Salvelinus fontinalis (brook trout): 129819106
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Entry
129819106 CDS
T11136
Name
(RefSeq) netrin receptor DCC-like
KO
K06765
deleted in colorectal carcinoma
Organism
sfon Salvelinus fontinalis (brook trout)
Pathway
sfon04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
129819106
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
sfon04515
]
129819106
Cell adhesion molecules [BR:
sfon04515
]
Immunoglobulin superfamily
DCC/UNC5 family
129819106
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Neogenin_C
fn3
Pur_ac_phosph_N
FN3_DSCAM-DSCAML_C
Fn3_VIN3
Ig_Rha78A_N
Interfer-bind
fn3_SORL1
CRLF2-like_D2
Protocadherin
GH101_dom-5
EphA2_TM
DUF4998
TM_ErbB1
CytochromB561_N
Herpes_UL74
Motif
Other DBs
NCBI-GeneID:
129819106
NCBI-ProteinID:
XP_055731650
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Position
21:12139..253991
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AA seq
1177 aa
AA seq
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MEARWLPHSAPIPGTKVGIRPGTKVGISPGTKVGIIPGTKVGIRPGTKVGISPGTKVGIS
PGTKVGISPGTKVGISPGTKVGISPGTKVGIGLAPTYLEPVASPTPAPQVPSPESPTSLT
YSSPPPPVVPSSGVLLPSAPRDVAPVLVSSRFVRLSWRPPQETRGTVQTYGIYYSQDTVN
RERSVNVSEAETLQMTVSNLKPEETYSFRVVAYNDNGPGERSETLRLTTQPELQVPGPVE
NLHVEPISPTSIQASWDAPAYANGPLLGYRLLWTEIPSGKEQSVEVNGQRYKMEGLKKFT
EYSLRVLAMNRYGPGVTTEDMSITTLSDVPSAPPQNISLEVVLSRSIKVSWQPPPPNSQN
GFITGYKLRYRKTGRRGDQEAIEPNNFWYLFTGLEKGSQYSFQVAAMTANGTGPASEWFT
AETPENDLDESQVPNQPSSLHVRPLPNSIIMSWTPPLNPNILVRGYIIGYGVGSPYAETV
RVDSKQRYYSIENLEPSSHYVISLKAFNNAGEGVPLYESAVTRSITDPIDPSDDDLFHLF
DKYPTPIPDTSTPMIPPVGVQAVALTPDSVRVSWADNSMTKNQKTTEVRYYSVKWKTSYS
TSGKFKSADTTALSHTVTGLKPNTMYEFAVMVTKGRKSSTWSMTAHATTYEAAPSSAPKD
LTVISREGRPRAILISWQPPMETNGRITGYILYYTLDKNMPIDDWVMESISGDRLTHQVM
DLNLDTVYYFRIQAKNAKGVGPLSDPIHFRTNKVEHPDKMANDQGRHGDGGYWPSDNNLI
DRSSLNDIGQMRPPHGSVTPQKNSNLLVIIVVSVGAVTVVVVVIVALICTRRSSAQQRKK
RATHSTGKRKGSQKDLRPPDLWIHHEEMELKNMEKPASAAPSGRDSPIQGSIQDIRSQSV
SHSQSESQMGSKSSHSGGDNDEASSCISTLERSLAARRATRTKLLIPMDSQPSNTPVVSA
IPVPTLEGSQYPGILPSPTCGYSHGTLTTHPKFTLRAMPFPSLTVDRSYTTGGTISTEGS
TTLGVQQQTLIGSSSSQPGIGGKGELSLPGTEEVGGTSTRSIPTACVRPTHPLRSFANPL
LPPPMGTIDPKVYTPMMPHSSASLPKPTVKTASLGQAGKARSPLLPVSVPTAPEVGEEGQ
KQTDDSANVYEQDDLSEQMASLEGLMKQLNAITGSAF
NT seq
3534 nt
NT seq
+upstream
nt +downstream
nt
atggaggcgcggtggcttccacacagcgcccccattcctggcaccaaagtgggcattaga
cctggcaccaaagtgggcattagtcctggcaccaaagtgggcattattcctggcaccaaa
gtgggcattagacctggcaccaaagtgggcattagtcctggcaccaaagtgggcattagt
cctggcaccaaagtgggcattagtcctggcaccaaagtgggcattagtcctggcaccaaa
gtgggcattagtcctggcaccaaagtgggcattggactggcaccaacctacctagaacca
gtagccagcccaacaccagctcctcaggtccctagccctgagtcccctacttctttgact
tactcctctcctcccccaccagttgtccccagctcaggtgtcctcctcccctctgctccc
cgtgacgtggcccctgtcctagtgtccagccgttttgtccgcctcagctggcgccccccg
caggagaccagaggaactgtccagacctacggcatctactactcccaggacacggtcaac
agggagaggtctgtgaacgtgtcggaggcagagaccctccagatgactgtcagtaacctg
aagccagaggagacctactccttcagagtggtggcctacaacgacaacggccctggagag
