Salvelinus fontinalis (brook trout): 129820022
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Entry
129820022 CDS
T11136
Name
(RefSeq) AT-rich interactive domain-containing protein 1A-like isoform X1
KO
K11653
AT-rich interactive domain-containing protein 1
Organism
sfon Salvelinus fontinalis (brook trout)
Pathway
sfon03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
129820022
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sfon03000
]
129820022
03021 Transcription machinery [BR:
sfon03021
]
129820022
03036 Chromosome and associated proteins [BR:
sfon03036
]
129820022
Transcription factors [BR:
sfon03000
]
Eukaryotic type
Helix-turn-helix
ARID
129820022
Transcription machinery [BR:
sfon03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
129820022
Chromosome and associated proteins [BR:
sfon03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
129820022
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
129820022
NCBI-ProteinID:
XP_055732791
LinkDB
All DBs
Position
22:21348812..21461007
Genome browser
AA seq
2288 aa
AA seq
DB search
MAAQVASVATLNTSPPSELKKPDRDPLEESVPGEKQHENKEPGSDNGSPGQKDLQDGADA
GNVGGGEPDMKNGNSSRVNNNNQNDTGGPEGNNHPGMGHHHQGSFPPPPYEYNQHYSRGP
FHQHGGQQSPGMAAAAGPAVQSGNMMDPYPPNSHDHGFSNQFNNYSPFPNRTSYQGQGYA
MNSPRNNQPPAAGGQPVKQQPAGGTTAMAASYNNQRYNMGNTQPTSTPTLNQLLTSPSST
RSYQNYPQGDYSNQEGASKGAADMASSQYGGGHPGWQQRSHQPPMSPSNTGQPLNRNQPP
MDHVGKMRGQGYGGANPYSQQQQQGQGQGPPPPGAQQGASYPGQGYGPPGPQRYPMGMQG
RTPTGMAGMQYGQQIAGFGQQGPGGYGQQSQGYYSPHGPPPHAGQQQAPYPQQGQPGPQG
QGPPQGGPPQAQPPYNQGPPQPTQQPGPQQGQPGPQSQGPQPSYPQQQGPPGTGQGQQPP
QQQPSSQQQGPPQQQQGPPQQQQDRAAPPQAQPPPGHQQPPVHQSPPGHQSSPGSQGHHP
SPGHGGPPQQQGQSQQGQPSPYSQTPPLQQQQQSPFQRFPPPPQELSQDSFSSQSSAPPS
NQPMTSNKSGAEDSMQGRPSSLPDLSGSIDDLPTGTEGALSPGVSTSGVSSSQGEQSNPA
QSPFSPHTSPHLPDIRGPSPSPVGSPASVTPSRSGPLSPAAVPGNQMPPRPPSVHSDGIL
HTSMGQSAMGQSAMGQDRVYLRNPQMPPYGSPQQPGSALSPRQSSGGQMHPGMGPYPQNN
SMGNYGPQGGQYGPQGYPRQPGYSGMPNANYPGGPGGMNPMPGQAGGAPYAGMPPGRMGP
GQMGARPYGPGMGPNMGPGIPPQVTSGMCPPPGMNRKGPGGPPDAASAMHHGANSIHNRP
PGYPPNMPQGMMGAGPPYGPGPGAINSMQGMMNQGGPYGGGPMGGNMANNTPGMAPSPEF
GIDVKLSPAQKMNNKVDGTPKPETKKVKKKSNSSTTTNEKITRLYELGPELERRTWVDRY
LAFAEDKAMGMTNLPAVGRKPLDLFRLYVSVKEIGGLTQVNKNKKWRELSTNLNVGTSSS
AASSLKKQYIQCLYAFECKIERGEDPPPDLFTDAKKTTQPKIQPPSPAGSGSLQGPQTPQ
STSSSMAEGGDLKPPTPASTPHSQMPPMPVRLQDPFADGGDPAFARRNSMTPNSYQPGIG
GPEMMGHMGPYESNKDPFGGMRKAGEQFMTPGPGPNSGMEGQFNRGPPNMQMGPRQQYPY
GPGYDRRQEPGMGPDGSMGPGAPQPNLMPSGADSGMYSPSRPPPQQRHDSYGNQYPGQGA
PPGGPYPNQQPGMFPQQQPNYKRPPVDGGYGPPAKRHEGDGMYNVPFSGQQQPGPQPSGG
PQGQQDMYNQYNAGYPGSDRRPPGPQGQFPFPFGRDRGPSSGGPNSQSPMPPQMMGSPMQ
AASDGPQGPMWQGRNEMGYPNYPNRQGPPGPGQGPPQGYHGMNRSEEMMSGADQRMNHEG
QWPGHPSQRQSPYGLGGSGPPMSRPLQSNYQSSQNHISQVSSSAPMPRPMESRTSPSKSP
