
gagaccaacatcaacgagtgtctgagccagccatgtcagaacggaggcacctgtcaggac
agggagaacacttacatctgcacatgccccaaaggcactgcaggctttaactgtgaggtg
aatctggatgactgtatgagcaagccctgtgactacgggaggtgcattgacaagatcaac
agctacgagtgtgcatgtgagccgggctacgcaggcgccatgtgcaacatcaataccgac
gagtgtgccatcaacccctgtcacaacggtggcacctgcatcgatagcatcaacagcttc
acatgcctgtgcccagagggctacagtgatgccacctgtctgttgcaggtggacgagtgt
ggcagcaacccctgcatccatggccgctgccaggatctggtcaatggctacaggtgtttc
tgtgactctggctggggtgggcctaactgtgacatcaacaacaacgagtgtgagtccaac
ccgtgtatgaacggtggcacctgcaaggatatgaccagtggatatgtttgtagctgccga
gccggcttcagtggacctaactgccaaactaacatcaacgagtgtgcctccaacccctgc
ctgaaccagggcacctgcattgacgacgtggccggctacgagtgcaactgcttactgccc
tataccggtgagacgtgtgagacactgctggccccatgcagcccccggccctgtaagaac
ggtggagtgtgtcatgagtcagaggactaccagagcttctcctgcctctgtccggaggga
tggcaaggtcaaacatgcgagatagacatcaacgaatgtgtgaaaagtccttgccgcagc
ggcgccacatgccacaacatggtgggcagctaccgatgcagctgccgtccgggctacacc
ggccagaagtgtgagacggacatcgacgactgcaagcccaacccctgcagtaatggaggt
ctgtgcagagacggagtggacagctttgtgtgcacttgtctgccagggttccgtggtggc
aggtgtgagcaggacattaacgagtgcgagagcaacccgtgtaagaacggggccaactgc
accgactgtgtcaactcctacacctgcacctgtccacccggtttcagtggcatcaactgc
gagaataacacccccgactgcacagagagctcttgcttcaacggtggcacctgtgtggac
ggcatcaataccttcacctgcctgtgtctgccaggcttcacaggcagctactgccagcac
gacatcaacgagtgtgactccaagccctgcctcaacggtggcacctgtctggacagctac
ggcacctacaagtgtacctgccctcatggctacactggagtcaactgccagaacctggtg
cggtggtgtgactcatctccctgtaagaacggaggctcgtgttggcagcagggctcctcg
tacacctgtcaatgtcagacgggatggaccggcctctactgtgatgtccccagtgtctcc
tgcgaggtggccgccaaacagcaaggtgtggaggtggctctcctgtgtcgtaactcgggc
cattgtctggatgctggcaacacccactactgccgctgccaagcgggctacatgggcagc
tactgccaggaacaggtggacgagtgcgcccccaacccttgccagaacggtgccacctgc
acagactacctgggagggtacagttgcgagtgtcttcctgggtaccacggggtgaactgc
tccaaggagatcaacgaatgtctgtctcagccctgtcagcacgggggcacctgcatcgac
ctcataaacacctacaaatgctcctgtcccagaggaacacaaggcattcactgtgagatc
aacctggatgactgtaacccttctacggaccctctgaccaatgagcccaagtgtttcaac
aagggtcagtgtgtggacagagtggggggctaccactgcatgtgccccgctggctacgta
ggggagcgctgcgagggtgacgtcaacgagtgcctgtcggacccctgcgacctgcgaggc
tcctacaactgtgttcagctcaccaacagctaccgctgcgagtgtcgcactggatacaca
ggccagcgctgtgacaaggtgtttgatggctgtaaggggagaccgtgtaggaacggagga
atgtgtgcagtggccagtaacaaccccgacggattcatctgcaaatgcccaccgggttac
acaggctcctcctgcgaatacgactcacacttctgtggtagcctcaactgcagaaatggt
ggcacctgtgtctccggccacctgagccctcgttgcttgtgccccgcggcttttaccggc
cccgagtgccagactcccacgaacagcccctgcaacgtcaaccactgctacaacgggggc
acttgccagagaacctccgatgcacccttcttccactgcagctgcccgaacaacttcaat
ggcctgctctgccacatccttgattactcctttcccggtgggttcggccgggacatcaca
ccaccacccgaggtagaggtgagctgcgagatcccgcagtgcgacgagtgggcgggcaac
cacatctgtgactcgctgtgcaacaaccacgcctgcggctgggacggcggcgactgctca
ctcaacttcgatgacccgtggcagaactgctcggcggctctgcagtgctggcggtacttc
aatgacgggaagtgcgacgagcagtgcaaaagccccgggtgtctctacgacggcttcgac
tgccagggacaggagggacagtgcaacccgctgtatgaccagtactgtaaggaccactat
