Salvelinus fontinalis (brook trout): 129819729
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Entry
129819729 CDS
T11136
Symbol
abca5
Name
(RefSeq) ATP-binding cassette sub-family A member 5 isoform X1
KO
K05648
ATP-binding cassette, subfamily A (ABC1), member 5
Organism
sfon Salvelinus fontinalis (brook trout)
Pathway
sfon02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
129819729 (abca5)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sfon02000
]
129819729 (abca5)
Transporters [BR:
sfon02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA5, 6, 8, 9, 10 subgroups
129819729 (abca5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
AAA_21
R1_ABCA1
RsgA_GTPase
AAA_29
AAA_23
MMR_HSR1
Motif
Other DBs
NCBI-GeneID:
129819729
NCBI-ProteinID:
XP_055732282
LinkDB
All DBs
Position
1:15021190..15155246
Genome browser
AA seq
1695 aa
AA seq
DB search
MYFIPIAPSCGERPHSCPRQLKHAGNNVSMQPNIIRRDAGVWHQTKSLLYKNLLIKWRTK
QQSLQELILPLLLLCLLILISTLNPHVYYGGISTMELEREDYHLLKGLGYTPINNATNHI
MEEVAQEMHLQDRLEMFSSEEDLENASLYEPSGYVGVVFMGSTPTSYRLRFPYNHLPLPS
DYTESIANCFASSVNCRAANYWYSGFIRLQTLIDAAIIQMQTKRSVWSEMDHLRVVMMGQ
PGSVEVQKFPHALISIYLVLAFTPFITFLIVNVAAEKEHRLKDTMTMMGLYDSAFWLSWG
LLYAALVTTMSILMSIIATYTALFPNSDFIVIFLLIFLYGISSIFFSFMLTPLFKKPKFA
STVGSMLTVVFGCLSLFTVLMKDFPQPLVWVLCLLSPSAFSIGIAQVVYLEAQGDGAVFA
TLANGPHPLYAPLLMLVLDCILYLLLAVYLDQVLPGEFGMRRSLVYFMKPSYWSKRSKRY
VEVSSVYETEVNGAPGVDESVEPVSPEFRGKEAIRINNIRKVYKEKDSIVEALRGLTFDI
YEGQITALLGHSGAGKSTLMNILCGICPPTDGHASIYGSPVAEIAEGAEMRQLVGICPQF
NIIFDVLTVEEHLRIFAAIKGILPSDIDNEVSKVLKDLDLEKIMDAQAKNLSGGQKRKLS
VGIAILGDPKILLLDEPTAGMDPCSRHQVWSLLKSRRAGRVTVLSTHYMDEADILADRKA
VISQGQLKCVGSSLYLKTKCGVGYHLRMSIGERCEVDGVTSLVKHHVPKAQLSRQQEAEL
TFTLPFESMDTFSGLFSELDCRPDLGISNYGVSMTTLEDVFLRLEAEAEVDQADYSVFNQ
EQVEDEGDASSLDDTDQRLLTFSDSKPEAVQGHALWRQQFSTVAWLHMLNMQRERKAFVY
TLALFLVFLAAVLVLSLATGNIQIHAPERQFVPIYLLRPNQAPRKYTTSLLVQNSSGSDI
SDFIRNLESQDIKVEMMKNTDYMSCAPHSAAINVTGSNKGFRYSVAFNSTTVHSLPMTVN
VLSNAILRGLNGTQHIQTWTKPFDYQIPDATSYALVYIEAIILGMLAAGMPAYFAMDHTR
DREIKCRSTLRISGLVPSAYWCGQAAVDIPFYYLILTTMTSILFSFHTANLLTSSNVTAV
ILCLIGFGPAMILFTYVVSFMFTRVQSNRDFFSVVSMMVCVVSASIVQLSFVNDNPGLTR
ILHNTLCFLNPLYPLMGCLNSITKATFLPSLYEEDFLWKNLLIAVLSPYLQCILLLFMLR
WLEIRYGGRTMKNDQFCRISSKTKAKVERNPEEGINEDEDVQMEKARVKEALTCQCCEEV
CVCGHYEKPVVVVSNLRKQYKCPREGISLKKRRTVATKNISFCVRKGEVLGLLGPNGAGK
STIMHMLSGDTVPTAGQVLMGDYSTEFRPVDNPLEHIGYCPQVSPLWPRITLEEHLEIYA
AIKGLQGQDVPGIITRVVNALELKGHLHKQAKNLSAGIKRKLCFALSMLGNPQIVLLDEP
STGMDPKSKQRMWRAIRAAFKNRQRGAILTTHYMEEAEAVCDRVAIMVSGQLRCIGSIQH
LKGKYGRGYSLEVKLREELTGLQQVALLHKEIRRIFPHAARQESFATLMVYKIPMEDVKS
LAKSFSQLESAKQAFNFEEYNFSQSTLEQVFMEFAKEQENEEEEVGSLSTTFQWQRLRQD
GPVPVNHTDSIVHQL
NT seq
5088 nt
NT seq
+upstream
nt +downstream