YVHSGIKMQKAGPPVPASHIGQAPVQPPLIRRDIAFPPGSVEASQPILKPRVRLTMKDIG
TPEAWRVMMSLKSGLLAESTWALDTINILLYDDNSISTFNLCQLPGFLELVVEYFRRCLI
EIFCILKEYEVGDPGQRTLIDPHAADEDCSDEELPEQEDMEEEEDEEEEDERKSNADTTS
SQQVQVKKEEEEEKSTTEKSTAEEEKEREGGESTSTSSTPQNFSFLQEKPKQASKFDKLP
IKMVRKKDPFPGGRSSKLGRRQSFDSGLIHWSIGGGDTTEHIQTHFESRSDLHKQRKRVL
PSATESRKVAMPATVSEEPEKTTKPGMEEQTTSPAEKTSTPTTPAPVTATIDDVLSARPG
SVTEEAVRGAAEEQKENRGKFLFSIRQAQQSRRNVTILEDEPHSKDETPLSTLSDWQDAL
ARRCVCVSNIVRSLSFIPGNDLEMSKHPGLLLLLGRLVLLHHRHPERKQAPVTYEKEEDE
GERLSCERDEWWWDCLEVLRENCLVTLANISGQLDLSIYPESICLPLLDGLLHWAVCPSA
EALDPFPMLGPHGALSPQRLVLETLSKLSIQDNNVDLILATPPFSRLEKLYGTLVRLIGE
RKVAVCREMSVVLLANLAQGDSMAARAIAVQKASVGNLLGFLEDSLAATQYQQSQSSMMH
LQGAHFEPTSVDMMRRAARALHAMAKVEENHSEFTLYESRLLDISVSPLMNSLVSHVICD
VLFLIGQS
NT seq
6867 nt
NT seq
+upstream
nt +downstream
nt
atggccgcgcaggtcgctagcgtcgccactctcaacactagcccgccatccgaacttaaa
aagccggatcgggacccactggaggagtcggtaccgggagagaaacaacatgaaaataag
gaacctggatctgacaacggatctccgggccagaaggatctgcaggacggggccgatgct
ggaaatgtaggaggaggggagcctgacatgaagaacgggaactcgtccagggtgaataat
aacaaccaaaatgatacggggggaccggaggggaataaccaccccgggatgggccatcac
caccagggctcattccctccacctccttacgagtacaaccagcactacagccggggccct
tttcatcaacatggcggacaacaaagccctggcatggcagctgcagcggggccggcagtg
cagtcaggcaacatgatggacccatacccgcccaactcacacgaccacggcttctccaac
caatttaacaactacagccccttcccgaaccggacttcttatcagggccaaggatacgcc
atgaattccccgcgtaataaccagcccccggcggctgggggtcagccagtcaagcaacag
ccagcaggcggaactacagccatggctgcctcgtacaataatcagaggtataacatggga
aacacacagcccacgtctaccccgacattaaatcagctcctaacgtctccaagctctacg
aggagctaccagaactatccacaaggagactatagtaaccaggaaggggctagcaaggga
gcagcagatatggccagcagtcaatatggtgggggtcatccgggttggcaacaaaggagc
caccagccgcctatgagcccatcgaacacgggacaacctctgaacagaaaccagccccct
atggaccatgtagggaagatgcggggccaggggtacggtggagccaacccctactcccag
cagcagcagcaaggccaggggcagggccctcctcctccaggggcccaacagggtgcctcc
tacccaggccagggctatggacccccggggcctcaaaggtatcctatgggcatgcaggga
cgcacccccaccggcatggctggcatgcaatacggacaacagattgccggctttgggcag
cagggtccagggggctacggtcagcagagccagggctactacagcccgcacggcccccca
ccacacgctggccagcagcaggccccctacccccagcagggtcagcccgggccccagggc
caagggcctccgcaagggggtccaccccaggcccagccaccctacaaccagggaccaccc
cagcccacgcagcagccagggccccagcagggccagcccgggccccagagtcagggcccc
cagcccagctaccctcagcagcaaggacccccaggcacagggcaggggcagcagcctcca
cagcagcaaccctcctcgcagcaacaaggacccccgcagcagcagcaaggacccccgcag
cagcagcaagatagggcggcccctccacaggcccagccacccccaggccatcaacaaccc
ccagtccaccagtcaccccccggccaccaatcctccccgggctcccagggccaccaccca
tctccaggtcacggtggacccccacagcagcagggtcagtctcagcagggccagccctca
ccctactcccagaccccacccctgcagcagcagcagcagtcgcccttccagcgatttcca
cctccgccacaggagctctcccaggactcgttcagctcccagtccagtgctcccccctcc
