Salvelinus fontinalis (brook trout): 129819786
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Entry
129819786 CDS
T11136
Name
(RefSeq) semaphorin-6D-like isoform X1
KO
K06842
semaphorin 6
Organism
sfon Salvelinus fontinalis (brook trout)
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Gene cluster
GFIT
Motif
Pfam:
Sema
PSI
Motif
Other DBs
NCBI-GeneID:
129819786
NCBI-ProteinID:
XP_055732353
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Position
22:complement(10829201..10932665)
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AA seq
1034 aa
AA seq
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MVPPKWMRRRLLLAALTLTSCLLFAMATPFPKDLEPINVVGWEHSYLYPGFQGLVSDNDT
ARLGLDFQRMLRINHILYIAARDHVFAVNLTTAGDDFVPQLKLTWRSKDVAKCTVRGRNS
DECYNYVKVLVPRNDETLFACGTNAFNPTCRNYKMTTLEQVGEEVLGQARCPFESGQSNL
GLFAGGDFYSATMTDFLASDAVIYRSLGDDSPVLRTVKYDSKWLREPHFHHAIEYGNYVY
FFLSEIAVEYTTLGKVVFSRVARVCKNDNGGSPRVLERYWTSFLKARLNCSVPGDSFFYF
DVLQSLTNVLQINQRPAVVGVFTTQANSIPGSAVCAFYMDDIEKAFNGKFKEQKTSDSAW
TPVPEEQVPKPRPGSCAGDGPASAYKSSINFPDDTLTFIKSYPLMDEAVPSVNDRPCFTR
TTSRYKLTQIAVDTSAGPSKDRTVVFLGSEDGRVLKVLSSTHPNASFGSQLLEDIDVYNP
SKCNVQGQDDRRILGMELDKEHHALFVAFTSCVIRVPLSRCTEHGACKKSCLSSRDPYCI
WLRTGSCANMAPGFKAGFDQDIEGDHSLYPDNCHADVLATTRNQNSAADSAYGVRRLPDM
EKSSPSVHYTLLIACVLVAFFLGAILSGFLVSCYCSHNARRARRLGKDPEASIHPALSLR
SLAKLNGLLDGQPKEEKLDVSTPKMYSSFIPSGKEHTPERHGMSLGDPDLNLSQGENLSG
LPTPDSTPELPIKNMKAFRNQWERNQNCNNAKESKAPPGTGFSLGSSRSVTQQVFPFSHS
LTNGQALGHLPEERKIPNDERAQGASASHSCCPQTVVDVAALDELLKHIYEVSASGSRSI
TVLTSPCAPLPGSSSSSHNHSSFRSQPQIPETESATYYSSSTLPRDSLTRRLDVPPDAVA
ASSAGATPLQQQSIPERSAVTRHHSQRHLMIKMGNGGAVPRQHNFRQGGGGPPPHQLLTR
MNSSGGGGGGVGCEAHQPLIPSACLTRQHSYSEPPHLHRAAIVRRTASLKPQVPPKPLFL
PATSPVNEQGKYNY
NT seq
3105 nt
NT seq
+upstream
nt +downstream
nt
atggtccctccgaaatggatgaggaggcgtctcctgctggcggccctcacactcacttcc
tgtctactgttcgccatggccacgcccttccccaaggacctggagccaatcaacgttgtc
ggatgggagcactcctacctatacccagggttccaggggctggtgtcggacaacgacaca
gccagactaggcctggacttccagaggatgctgaggatcaatcacatactctacatcgct
gccagggaccatgtctttgcagtaaacctgaccacagctggtgacgacttcgtcccccag
ctgaagctcacatggaggtccaaggatgtggccaagtgtaccgtgaggggtagaaacagt
gatgagtgctacaactatgtcaaagtgctggtaccgcggaacgatgagaccctgtttgct
tgcggcaccaatgccttcaaccctacctgccgcaactacaagatgaccaccctggagcag
gttggcgaagaggtgttgggtcaggcacgctgtcccttcgagtcgggccaatccaacctc
ggcctctttgctggtggtgatttctactctgccaccatgaccgacttcctggccagcgac
gcagtcatctaccgtagtcttggcgacgacagccccgtcctgcggaccgtcaagtacgac
tccaagtggctccgagagccccatttccaccatgcgatcgagtatgggaattatgtctac