nt
atgtatttcatacctattgcgcccagctgtggagaacgtcctcattcatgccccagacag
ttgaagcatgctggtaataacgttagtatgcagcccaacataatcagaagagatgccgga
gtctggcatcaaacgaaaagcctgctttacaagaatctactcatcaaatggaggactaaa
caacagagtctgcaggagttgatcctgccgctgctgctgctgtgcctgctgattctgatc
agcaccctgaacccacatgtctattacggaggcatcagtaccatggagctggagagggag
gactaccacttactcaagggcctgggatacacccccattaacaatgccaccaatcacatc
atggaggaggtggcccaggaaatgcacttgcaggatcgcctggagatgttctctagtgaa
gaggatttggagaatgccagtctttatgagccctcaggctacgttggggtggtcttcatg
ggcagcacacccacctcttacaggttgcgcttcccttacaaccatctgcccctgcccagc
gactacactgaatctattgccaactgttttgccagctcagtgaactgcagagcagctaat
tactggtactctggcttcatccgcctccagactctcattgacgccgccatcatacagatg
cagaccaagcggtcagtgtggagtgagatggaccacctgcgtgtggtgatgatgggccag
ccagggtcagtggaggtccaaaagttcccccacgctctcatctccatctacctggtgctg
gctttcacacccttcatcaccttcctcatcgtcaacgtggcagcagagaaggaacacaga
ctcaaagacaccatgaccatgatgggcctctacgactctgccttctggctgtcgtggggc
ctgctgtatgcagctctggtcaccaccatgtccatcctcatgtccatcatcgctacctat
acagccctcttccccaacagtgacttcatcgtcatcttcctcctcatcttcctctacggc
atctcctctatcttcttctccttcatgctgacccctctgtttaagaagcctaagtttgcc
agtacggtgggctcaatgctgactgtggttttcggctgcctgtccctgttcactgtcctg
atgaaggacttcccccagccgctggtctgggttctttgtctgctgtcccccagcgcattc
tccatcggcattgcccaggtggtgtacctggaggctcagggggacggagctgtgtttgct
accctggccaacggcccccatcccctctacgccccccttctcatgctcgtcctggactgt
atactctacctgctgctggctgtctacctggaccaggttctaccaggtgagtttggcatg
cggcgctccctggtatacttcatgaagccatcctattggtccaagcgcagtaaacgctac
gtcgaggtgagctctgtgtacgagacagaggtgaacggggccccaggagtggatgagtct
gtcgagcccgtctctccggaattcagggggaaagaggccatccgcattaacaacatccgc
aaggtgtacaaagagaaggacagcatcgtggaagctctgaggggcttgacctttgacatc
tatgaaggtcagatcacagccctcctgggccacagcggagcggggaagtccactctgatg
aacatcctgtgtgggatctgccctccaaccgacggccacgcctccatctatggctcccct
gtggcagagatcgctgagggggcagagatgaggcagctggtgggcatctgccctcagttc
aacatcatctttgacgtgctgactgtagaagagcacctgaggatattcgctgccattaaa
gggattctgccctctgacattgacaatgaggtgtccaaggtgctgaaggatctagacctg
gagaagatcatggacgcccaggctaagaacctgagtggaggccagaagaggaaattgtct
gtgggcatagccatcctgggagaccccaagatcctgctcctggatgaacctactgctggt
atggacccctgttccagacaccaggtgtggtctctgctgaagagtcgcagagcaggcaga
gtcacggtgctcagcacacattacatggacgaggcagacatactcgctgaccgcaaagct
gtgatctctcagggccaacttaagtgtgttggttcttccctatatctcaagaccaagtgt
ggagtaggataccacctcagaatgtctattggtgaacggtgtgaggtagatggtgtcaca
tcattggtcaagcaccacgtccccaaggctcagttgtcacggcaacaagaggctgaactg
acattcaccctccctttcgaaagcatggacaccttttcaggattgttctcagaactagac
tgcaggccagacctgggcatcagcaactacggggtgtccatgacaacgctggaggacgtg
tttcttcgtctggaggctgaggctgaggtggaccaggctgactacagtgtgttcaaccag
gagcaggttgaggatgagggtgatgcatcctctctggacgacactgaccaaagactactg