aaccagcctatgacttccaacaagagtggcgcagaggacagcatgcagggacggccttct
agtttaccagacctctctggttccatagatgacttgccgacgggtacggagggggctctg
agtccgggcgtcagcacgtcgggggtgtccagtagccagggggaacagagtaaccccgcc
cagtcacccttctcaccccacacctcgccccacttgcctgacatccgcgggccctccccc
tcccccgtgggctcccctgccagcgtcaccccctcgcgctccggacccctgtcacctgct
gccgtgccaggtaaccagatgcctccccggccgcccagcgtccattcagacggcattctc
cacacatccatgggccagtcagccatgggccagtcagccatgggccaggacagggtgtac
ctgcgtaacccccagatgcctccctacgggtcgccacagcaacctggctccgccttatcc
cctcgccagtcatcgggaggccagatgcatcctgggatggggccgtaccctcagaacaac
tccatggggaactacggccctcagggtggacagtacggaccacaaggttaccccagacag
cccggctacagtggcatgcccaacgccaactaccctggtggtccggggggcatgaaccct
atgccaggccaggctggtggggcgccatatgcaggcatgccccctggcaggatgggtccg
ggtcagatgggtgcccgcccctacggccccgggatgggccccaacatgggccccggcata
cctccacaggtgacctctgggatgtgcccccctccaggcatgaacaggaagggccccggg
ggccctccggatgcagcctctgccatgcaccacggagccaactccatacacaacaggcct
ccaggttacccccccaatatgccccaggggatgatgggagcagggcctccgtatggccct
gggccgggggccatcaacagcatgcaaggtatgatgaaccagggaggaccctacggagga
gggccgatgggagggaacatggccaacaacacacctggcatggctcctagccctgagttt
ggcatcgatgtcaaactgagcccagcacagaagatgaacaacaaggtggacggcacgccc
aaacctgaaaccaagaaggtaaagaagaagtcaaactcttcgacgacgaccaatgagaag
ataactcgtctgtatgagctgggtccggagctggagaggaggacgtgggtagaccggtac
ctggcgttcgctgaggataaggccatgggcatgaccaaccttcccgccgtgggacgaaaa
cctctagacctcttcagactttacgtctcggtcaaagagatcggaggcctcacacaggtg
aacaagaataagaagtggagggagttgtccaccaacctgaacgtgggcacgtccagcagc
gccgccagctccctgaagaagcagtacatccagtgtctgtacgccttcgagtgcaagatc
gaacgtggcgaggacccgcccccggatctcttcactgacgccaaaaagaccacccagccc
aagatccagccccccagcccagctgggtctggatctctgcagggcccccagaccccccag
tccaccagtagttccatggcggaggggggagacttgaagccccccaccccagcctccacc
cctcacagccagatgccccctatgcccgtcaggctgcaggatccgtttgcagacgggggt
gacccagcgtttgccagacggaactccatgacccccaacagctaccagcctgggataggt
ggtccggagatgatgggtcacatggggccctacgaatccaacaaggacccctttggtggc
atgaggaaagctggagagcaattcatgactccagggccgggtcctaacagtggtatggag
gggcagttcaacagaggcccccccaacatgcagatgggtccgagacaacagtacccctac
ggacctggatatgacaggagacaggagccagggatgggtcctgacggcagtatgggtcct
ggggccccccagcccaacctgatgccttcaggggccgactcggggatgtactcccctagc
cgacccccaccgcagcaacgtcatgattcctatggtaatcaatatcctggtcaaggagcg
ccacctggtggaccctaccccaatcagcagccaggaatgtttccacagcaacaacccaac
tacaagcgtcctccagtggatgggggctacggtcccccagcgaagcgtcatgagggggat
gggatgtacaatgtccccttcagcggtcagcagcagccagggccccagccctccgggggc
ccccagggccaacaagacatgtacaatcagtacaacgcaggctaccccggctctgaccgc
cgaccacctggcccccagggccagttccctttccccttcggccgagaccgggggccctcc
agcgggggccccaactcccagtcccccatgcctccccaaatgatgggcagccctatgcag
gcagcctctgacggcccccagggccccatgtggcagggacgcaacgagatgggctacccc