agatccgagacactcagactcaccacacagcccgagttgcaggtccctgggccggtagag
aacctccacgtagagcccatctctcccacctccatccaggcctcctgggacgccccggcc
tacgccaacgggcccctgctggggtacagactgctctggactgagataccctctgggaag
gaacagagtgtggaggtgaacgggcagaggtataagatggaggggctgaagaagtttaca
gagtactccttgcgtgtcttggctatgaaccgttatggccctggggtcaccacagaggac
atgagcatcaccacgctgtctgacgtgccaagtgctccaccacaaaacatctccttggaa
gtggtcctctcaagaagcatcaaggtgagctggcagccccctcctcccaacagccagaac
gggttcatcaccggctacaaactccggtaccggaagaccggtcgacgaggagaccaggag
gccatcgaacctaacaacttctggtacctgttcacagggctggagaaaggcagtcagtac
agtttccaggtggctgccatgacagctaacggcacgggcccagccagcgagtggttcacc
gcagaaacgccagagaatgaccttgatgagagccaagtcccgaatcaaccgagttccctc
cacgtccgacccctgcccaacagcatcatcatgagctggactcctcccctcaaccccaac
atcctagtacggggctacatcattggctacggagtaggaagtccctacgctgagacggtc
agggtagacagcaagcagcgatactactccatagaaaacctggagcccagttcccactat
gtcatctccctgaaagccttcaacaatgcaggagagggggtccccctgtacgagagcgct
gtgaccagatctataacagaccccattgacccgtcagacgacgatctgttccatctgttt
gataaatatcctactcccataccagatacatccacacccatgatccccccagtaggtgtc
caggccgtggccttgaccccagactctgtcagggtcagctgggcagacaactccatgacc
aagaaccagaagaccactgaggtccgctactactctgtcaagtggaagaccagctactcc
actagcgggaagttcaagtctgcagacacaacagccctcagccacaccgtcactggcctc
aagcccaacaccatgtacgagttcgctgtcatggttaccaagggccgcaagtctagcacg
tggagtatgaccgctcatgccaccacttacgaagcagcccccagctccgcccccaaggac
ctgacggtcatcagtcgtgaggggagacccagagctattctgattagctggcaacccccc
atggagaccaacggacggatcacaggctatatcctgtactacaccctggacaagaacatg
cctatagatgactgggtaatggagagtatcagtggagaccgtctaacccaccaggtgatg
gacctgaacctggacaccgtctactacttcaggatccaggctaagaatgccaagggagtg
ggtcccctgtcagaccccatccacttcaggactaacaaagtggaacatccagacaagatg
gccaacgatcaaggtcgccatggagatggcggctactggccttctgacaacaacctgatt
gataggagcagtttgaacgacattggtcagatgcgtcctccccacggcagtgtgacgccc
cagaagaacagcaacctcctggtcatcatcgtggtctccgtgggagccgttaccgtggta
gtggtcgtcatagtagcgctgatctgcacccggcgttcctcggcacaacagaggaagaag
cgtgccacccacagtacagggaagaggaaaggtagtcagaaggacctgagacctccagac
ctgtggatccatcacgaggagatggaactgaagaacatggagaagcctgccagcgccgcc
ccctccggacgcgattcgcccatccagggttctatccaggatatcaggtctcagtctgtc
agtcacagccaatcagagagccagatgggcagtaagagcagccactcaggtggagacaac
gatgaggcttccagctgcatctctacgttagagcgctctctagctgccaggagggcaaca
cgtaccaagctgttgatccccatggactctcagcctagcaacacccctgttgtcagtgcc
atcccagtgccaaccctggagggcagccagtaccctggcattctgccctcgcccacctgc
gggtacagtcatggtactttgaccactcaccccaagttcaccctgagagcgatgcccttc
cccagcctcaccgtggaccgcagctacacaacaggtggaacgatatcgacagagggcagt
accacgctgggggtacagcagcagaccttgattggcagcagtagcagtcagccaggtata
ggaggtaaaggagagctctctctgcctggcacagaggaggttggaggtacctcgacccgt
tccatccccaccgcctgcgtcaggcccacgcaccccttacgaagcttcgccaaccctctc
ctgccaccacccatgggcaccatcgaccccaaggtctacacacccatgatgccacattca
agtgccagccttcccaagccaacggtaaaaacagcatctctggggcaagctggcaaggcc
agatcaccactactaccggtctctgtgccaacagccccagaggtgggtgaagagggacag
aaacagacagatgactcagccaatgtttacgaacaggacgacttgagtgaacagatggca
agcctagagggactcatgaagcaactcaacgccatcactggctctgccttttaa
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