Salvelinus fontinalis (brook trout): 129820038
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Entry
129820038 CDS
T11136
Name
(RefSeq) rho guanine nucleotide exchange factor 12-like
KO
K07532
Rho guanine nucleotide exchange factor 12
Organism
sfon Salvelinus fontinalis (brook trout)
Pathway
sfon04270
Vascular smooth muscle contraction
sfon04625
C-type lectin receptor signaling pathway
sfon04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
129820038
09150 Organismal Systems
09151 Immune system
04625 C-type lectin receptor signaling pathway
129820038
09153 Circulatory system
04270 Vascular smooth muscle contraction
129820038
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sfon04131
]
129820038
Membrane trafficking [BR:
sfon04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
129820038
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
129820038
NCBI-ProteinID:
XP_055732830
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Position
2:47663901..47788604
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AA seq
1497 aa
AA seq
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MSETQSTLTDRVPKNATRTLSILSKDHPPDKKPKSDKNTVPPLHEFDPTGLVQRCVIIQK
DENGFGLTVSGDNPVFVQLVKEDGSAMRAGVQTGDRIIKVNGSLVTHSNHVEVVKLIKSG
SYVALTVLGRPPGLAQIPLSEGEGVDPGVLSSSLSSPHSPGTMGGTGERCSTSTSPQDHI
ISPLPLWEENNAVHSQNVDILQKMLSKEQQDVQAMKEEYSRNPTAKLLKDIQEAKKHIPL
LHGQLRKTTGTPQDGSLSPWNGEGGGVGAADGEQTPSSQVESGSNGTWTNNTVSPSPLPE
SPCHRETPCHCPKTTPRDSLNSCPSPDAEDTPDLNCNFQCSVGRPLSRLNPQIIGAEDDY
FDTEQEQINGQCCCFQSIELLKSRPAHLAAFLHHVVSQFDPAPLLCYLYADLYKQTNSKE
TRRIFTDFYTFFMDRAANLKVAVPESIASELDRRRPELIPEELHRQYTQLLQDTLLPDIQ
GNLEDFRQKRSMGLTLAEGELAKLDTERVRDRVALDRERSCAEHIISKIEDVLLTSQPTE
EEKCTTMQYVILTYMKHLGVKVKEPRSLEPKRVRINFLPKIKKSIKTEKEGEDKVKKPRF
PSILGPPRRPSRVDSTSIGKAIEMNKQRGPQKQLSQPILSIPDHLESSARGSQSRDLGSD
VATHPSALIASPPHSAPASQGSDPMGRDSDSGLTPSSALPRLSSDWLHPGDTQDRMAHPT
STHFDFSPCTLDQLQEEERESDGVQEGGTPKPARRMQGLGCADVPSEDDLGNEIECKQDS
PNWQTLVSRDVLAGLTPQEIKRQEVINELFYTERAHLRMLKVLDNVFYQKLTRDSILPPG
DIKHIFTNLEEIVQLHVSITEQVTVIRKKNETSVIDLIGDDLLAWFSDGEEEKIKRAVGT
FCSNQPFALELIKTRQKKDQRFTSFMQEAESNRLCRRLQLKDIIPVEMQRLTKYPLLLES
IAKYTEDAAEREKVKRAGECCRKILNYVNQTVKEAENKQRLEDYQRRLDLSSLKQSENPM
ISEFKSLDLTKRKMVHEGPLSWKVNKDKTIELYTLLLEDILVLLQKQDERLVLKCHSKNL
AGTADTKHIFSPIIKLNTVLVRSVATDNKSFFVLSMSDNGAQIYELMAQTVSEQRTWQCL
ITQRADTMKTKPHNIIPLPQTDAERDAVEVISTGIPKLSKDPDRLSTGSIQFAEKYVTSS
PGLQPTPTSINPFDSIKSDDKEEESPLLLDRREEEVEEADEEEVEAFLVGELADRLPLLQ
ERSCQGIAIDDQEPHDAFVMPPSRAEEALRTLAALRQVLLNHITSREEGSNKNNENRKEN