aactaccccaaccgccaggggcctccaggacctggccagggccccccccagggctaccac
ggcatgaaccgctctgaggagatgatgtcaggggctgaccagcggatgaaccatgagggc
cagtggcctggacaccccagccagagacagtccccctacgggctggggggctcaggcccc
cccatgtccagacccctgcaatccaactatcagagctcccagaaccatatttcccaggtg
tccagctccgcccccatgccccgccccatggagagccggacgtccccctccaagtcgccc
tacgtgcactcaggcatcaagatgcagaaggcggggccccccgtgcccgcgtcccacata
ggccaggcccccgtgcagccccccctaatcaggcgggacatagccttccccccagggtcg
gtggaggcctcccaacccatcctcaaacccagagtacgactcaccatgaaagacatcggc
accccagaggcctggagagtgatgatgtcactgaagtcaggcttactagcagagagcacg
tgggccttggacaccattaatatcctactctacgatgacaacagcatttctactttcaac
ctctgccagctgcctgggttcctggagctggtagtggagtatttcagacgctgcctcatc
gagatcttctgcattctaaaggagtatgaggtgggagaccctggccagcggacgctcatc
gacccgcatgctgccgacgaagactgttctgacgaagagcttcccgagcaggaggacatg
gaggaggaagaggacgaagaggaggaggacgagaggaagagcaacgcagacaccacctcg
tcgcagcaggtccaggtgaaaaaggaggaggaagaggagaaatccacgactgagaagtcg
acagcggaggaggagaaggagagggaaggaggggagtctacttccacctcctcgaccccc
cagaacttcagcttcctacaggagaaacccaaacaagccagtaagttcgacaagctgccc
atcaagatggtgcgtaagaaagatcccttccctgggggccgttccagtaagctaggccgg
cggcagagctttgacagcggactaatccactggagcatcggcgggggggacaccacggaa
cacatccagactcacttcgagagccggtccgacctccataagcagcggaagcgggtgctg
ccatcagccaccgagagtagaaaggtcgccatgcctgcgacggtgtcagaggaaccagag
aagaccactaagcctggcatggaagagcagaccacctcccctgcagagaagacctccacc
ccaaccacgcccgccccggtcaccgccaccatcgacgacgtcctgtcggcccggccgggc
tctgtgacggaggaggcggtgcgaggagcagccgaggagcagaaggagaacagggggaag
ttcctgttctccatccgtcaggcgcagcagagccgacgcaacgtcaccatcctggaggac
gagcctcacagcaaggacgagaccccgctgagcacgctgtcggactggcaggatgccctg
gcccgccgctgtgtctgcgtctccaacatcgtccgctcgctgtctttcatccccggcaac
gacctggagatgtccaaacacccggggctgctgctgctgctgggccgtctggttctgctc
caccaccgtcacccagagaggaaacaggcccccgtcacctacgagaaggaggaggacgag
ggcgagaggttgagctgtgagagggacgagtggtggtgggactgtctggaggtcctcagg
gagaactgcctggtcactctggctaacatctccggccagttggacttgtccatctaccca
gagagcatctgtttgcccctgctggacggcctgcttcattgggctgtttgtccttcggcc
gaggctctggaccctttccccatgctggggccccatggggccctatccccccagagactg
gtgctggagaccctcagcaagctgagcatccaggacaacaacgtggaccttatcctggcc
acgccgccgttcagccggctggagaagctgtacgggacgctggtgcgcctgattggggag
aggaaggtggctgtctgcagggagatgtctgtggtcttactggccaacctggcccaggga
gacagcatggcggccagggccatcgccgtgcagaaggccagcgtaggtaacctcctgggc
ttcctggaggacagtctagcagccacgcagtaccagcagagccagagttccatgatgcac
ctacagggggcgcactttgagcccactagcgtggacatgatgcggcgagcggcccgcgcc
ctgcatgccatggctaaggtggaggagaaccactcagagttcaccctgtatgagtcccgc
ctactggacatctctgtctcaccactcatgaactctctggtgtcccatgtgatctgtgac
gtactctttctgattggccagtcatga
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integrated database retrieval system