accttctctgacagcaagccagaggcggtccagggccatgctctgtggagacagcagttc
agcaccgtggcctggctacacatgctcaacatgcagagagagaggaaggcctttgtctac
actctggcattgttcctggtcttcctagctgctgtgctagtattgtctctggctacgggg
aacatccagatccacgctccagaacggcagtttgtccccatctacctgctgagaccgaac
caggccccccggaaatacacaaccagtctactggtccagaactcatcaggctcggatatc
tccgacttcattcgtaacctggaatctcaggacatcaaggtggagatgatgaagaacaca
gactacatgtcctgtgctcctcacagcgcagccatcaatgtcaccggatccaacaagggt
ttcagatacagtgtagcgttcaacagtactaccgtccactctttgcccatgacagtcaac
gtcctcagtaacgccatcctacgaggtctcaacggcacacaacacatccaaacctggacc
aagcccttcgactatcaaattcccgacgccacgtcatatgctctggtctacattgaggct
atcatactggggatgctagctgcaggcatgcctgcctacttcgccatggaccacacccga
gacagagagataaagtgccgttcaacgctgcgtatctctggcctggtcccgtctgcgtac
tggtgtggtcaggctgcagtggacatccccttctactacctcatactgaccaccatgacc
agcatcctcttctccttccatactgccaacctgcttacctctagcaacgtcaccgcagtg
atcctgtgtctgataggttttggtccagctatgatcctgttcacctacgtggtgtctttc
atgttcacacgcgtccagagtaacagagacttcttctctgtggtctccatgatggtgtgt
gtggtgtctgcctccatcgtccagctgtcatttgtgaacgacaacccggggctgacgagg
atcctccacaatacactatgtttcttaaaccctctctaccctttaatgggctgccttaac
tctatcaccaaggccaccttcctgccctccctctatgaagaggacttcctctggaagaac
ctgctcattgctgtcctatctccctatctgcagtgcatcctgctgctgttcatgctgcgc
tggttggagatccgctacggagggaggaccatgaagaatgaccagttctgcaggatctct
tccaagactaaggctaaagtggagcgtaacccagaggaggggatcaatgaggatgaagat
gttcagatggaaaaggctcgggtgaaggaggccctcacctgccagtgctgtgaggaggtg
tgtgtgtgtggccattacgagaaaccagtagtggtggtgagtaacttgaggaagcagtat
aaatgtccaagggaaggaatctctctcaagaagaggaggacggtagccaccaagaacatc
tctttctgtgtacgcaaaggtgaggtgcttggactgctggggcccaacggagcagggaaa
agcaccatcatgcatatgttgtctggagacacagtcccaaccgctggacaggtcctgatg
ggggattacagtacagagttccgtccagtagacaaccccctggagcatataggctactgt
ccccaggtcagccctttgtggccccgcatcaccctggaggaacacctggagatctacgct
gccatcaagggcctccagggtcaggatgtccctggcatcatcacacgtgtggtgaatgct
ctggagctgaagggccacctccacaagcaggcaaaaaacctctcagctgggatcaagagg
aagttgtgctttgctctcagcatgttggggaaccctcagatagttctgctggacgagcct
tctacagggatggaccccaagtccaaacaacgcatgtggagggctatccgggcagcgttt
aagaaccgccagcgtggggccattctgaccactcactacatggaggaggctgaggctgtg
tgtgaccgcgtggccatcatggtgtcagggcagctcaggtgtattgggtctatccagcac
ctgaaggggaagtatgggcgtggctacagcctggaagtgaagctgagagaggagctgact
gggctccaacaagtggcactgctccacaaggagatccgtcgaatcttccctcacgctgca
agacaggagagctttgccaccctgatggtttacaagatccccatggaggatgtcaagtca
ctggccaagtccttctctcagctagagagtgctaagcaagccttcaactttgaagagtac
aacttttcacaatcaaccttagagcaggtcttcatggagtttgctaaggagcaggagaac
gaggaggaagaggtgggttccctcagcaccacgttccagtggcagcggctccgccaggac
ggccctgtgcctgtcaaccacacagacagcattgtgcaccagctctga
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integrated database retrieval system