EQRKGLAHGSRLLRTTSLRGPEDSNSSTSDPRSAAASSPGSSENGTSERTEAGREEGAPG
SSELPSGDTGFFETSEDYGSYIVLGGSGESSTDDDGQASGKGGGGAQWGSDIDLKKLLSS
SSQTGDAGPNLSRQVMTHIRLLQANLQHLKEVETKYNELRQRRSETATDTEENKDES
NT seq
4494 nt
NT seq
+upstream
nt +downstream
nt
atgagcgagacacagtcaacactcactgacagggttcccaaaaacgcaaccaggaccctt
agcattctcagcaaggaccaccccccagacaagaaacccaaaagtgacaaaaacacagtc
ccacctctgcatgagtttgaccctacagggcttgtccagcgttgtgtgatcattcagaaa
gatgagaacggttttgggctgacggtgagcggagacaaccctgtatttgtgcagctggtc
aaagaggatggctctgccatgcgagcaggcgtccagacgggtgataggatcatcaaggtt
aacgggagcttagtaacacattcaaaccatgtcgaagtcgtaaagttaatcaaatcgggc
tcctatgtggctctcacagtgctggggaggcccccgggactggcccaaatccccctgtca
gagggcgagggtgtagacccaggggtcctgtcgtcgtccctctcctcaccccactctccg
ggaacaatggggggaacaggggagcgctgctccacctccaccagtccccaggaccacatc
atctccccgctgcccctctgggaggagaataacgctgtacacagccagaacgtggacatc
ttacagaagatgctgtccaaggagcagcaggacgtacaggctatgaaggaggagtacagc
aggaaccccacagccaaactactgaaggacatccaggaggccaagaaacacattcctctg
ctgcatggccagctcagaaagaccacaggcacacctcaggatggctccctctccccctgg
aacggtgagggggggggtgttggggcggccgatggagagcagaccccctcctcgcaggta
gagagcggcagcaacggaacctggaccaataacactgtgtctcccagtcccctccctgag
agtccgtgccatagagagaccccctgccattgcccaaagacaaccccccgagacagcctc
aactcctgcccctcgcctgacgccgaggacacgccggacttgaactgtaacttccagtgt
agtgtgggcaggcccttgtcccgtctcaacccccagatcatcggagcagaggacgactac
tttgacaccgagcaggaacagatcaatggtcagtgttgttgtttccagagtatagagctg
ctcaagtctcggcccgctcacctggccgccttcctccatcacgtggtctctcagtttgac
cctgcacctctgctgtgctacctttacgccgacctgtacaagcagaccaactccaaagag
accagacggatcttcacggatttctatactttctttatggaccgagcagcgaatctgaaa
gtagctgtgcctgagtctattgcctctgaactagatcggcggagacctgagctgatccca
gaggagctacacagacagtacacacagctgctacaggacacactgctaccagacatccag
gggaacctagaggacttcaggcagaagcgcagcatgggtctgaccttggcagagggggag
ctggctaaactggacacagagagggtgagagaccgcgtggcgctggatagagaacgctcc
tgtgccgaacatatcatctccaagatagaggacgtcttgctgacgtcacagcccacagaa
gaggagaagtgcactactatgcagtatgttatcctcacatatatgaaacacctgggagtt
aaagtgaaggaacctcgtagcctagagcccaaacgagtccgcatcaacttcctgcccaag
atcaagaagagtatcaaaactgagaaagagggggaggataaggtgaagaagcctcgtttt
cccagcatcctcggccctcctcgtcggcccagccgtgtggactccacttcaatcggcaag
gccatagagatgaacaagcagcggggcccccagaagcagctctcccagcccatcttaagc
atccccgatcacctagaatcctcggcccgtggcagccaatcaagggacctaggctcggat
gtggccacccacccctcggccctcatcgcatcacccccacacagtgccccagccagccag
ggctccgacccaatgggacgcgattctgactcgggtctcactccctcctccgccctgccc
agactgagctctgactggctccacccgggcgacacccaggacaggatggcccacccaacc