ttcttcctcagtgagattgcagtggagtacaccaccctgggcaaggtggtgttctctcgt
gtggcgcgggtgtgtaagaacgacaacggcggctctcctcgggtgctggagcgctactgg
acctccttcctgaaggcgcggctcaactgctcggtgcccggcgactccttcttctacttc
gatgtgctgcagtcactcaccaacgtgctgcagatcaaccagcgccccgcagtggtggga
gtgttcactacgcaagctaacagtatccctggctcggcagtgtgtgccttctacatggac
gacatagagaaggccttcaatgggaagtttaaggagcagaagaccagtgactcagcctgg
accccagtaccggaggaacaggtgcctaagcccaggcctggttcctgtgccggtgatggc
ccggcctcggcctacaagtcatccatcaactttcccgacgacacgctgaccttcatcaag
tcttacccgctgatggacgaggcggtcccctccgtcaacgaccggccctgcttcacccgc
accaccagcaggtacaagctgactcagattgcggtggacacctctgccgggccgtctaag
gaccgcactgtggtcttcctgggctcggaggatggcagggtcctgaaggtgttgtccagc
actcatcctaacgcctcctttggctcccaactcttggaggacattgatgtctataacccc
tctaagtgtaacgttcaggggcaggatgacaggaggattctgggaatggagctggataag
gagcatcatgccttgttcgtggccttcaccagctgtgtcatcagagtaccactcagccgc
tgcacggagcacggcgcctgtaaaaagagttgtctgtcgtcccgcgacccgtactgcatc
tggctccggactgggagctgtgccaacatggcgccagggttcaaggctggctttgaccag
gacatcgagggagaccactcactgtaccctgacaactgccacgcagatgtgctggcgacc
acacgaaaccagaactctgcggcagactcggcctacggtgtccgaaggctccctgacatg
gagaagtccagccccagcgtccactataccctcctgatcgcctgcgttctggtggccttc
ttcctcggtgccatcctctctggcttcctggtgtcatgctactgcagtcacaacgcccgc
cgtgcccgccggcttggcaaggaccctgaagcgtccatccaccccgccctctcgttgcgc
agcctggccaagctaaacggcctgctggatggccagcccaaagaggagaagctggatgtg
tccacacccaagatgtacagctccttcattcccagcgggaaggagcacactccagagagg
cacgggatgtccctgggagacccggaccttaacctctcccaaggggagaacctctcgggc
ctgcccaccccggactccaccccggagctgcccatcaagaacatgaaggccttccggaac
cagtgggagaggaaccagaactgcaacaacgccaaggagtccaaggcaccccccggcact
ggcttcagcctgggttcgtcaaggtccgtcacccagcaggtgttccccttctctcacagc
ctgaccaacggccaagccctggggcacctgcctgaggagaggaagatccccaacgacgag
cgtgcgcagggggcttcggcctcccactcctgctgcccgcagacggtggtggatgtggcg
gccctggacgagctcctcaagcacatctacgaggtcagcgcctcgggcagccgcagcatc
actgtgctgacctcaccgtgtgcccccctaccgggtagctccagttccagccataaccac
agcagcttcagatcccagccccagatccctgagacggagtcagccacgtactacagctcc
tccaccctgcccagggacagtctgacccgccgcctggacgtgcccccggacgccgtcgcc
gcctcctcggctggcgccaccccactgcagcagcagtccatccccgagcgaagcgcagtg
actcgccaccactcccagaggcacttaatgatcaagatgggcaatggaggggccgtcccg
cgacaacacaacttcagacagggagggggtgggccaccgccccaccaactgctcacccgg
atgaactcgtcaggtggtggcgggggaggggtcggctgtgaggcccaccagccgctcatc
cccagtgcctgcctgacacggcagcacagctacagcgaaccgccccacctccaccgcgcc
gccatcgtacgccgcacggcctccctcaagccccaagtgccccccaagcccctcttcctg
cccgccacttcgcccgtaaatgagcaaggcaagtacaactactga
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