Salvelinus fontinalis (brook trout): 129819582
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Entry
129819582 CDS
T11136
Symbol
vps11
Name
(RefSeq) vacuolar protein sorting-associated protein 11 homolog isoform X1
KO
K20179
vacuolar protein sorting-associated protein 11
Organism
sfon Salvelinus fontinalis (brook trout)
Pathway
sfon04140
Autophagy - animal
sfon04148
Efferocytosis
sfon05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
129819582 (vps11)
04148 Efferocytosis
129819582 (vps11)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
129819582 (vps11)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sfon04131
]
129819582 (vps11)
Membrane trafficking [BR:
sfon04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
129819582 (vps11)
Hops complex
129819582 (vps11)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PEP5_VPS11_N
TPR_PEP5_VPS11
VPS11_N
VPS11_C
TPR_Vps41
Clathrin
zf-C3HC4_2
zf-rbx1
zf-RING_2
zf-C3H2C3
zf-C3HC4
Beta-prop_EML_2
TPR_GEMI5
zf-RING_5
WD40_CDC20-Fz
zf-ANAPC11
ToxA_N
zf-RING-like
Kbp-5
DLP_helical
DivIC
zf_RING_Vps8_fungal
Motif
Other DBs
NCBI-GeneID:
129819582
NCBI-ProteinID:
XP_055731923
LinkDB
All DBs
Position
2:45445841..45469517
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AA seq
929 aa
AA seq
DB search
MAAFLQWRRFVFFDKETVKDAGDNGKNFVLPVGISACDSGRGHIVLGDMDGQIWFLTRSL
QLSSFQAYKLRVTHLYQLKQHSILVTVGQDEQGINPLVKVWNLDKRDSGNPLCTRIFPAI
PGNKPTEVSCLSVHENLNFMAIGFTDGSVVLTKGDITRDRHSKTLTLHEGTCPITGLAFR
QQCKVTHLFVATLEKVHCYTLSVKEYPKLELDTHGCALRCSALTDPSQDSQFIVAGDECV
YLYQPDERGPCFAFDGHKLLAHWHRGYLLLLTRDTKSPNKSEFGSRETSPSEKQILTIYD
LDNKFIAYSASFDDIIDVLAEWGSFYILTRDGKMFVLQEKDTQTKLEMLFKKNLFVMAIN
LAKSQHLDSDGLSEIFRQYGDHLYVKGDHDGAIQQYIRTIRKLEPSYVIRKFLDAQRIHN
LTAYLQALHRQSLANADHTTLLLNCYTKLKDSSKLEEFIKSSESEVHFDVEIAIKVLRQA
GYHSHAVFLAERHQHHKWYLKIQLEDLKNYQEALRYIGRLPFDQAESNMKRYGKTLMHHV
PDGTTLLLKGLCTDYQPSRDAMERDSLDRGPAVAKKANSEEFISVFANNPRELRAFLEHM
IEVEPFSSQGVYDTLLELRLQDWAHEQDSERKKVLQGAALSLLRSDNTVFDKALVLCQMH
NFKEGVLYLYEKGKLYQQIMHYHMQNEEYGKVVEACKRYGDQEVCLWEQALGYFARKEED
CKAYISQVLEHIDQNNLMPPLLVVQTLAHNSTATLSVIKDYLINKLQRESQQIEDDERKI
RQYREETAHLRAEIQELRSSAKIFQKTKCSMCNSPLELPSVHFLCSHSFHQHCFESYAES
EAECPTCTPENRKVMDMLRAQDQKRDLHDHFTRQLRCSNDGFSVVADYFGRGVFNKLTLV
TDPPGSKVGAGSLEADLQRDLLIHTKRNT
NT seq
2790 nt
NT seq
+upstream
nt +downstream
nt
atggctgcgttcttacagtggagacgatttgtgttttttgataaagagacggtgaaggac
gctggagataatgggaagaacttcgtcctccccgttggcatatctgcatgtgactcgggc
cggggccacatcgttcttggagatatggacggtcagatctggtttttgacacgctcccta
cagttgtcctcctttcaggcttacaagctgagagtgacccacctataccagctcaagcag
cacagcattttggtcacggttgggcaggacgagcaaggaattaaccccctggtgaaggta