agcacccactttgacttcagcccctgcaccctggaccaattgcaggaggaggagcgtgag
agtgacggagttcaagagggaggcacacccaaaccagcccggaggatgcagggtttaggc
tgtgcagatgtgccgagtgaggacgacctggggaatgagatcgagtgcaagcaggactct
cccaactggcagacactagtcagccgagatgtcctggcgggcctgacaccacaggagatc
aagagacaggaagtcatcaacgagctgttctacacagagcgagcccacctgaggatgttg
aaggtgctggataacgtgttctaccagaaactaacccgagacagcatcctgcctcctgga
gacattaaacacatcttcactaacctagaggagattgtccagctacatgtgtcgataaca
gaacaggtgacagtcattcggaagaagaatgagacgtcagtgatagacctgataggagac
gatctactagcttggttcagtgatggggaggaggagaagatcaagcgggcggtgggcacc
ttctgcagtaaccagcccttcgccctggaactcatcaagacccggcagaagaaagaccag
cgcttcacctcctttatgcaggaggctgagagcaaccgtctgtgtcgcagactgcagctg
aaggatatcattccagtggagatgcagaggctgaccaagtatccactactgctggagagc
atagccaagtacacagaggatgcagcggagagggaaaaggtgaagagggccggggagtgc
tgcaggaagatcctcaactatgtcaaccagacggtgaaagaggcagagaacaaacagagg
ttagaggactaccaaagacgcctggacctgtcctcactcaaacagagtgagaacccaatg
atctcagagttcaagagcctggacctgaccaagaggaagatggtgcacgagggacctctc
tcctggaaggtcaacaaagacaagacaatcgagctgtacacgctgctcctggaggacatc
ctggtgctgctgcagaagcaggacgagcggttggtcctcaagtgccacagcaagaacctg
gcgggcaccgccgacaccaagcacatctttagccccatcatcaagctcaacactgtgctg
gtgcgctcggtggccaccgacaacaagtccttcttcgtgctgtctatgtccgacaacgga
gcccagatctacgagctaatggcccagaccgtgtccgagcaaagaacgtggcagtgtctg
ataacgcagagggcagacacgatgaagacaaaaccgcacaacatcatacctttacctcag
accgatgctgagcgagacgcagtggaggtgatcagcacagggatacccaaactgagcaaa
gacccagaccgcctttccacgggaagtatccagttcgcagaaaaatatgtcacttcctcg
cctggtctgcaacccacgcccacatcgatcaacccattcgacagcatcaaatcagacgac
aaggaagaagagtcgccgctactgctagacagaagagaagaggaggtggaggaggcagac
gaggaggaagttgaagcgtttctggttggagagctggcagacagactgcccttactccag
gagaggtcatgccaaggcattgccatcgacgaccaggagccccatgacgccttcgtcatg
cccccctccagagccgaggaggccctaagaaccttggcagccctgaggcaggtccttctc
aaccacataacaagcagagaggagggcagcaacaagaacaatgagaataggaaggagaac
gagcagaggaagggcttggcccatggctcccgcctgctgaggaccacttcactgaggggc
ccagaggacagcaacagcagtacatcggaccctaggagcgcagcagcatcctctcctggc
tcctcagagaacggcacctcggagaggaccgaggcggggagggaggagggggccccagga
tcctcggaactcccgtctggggacacaggcttcttcgagacatctgaggactacggcagt
tacattgtgctggggggctcgggggagagcagcacagacgacgacggtcaggcgagtggc
aagggtggaggcggggcccagtggggctcggacatcgacctgaagaagctgctctcctca
tcctcgcagacaggggatgctggccccaacctcagccgtcaggtcatgacccacatccgc
ctgctgcaggccaacctgcagcacttgaaggaagtggaaaccaagtataatgaactgcgc
caaaggcggagtgaaacagctactgacacagaggagaacaaagatgagagttag
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