Salvelinus fontinalis (brook trout): 129820063
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Entry
129820063 CDS
T11136
Name
(RefSeq) retinoic acid receptor beta-like isoform X1
KO
K08528
retinoic acid receptor beta
Organism
sfon Salvelinus fontinalis (brook trout)
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sfon03000
]
129820063
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
sfon03310
]
129820063
Transcription factors [BR:
sfon03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
129820063
Nuclear receptors [BR:
sfon03310
]
1. Thyroid hormone like
1B. Retinoic acid receptor (RAR)
129820063
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Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
129820063
NCBI-ProteinID:
XP_055732867
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Position
22:23609549..23850541
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AA seq
486 aa
AA seq
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MKTASRARPRSPSPRPRPPRSPSPGPQLVQMRRYRPGVGVYPFLFPSVISALPLANRSGS
PPAQPSSSINTPSPAAIETQSTSSEELVPSPPSPLPPPRVYKPCFVCQDKSSGYHYGVSA
CEGCKGFFRRSIQKNMVYTCHRDKNCNINKVTRNRCQYCRLQKCFGVGMSKESVRNDRNK
KKKESPKPELTENYELSAEQEAIIEKIRKAHQETFPSLCQLGKYTTKSSAEQRVRLDLGL
WDKFSELATKCIIKIVEFAKRVPGFTGLTIADQITLLKAACLDILILRICTRYTPDQDTM
TFSDGLTLNRTQMHNAGFGPLTDLVFTFAHQLLPMEMDDTETGLLSAICLISGDRQDLEE
PSKVDQLQEPLLEALKIYVRKRRPSKPHMFPKALMKITDLRSISAKGAERVISLKMEIPG
SMPPLIQEMLENSEGQDGQSSTQGEDGSSPKKGTPKGGTGGKPSPVSPDPSDSDGPTVAP
EEEEDP
NT seq
1461 nt
NT seq
+upstream
nt +downstream
nt
atgaagacagccagtagggccaggccccgctcccctagcccccggccccgaccaccacgc
tcccccagccctggccctcagctcgtccagatgagacgctacaggcctggggttggggtg
taccccttcctgttcccctcagtcatcagcgctctgccgctggctaaccggtcgggttct
ccccccgcacagccctccagcagtattaatactccgtcgcctgcagccatcgagacccag
agcaccagttctgaggagctggtcccaagccccccgtcccccctgcccccgccccgcgtc
tacaagccctgcttcgtgtgccaggacaagtcctcggggtaccactatggtgtcagcgcc
tgcgaaggctgcaagggttttttccgtagatccatccagaagaacatggtctacacgtgt
caccgggacaagaactgcaacatcaacaaggtgaccaggaaccgctgtcagtactgccgg
ctccagaagtgctttggcgtgggcatgtccaaagagtctgtccggaacgaccgcaataag
aagaagaaggagagtcccaagccagagctgacagagaactacgagctgagtgcagaacaa
gaggccatcatagagaagatacgcaaggctcatcaggagaccttcccatcgctctgccag
ctggggaaatacaccacgaagtcgagtgcggaacagcgcgtgaggctggacctgggcctg
tgggataaattcagtgagctggctactaagtgcattataaagatcgtggagtttgccaaa
cgagtacctggttttacaggactcaccatagctgaccagatcacgttgcttaaagctgcc
tgcctcgacatactgattctacgtatctgtacccggtacactccggaccaggacaccatg
acgttctcagacgggctgaccctgaaccggactcagatgcacaacgcaggcttcggcccg
ctcaccgacctggtgttcaccttcgcccaccagctgctgcccatggagatggacgacaca
gagacaggcctgctcagcgccatctgcctcatctctggagaccggcaggatctggaggaa
ccctctaaggtcgaccagctccaggagcctctactggaagctctgaagatctatgtgagg
aagagaaggcccagcaagccacacatgttccccaaggccctgatgaagatcactgacctc
cgcagcatcagcgccaaaggtgcggagcgggtcatctcgctgaagatggagatccctggc
tccatgcctcctctgatccaggagatgctggagaactcagagggacaagacggccagagc
agcacccagggcgaggatggcagcagccccaagaagggcacccctaaggggggtacgggg
ggtaaaccctcccctgtgtcccctgacccctcagatagcgatgggcccacagtggcccct
gaggaggaagaggacccgtag
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integrated database retrieval system