gcggacggccactgcgaccagggctgtaacaacgcagagtgcgagtgggacggcctggac
tgcgccaacaacatgcccgagaagctagctgacggccacctggtccttgtggtccacatc
ccccccgagcagctaaaaaatggtttatccacgttcctccgtgagctcagcagcgttttg
cacaccaacgtggtgttccggcgcgacgcaaacggagagcccatggtgttcccctactat
ggcagcgagcaggagctggccaagcacaacgtgaagcgttccaccgacagctggcccgac
tgggcggtcgtgccggccaacatgctgggccaggtgaaggagagcgtgggatccatggtg
aacctgccccgccagcgccgagaattggacctcatgcaggtcaaagggtcggtggtatac
ctggagattgataaccgccagtgttaccagcagtccacggaatgcttccagagcgccacc
gacgtcgccgcgttcctgggagcactggcctccagcgggaatctcaatgttccttacatc
gaggcagtcaccagtgtgcagcccacccctgcatcctctgagctataccccatgtacgtg
gtgttcctggggctggctgtactgggcttcatctgcctgggggtgctggtgtcacgtaaa
cgccgacgggagcacggacagctctggttccctgagggcttcaaagtgtctgagcccagc
aagaagaaacgcagagagcccgtaggagaggactctgtgggactcaagccactgaagaac
attttggacatttctctgatggacgacagccagaatggattgtggggagaggaggagcca
gactcgagacgctttaggtttgaggagcaggcaatgttggacctagatgaccgcactgac
cacagacagtggacccagcaacacctggacgcggctgatctacggatcccttccaacgcc
cccacgcctccccagggagagatcgagaatgactgcatggacgtcaatgtccgaggccca
gacggtttcactcctctaatgatcgcatcgtgcagcgggggaggcttggagatggggaac
agtgaggaggaggaggacccttcggctgagataatctctgacttcatctaccagggagcc
aacctgcacaaccagacggaccgcacaggcgagaccgctcttcaccttgccgcccgctac
gcccgttccgacgccgccaagcgactgctggagtccaccgccgacgccaacgtccaggac
aacatggggcgcactccactgcacgccgctgtggctgcagacgcacagggagtcttccag
attctgatccggaaccgggcaactgatcttgacgcccgcatgcatgatggaacgactcct
ctgatcctggctgcccgattggctgtggaaggcatggtggatgagcttatcaactgccat
gctgatgccaacgccatcgatgactttggtaaatctgcccttcattgggcttcagctgtc
aacaacgtggatgctgccatggtgttgttgaagaatggcgccaacaaagacatgcagaac
aacaaggaggaaactcctctctttctggcagccagagagggcagttatgagacggccaag
gtactgctggagcactttgccaaccgtgagatcaccgaccacctggaccagctgccccgg
gacatcgcccaggagcgaatgcaccatgacatcatccgtctgctcgatgaatacaacctg
gtgaggagcccagggctccataatgggaccctgagcgccaccagcctgtcccctcctctg
tgctcccccaacggatacctgggcagcctcaagcccaccgccccaggcaagaaggtccgc
aagccaggctctggagggaaggatggtggcaaagatatgaggatacggaagaagaagtcc
ctggacgggaagggcagtctgctggacagctcagccgttctctcgcccgtcgactccctg
gagtcgccccacgggtacctgtccgacgtggcgtcgccgccaatgacatcgccattccag
cagtctccgcccatgtcgttcaaccacctgcaaggcagtggagacagccacctgggtcag
atgggcaaggggcaggacatggggcgtatgccctttgacccgaaccctccccgcctgtcc
cacctgcctgtttctagccccagcagccagggaaccatcactatggccatgggcggagct
gggggaagaggacagtgtgattggcactccaggatgcacccgggtctcgggcagcagggt
ggcttcaaccaaggtcttcccatgtcccacggtatgatggctcccctccgcggggtcccc
actgccaccctgtcccggatcatgggctaccagggcctgcagaccagccatctgggcacg
ccgccccacctcatgcagcagatgcactcccggcagaacccacagctccagcaccagaac
tccaactccaccacggccggccaggtcctgagccagagtttcctgagcagcgagctgagc
ggctcggacctgcagcagggcaacggggcgggtcgctcggtccccatccacaccatcctc
ccccaggagacccagattctcggcacacagttcctcaccccaccctcccagcacagctat
tccggcccaatagacaacacacccaatcaccagcttcaggtgcctgaccacccctttcta
actccctcccccggatcccctgaccaatggtccagctcctctccacattccaatatgtct
gattggtcagagggcatctccagtcctccaatgagtttgcattctcagatgggccttatc
cctaaccagtttaagtag
DBGET
integrated database retrieval system