tggaatctggacaagcgtgacagcgggaatcctctgtgtaccagaatattcccagcaatt
cctgggaacaaaccaacagaggtgtcctgcctcagtgtacacgagaacctaaactttatg
gccattggcttcacagatggcagtgtggtgttgacaaagggtgacataacccgggacagg
cacagtaaaaccctgacactgcatgagggcacctgtccaatcacgggcctcgctttccgt
cagcagtgcaaagtcactcacttatttgttgccactctggaaaaagtccactgctacact
ttgtcggtgaaggagtaccctaaactggaactggacacccacggctgtgcgctgcgttgc
tctgcgctcacagacccctcccaggactcccagtttattgtcgcgggggacgagtgtgtg
tacctttaccagcctgatgaacgtgggccctgtttcgcttttgacgggcacaagctactg
gcccactggcaccggggctacctcctgctgctcaccagggacaccaagtctcccaacaag
tctgaatttgggagtagagagacatctccttcggagaaacaaatcttgacaatctatgac
ctggacaacaagttcattgcctacagcgcttcctttgatgacatcatcgacgttctggcc
gaatggggctccttctacatcctgactcgggatggaaagatgtttgtgctgcaggagaaa
gacactcagaccaagctagagatgctcttcaagaagaatctgtttgtgatggccatcaac
ctggctaagagccagcacttggacagtgacgggctgtctgagatcttcaggcagtacggt
gaccacctttacgtgaagggggaccacgatggagccatccaacagtacatccgcacaatc
aggaagctggagccctcttacgtaatccggaagtttctggatgctcagaggatccacaac
ctgacggcctacctccaggccctgcaccggcagtcgctggccaatgccgaccacaccacc
ctgctgctcaactgctacaccaagctcaaggacagctctaagcttgaagagttcatcaag
agcagcgagagcgaggtccacttcgacgtggagattgccatcaaggtgctgcgccaggca
ggctaccacagtcacgcagtcttcttggccgagaggcaccagcaccacaagtggtacctg
aagatccagcttgaggacctgaagaactaccaggaggctttgcgctacattggacgactt
cctttcgaccaggcagagagcaacatgaaacgctacggcaagaccctgatgcaccatgtc
cccgacggcaccacactgcttctcaagggcctgtgtacagactaccagcccagccgggat
gccatggaaagagacagtctggacagaggcccggcggtggccaagaaggcaaattcagag
gagttcatctctgtgtttgctaataacccgcgggagctaagggccttcctggagcacatg
attgaggtggagcccttctcctctcagggagtgtatgacacactgctagaactacggctg
caggactgggcacatgaacaagactctgagaggaagaaggtcctgcagggggcagcactg
tccttgctgaggagcgacaacaccgtatttgacaaggccctcgttctgtgccagatgcac
aacttcaaagaaggggtcctgtacctctatgagaagggcaaactgtaccagcagatcatg
cactaccacatgcagaatgaggagtatggcaaagtagtagaggcctgcaagcgctacggc
gaccaggaagtatgcttgtgggagcaggcgctgggatactttgcccgcaaagaggaggac
tgcaaggcctacatcagccaagtcctggagcacattgaccagaacaacctgatgcctccc
ctattggtggtgcagacgctggcacacaactccacagccacgctgtcggtcatcaaagac
tacctgatcaacaagctgcagagggagagccagcagattgaggacgatgagcgcaagatc
cgccagtaccgtgaggagacggcccacctccgcgccgagatccaggaactcagaagcagc
gcaaagattttccagaagaccaagtgcagcatgtgcaacagccccctcgagctgccctct
gttcactttctgtgcagtcactccttccaccagcactgctttgagagctacgccgagagt
gaggccgagtgtcccacctgcacaccggaaaaccggaaggtcatggacatgctgcgggcc
caggaccagaaacgagacctgcatgaccacttcaccagacagctgcggtgctccaatgat
ggtttctccgtggtggcggactactttggccgtggggtgttcaacaagctaaccctggtc
accgacccgccgggcagcaaggtgggggcgggaagcctggaggcagacctgcagagggac
ctactcatccacaccaagaggaacacttga
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