KEGG   Salvelinus fontinalis (brook trout): 129820334
Entry
129820334         CDS       T11136                                 
Name
(RefSeq) collagen alpha-2(IX) chain-like
  KO
K08131  collagen type IX alpha
Organism
sfon  Salvelinus fontinalis (brook trout)
Pathway
sfon04510  Focal adhesion
sfon04512  ECM-receptor interaction
sfon04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:sfon00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    129820334
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    129820334
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    129820334
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   00535 Proteoglycans [BR:sfon00535]
    129820334
Proteoglycans [BR:sfon00535]
 Extracellular matrix (ECM) proteoglycans
  Others
   129820334
SSDB
Motif
Pfam: Collagen
Other DBs
NCBI-GeneID: 129820334
NCBI-ProteinID: XP_055733378
LinkDB
Position
22:complement(27045405..27073234)
AA seq 707 aa
MTGLSAVLKSWVVLQTLCLALAQVSGPPGPQGNPGLPGPSGTPGSDGIDGEKGPPGPPGP
TGLKGEPGEHGPDGAPGENGIDGLIGAKGDRGPVGNPGPKGQPGPGGEPGPTGPGLPGLA
GAPGPIGLPGKIGQTGSQGVLGAPGPPGIPGPPGKPGPPGKFLGGEEGSADFQCPINCPA
GPKGPQGLQGVKGHKGRAGVLGEPGSIGKLGTKGEVGVSGEQGIPGPPGPMGLRGYPGMM
GPKAEAGPRGYKGINGPVGQPGPPGEEGPQGPPGEAGKKGDLGGRGIKGPQGAVGKKGEN
GLPGIDGKDGTPGIPGIKGAPGQAGRPGGPGHQGTAGLPGSPGTKGGPGGKGEPGPRGHV
GMSGAPGPQGEPGLPGEAGMEGVPGPKGDRGQRGAVGPHGFVGKANYIFLTVRCVSCSPW
PDQYIVFALYYNVLCIYCVTCLSSQGFQGKVGAKGDFGDPGVEGLAGEKGETGLGGEPGP
KGQQGVRGELGFNGPTGDSGKPGDQGPGGLPGPRGLNGERGLPGMPGIVGAAGRDASDQH
IIEVVLKMLQERLAAVAVSARRAVLGGAGVMGPPGPPGPPGAPGGQGPHGLTGARGIPGM
FGASGQIGNTGLKGKRGAKGDRGNSGKPHPGQPGPPGIPGPPGIDGVARNGKPGERGPQG
SAGEAGHPGKAGPTGLPGFCEAAACLAASAYTSPRLQDSARVKGPGV
NT seq 2124 nt   +upstreamnt  +downstreamnt
atgactggactctcggctgtgttgaagagctgggtcgtcctgcagactctgtgcctggct
ctggcccaagtgagcggtcctccaggacctcagggcaatcccggcctgcctgggccctct
ggcactcccgggtccgatggcattgatggggagaaaggacctcctggtcctcctggccca
acaggcttgaagggggagccaggtgaacatggtccagatggagctccaggagagaacggc
attgacggtttgattggagcaaagggagatcggggtcctgtcgggaaccctggacctaag
ggccagcctgggcctggtggtgaacctggaccaactggacccggactgcctggtctggct
ggagccccgggcccaatcggccttcccggtaaaattggacagactggatctcagggcgta
ttgggagcacctggacctccaggaattccaggacccccaggaaaaccaggacctccaggg
aagttcttgggaggagaggagggcagtgcagacttccagtgtccaatcaactgcccagca
gggcctaagggtccccagggactgcagggggtcaagggacacaaaggtcgtgctggtgtg
ctgggagagcctggcagcattgggaaactcggtacaaagggagaggtcggcgtctctggg
gaacagggaatcccaggacccccgggtcctatgggattgaggggttacccaggaatgatg
ggccccaaggcagaggcgggacctcgtggttacaagggcatcaacggaccagttggccaa
cctggacccccaggtgaggagggaccccagggaccacctggagaggctgggaagaaagga
gatttgggtggccgaggtatcaagggcccacagggagctgttggcaagaagggagagaac
ggtctgcctggtattgatggaaaggacggcactcctggcatccctggaatcaagggtgcc
ccagggcaggctgggaggcctggtggtcccggtcaccagggaacagcaggtttgcctggc
agccccggaaccaagggtggacctggaggcaagggagagcctggtcccagaggccatgtt
ggaatgtctggtgccccaggacctcagggtgagcctggtcttcctggtgaagctggtatg
gagggtgttcctggtcctaagggtgacagaggccagaggggagctgtagggccacatggt
tttgtcggcaaggcaaactacatctttcttactgtgcgctgtgtctcctgcagtccttgg
ccagatcaatatattgtctttgctctttattataatgtattatgtatttactgtgtgact
tgtctgtcttcacagggattccaaggaaaagttggggcgaagggagactttggggatcct
ggtgtagaaggcttggctggggagaaaggagagacgggtttgggtggtgagcctggaccc
aaaggacagcaaggagtgaggggagagctaggtttcaacggccccacaggagactcaggt
aaaccaggagaccagggaccaggaggactgcccgggcctcgtggcctcaacggagagaga
ggactgccaggcatgccaggaatcgtgggggcagcgggacgggatgcatctgaccagcac
atcattgaggtggttctgaagatgctgcaagagcgtctggcggctgtagcggtgagcgct
aggcgtgccgtactgggtggagccggtgtcatgggtccccctggtcctcctggaccccca
ggagctcctggtggtcagggcccacacggcctcaccggcgcccgtggcatccctggaatg
tttggagcctccggccagattggcaacaccggactgaaaggaaagagaggagcaaaggga
gaccgaggaaattctggcaaaccacatcctggccagccaggaccccctggaataccaggt
cctcctggtattgacggcgtggctcgaaacggtaagcctggcgagcgaggcccccagggt
tcggcaggagaggctggtcatcccggtaaggcgggccccactggtcttccagggttctgt
gaggctgcagcctgcctagctgcctcggcctacacctcccccagactacaggactccgcc
agggtcaagggccccggagtctaa

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