Salvelinus fontinalis (brook trout): 129819120
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Entry
129819120 CDS
T11136
Symbol
cadm1a
Name
(RefSeq) cell adhesion molecule 1a isoform X1
KO
K06781
cell adhesion molecule 1
Organism
sfon Salvelinus fontinalis (brook trout)
Pathway
sfon04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
129819120 (cadm1a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
sfon04515
]
129819120 (cadm1a)
Cell adhesion molecules [BR:
sfon04515
]
Immunoglobulin superfamily
Nectin family
129819120 (cadm1a)
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GFIT
Motif
Pfam:
Ig_3
I-set
Ig_2
ig
C2-set_2
V-set
Ig_5
C1-set
C2-set_3
Adhes-Ig_like
Syndecan
Motif
Other DBs
NCBI-GeneID:
129819120
NCBI-ProteinID:
XP_055731662
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Position
2:42169973..42595405
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AA seq
441 aa
AA seq
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MAITGNGSLATLLFLFMIPAALHKGAAQYPVQSQNLVTDNVAVVEGDVAVISCRVKNNDD
SVIQLLNPNRQTIYFRDVRPLKDARFQLVNFSDNELRVSLSNVTLSDEGRYVCQLYTDPP
QEAYADITVLIPPGNPIIESREGQVIEGNETEMTCTAMGSKPAATIRWMKGDKELQGKSK
VEETYDTMFTVTSQLTFTVTKEDDGVPVVCIVDHPAVKDVQAQTYLVVHYKPEVKIVVEF
PDGLPREGQNMELSCQAKGKPHPQQINWVKVDDDLPSHALITGPDLYIENLNKTYNGTYR
CFAANSVGESYDDYILYVYDAPTTTPIPTTATTTTPTTTTISLPEATADTTPSTEPAAHD
SRAGEGAPRAVDHAVIGGVVAVVVFAMLCLLIILGRYFARHKGTYFTHEAKGADDAADAD
TAIINAEGGHNNSDEKKEYYI
NT seq
1326 nt
NT seq
+upstream
nt +downstream
nt
atggcgatcacaggcaacggatctctcgctactcttctctttttgttcatgattccagca
gctcttcataaaggagctgctcagtacccagtccagagtcagaacctggtgacggacaat
gtggcggtggtggagggagacgtggccgtcatcagctgccgggtgaagaacaacgacgac
tcggtcatccagctcctcaaccccaacagacagacaatctatttcagagacgtccgaccc
ctgaaagatgcccgcttccagctggtgaacttctcggacaatgagctgcgggtgtctctg
tccaacgtgaccctgtctgacgaggggagatacgtgtgccagctgtacacagaccctcca
caggaggcctatgctgacatcactgtgctgatccctccaggcaacccaatcatcgagtcc
cgggaggggcaggtaatcgagggcaatgagacagagatgacctgcaccgccatgggcagc
aagcccgccgccaccatcagatggatgaagggagacaaagagctccaaggtaagtcgaag
gtagaggagacgtacgacaccatgttcaccgtgaccagccagctgacgttcaccgtcacc
aaggaggacgacggtgtgcccgtggtgtgcatcgtggaccacccagccgtcaaagatgtc
caggcccagacgtaccttgtggtacattataaaccagaggtgaagattgtagtggagttt
cctgatgggctgccaagggaaggacagaacatggagctgtcatgccaggccaaaggcaaa
ccccatccccagcagatcaactgggtgaaggtggacgacgatctgccctcacacgccctc
atcaccggcccggacctgtacatcgagaacctcaacaagacctacaacggcacctaccgc
tgcttcgctgccaactcagtgggcgagtcgtatgacgactacatcctctatgtctatgat
gccccaaccactacccctatacccactacagctactaccaccactcccaccaccacaacc
atctccctccctgaagccactgcagacactacgcccagcactgaacccgcagcacacgat
tccagagctggagagggagcaccgagagccgtcgaccatgcagtcattggaggagtggtg
gctgtggttgtctttgccatgctctgtctactcatcattttgggacggtactttgcaaga
cacaaaggtacctacttcacgcatgaagctaaaggagccgacgatgcagcagatgcagac
acggccattatcaacgcagaggggggccacaacaactcggacgagaagaaggagtactac
atatag
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