Salvelinus fontinalis (brook trout): 129820032
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Entry
129820032 CDS
T11136
Name
(RefSeq) POU domain, class 2, transcription factor 3L-like
KO
K09364
POU domain transcription factor, class 2
Organism
sfon Salvelinus fontinalis (brook trout)
Pathway
sfon05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
129820032
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sfon03000
]
129820032
03021 Transcription machinery [BR:
sfon03021
]
129820032
Transcription factors [BR:
sfon03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain POU
129820032
Transcription machinery [BR:
sfon03021
]
Eukaryotic type
RNA polymerase III system
Other transcription-related factors
Octamer transcription factors
129820032
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pou
Homeodomain
Motif
Other DBs
NCBI-GeneID:
129820032
NCBI-ProteinID:
XP_055732815
LinkDB
All DBs
Position
2:47632490..47650581
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AA seq
435 aa
AA seq
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MSTDGVEHSEAQHEQAGKDRTASCTSLSHDVIQSATSCVGLFLETKDIEQRQIKTEDLND
SLHAVSSRKTCLPTQGSPIPGVQAGQLSVELPSLHTMPQLVLMSGSHHLSPPSSFLLSQT
QHTGHQALLQQNLHGFPTQSQSGLLQHQPGLALTPQAMSRSGLTSSSMEGHVDMSHLQVP
KHIGASQQDDPSDLEELEQFAKAFKQRRIKLGFTQGDVGLDMGKLYGNDFSQTTISRFEA
LNLSFKNMCKLKPLLEKWLSDAENSPSDSMANVASLPPLMEGYGRKRKKRTSIETNIKFT
LEKRFLVNPKPNSEEITLISEQLSMEKEVVRVWFCNRRQKEKRIYCPVSTSPMKSHNFNN
RMSSCNTLFQASTSRSYSPLASGGVSSSPSPNSPSHGPSLGTFSSGSTALTSQVNQSFSS
PGSWYRTWNPMPYHH
NT seq
1308 nt
NT seq
+upstream
nt +downstream
nt
atgagcacagatggtgtggaacactcagaggctcaacatgaacaagcaggtaaggatagg
accgccagttgcacatccctgagccatgatgttatccagagcgctacttcctgtgtaggc
ctattcttagaaacaaaagacattgaacaaagacaaatcaaaacagaggacctcaacgac
tctctccatgcagtctcatcacgcaaaacatgtctcccgacacaaggatccccaatacct
ggagtccaggcaggccagctgtcagtggagctcccctccctccacacgatgccgcagctg
gtgcttatgtcaggctctcaccacctctcacccccctcctccttcctcctctcacagaca
caacacacggggcatcaagcacttctgcagcagaacctacacggctttcccacccagagc
cagtcaggtctcctccagcaccagcctgggttagcactaacacctcaggccatgagtcgg
tcgggcctgacgtcgtcgtccatggaaggacacgtggacatgtcccacctgcaggtcccc
aaacacatcggggcctcccagcaggacgatcccagcgacctagaggagctggaacagttt
gccaaggccttcaaacagagacgcatcaaactgggcttcacccagggtgatgtaggcctg
gatatggggaaactgtatgggaatgacttcagtcagactaccatctcccgcttcgaggca
ctcaacctgagcttcaaaaatatgtgcaagttgaagccgctactggagaagtggctgagc
gacgcagagaattctccctctgactctatggccaacgtagcctctctgccccccctgatg
gaaggctatggaaggaaaaggaaaaagagaacaagcattgaaaccaacatcaagttcacc
ctggagaaacgctttcttgtcaaccccaagcctaactcagaggagatcacgctgatctca
gagcagctgtctatggagaaggaggtggtgcgggtgtggttctgtaaccgtagacagaag
gaaaagaggatctactgccctgtgtccacctcacccatgaaatcacataacttcaacaac
agaatgtcttcatgtaacaccctgtttcaggcctccacgtccagatcatacagccctctt
gcttcaggaggagtgtcatcgagtccttctcctaatagtcctagtcatggaccttcgctc
ggcaccttctcgtctggctccactgctttgacctcccaggtcaaccaatccttcagctca
ccagggtcgtggtatcgcacatggaaccctatgccctatcaccactga
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