Salvelinus fontinalis (brook trout): 129819659
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Entry
129819659 CDS
T11136
Name
(RefSeq) elongation factor 1-alpha, oocyte form
KO
K03231
elongation factor 1-alpha
Organism
sfon Salvelinus fontinalis (brook trout)
Pathway
sfon03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
129819659
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sfon03019
]
129819659
03016 Transfer RNA biogenesis [BR:
sfon03016
]
129819659
03012 Translation factors [BR:
sfon03012
]
129819659
04131 Membrane trafficking [BR:
sfon04131
]
129819659
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sfon04147
]
129819659
Messenger RNA biogenesis [BR:
sfon03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
129819659
Transfer RNA biogenesis [BR:
sfon03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
129819659
Translation factors [BR:
sfon03012
]
Eukaryotic type
Elongation factors
129819659
Membrane trafficking [BR:
sfon04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Other CMA associated proteins
129819659
Exosome [BR:
sfon04147
]
Exosomal proteins
Proteins found in most exosomes
129819659
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
MMR_HSR1
GTP_EFTU_D4
Gtr1_RagA
EF-G_D2
Motif
Other DBs
NCBI-GeneID:
129819659
NCBI-ProteinID:
XP_055732085
LinkDB
All DBs
Position
22:7469589..7473149
Genome browser
AA seq
461 aa
AA seq
DB search
MGKEKIHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAAEMGKGSFKYAWVL
DKLKAERERGITIDISLWKFETGRYYVTIIDAPGHRDFIKNMITGTSQADCAVLVVAGGV
GEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSQKRFEEIQKEVSTYIKK
IGYNPATVAFVPISGWHGDNMLEASPNMAWFKGWKVERKDGNSNGVTLLEALDSIMPPSR
PTDKPLRLPLQDVYKIGGIGTVPVGRVETGTLKAGMIVTFAPANVTTEVKSVEMHHETLE
SAMPGDNVGFNVKNVSVKDIRRGNVAGDSKNDPPMEAGTFTAQVIILNHPGQISQGYAPV
LDCHTAHIACKFSELKEKIDRRSGKKLEDAPKFLKSGDAAIVDMIPGKPMCVESFQEYPP
LGRFAVRDMRQTVAVGVIKAVDKKAASSGKVTKSAVKAGKK
NT seq
1386 nt
NT seq
+upstream
nt +downstream
nt
atgggaaaggaaaagatccacatcaacatcgtggtcattggccatgtcgactccggcaag
tccaccaccaccggccatctgatctacaaatgcgggggtattgacaagagaaccattgag
aagttcgagaaggaggctgctgagatgggtaagggctctttcaagtatgcctgggtgctg
gacaagctgaaggctgagcgtgagcgtggtatcacaattgacatttccctgtggaagttc
gagactggcaggtactacgtcacaatcattgatgcccccggacacagagacttcatcaag
aacatgatcactggtacatctcaggctgattgtgctgtgctggtcgttgctggtggtgtt
ggtgagtttgaggccggcatctcaaagaacgggcagactcgtgagcacgctctccttgct
ttcactctgggagtgaagcagctcatcgttggagtcaacaagatggactccacagagccc
ccctacagccagaagcgttttgaggaaatccagaaggaggtcagcacctacatcaagaag
atcggctataaccctgccacagtcgcttttgtgcccatctctgggtggcatggggacaac
atgctggaggctagccctaacatggcctggttcaagggatggaaggtcgagcgtaaggat
ggtaactccaatggggtgactctgctggaggccctggacagcatcatgcccccatcccgg
cccacagacaagccccttcgtctgcccctccaggatgtttacaaaatcggtggtattgga
actgtacctgtgggccgtgtggagacgggcaccctcaaggccggtatgatcgtcaccttc
gcccccgctaatgtcaccactgaagtcaagtctgtggagatgcaccacgagaccctggaa
tcggctatgcccggtgacaacgtcggcttcaacgtcaagaacgtgtccgtcaaggatatc
cgtcgtggcaacgtagctggagacagcaagaacgaccctccaatggaggctggcactttc
actgctcaagttatcatcctgaaccaccctggccagatctcccagggctatgcccctgtg
ctggattgccatactgctcacatcgcctgcaagttcagtgagctcaaggagaagatcgac
cgtcggtccggcaagaagcttgaagatgcccccaagttcctgaagtctggggacgctgct
atcgttgacatgatccccggcaagcccatgtgtgtggagagtttccaggaatacccccct
cttggtcgtttcgctgtgcgtgacatgaggcagacagtcgctgtcggtgtcatcaaggct
gttgacaagaaggccgcctcaagcggaaaggtcacaaagtctgccgttaaggccggtaaa
aagtga
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