Salvelinus fontinalis (brook trout): 129820708
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Entry
129820708 CDS
T11136
Symbol
pou2f1b
Name
(RefSeq) POU domain, class 2, transcription factor 1b isoform X1
KO
K09364
POU domain transcription factor, class 2
Organism
sfon Salvelinus fontinalis (brook trout)
Pathway
sfon05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
129820708 (pou2f1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sfon03000
]
129820708 (pou2f1b)
03021 Transcription machinery [BR:
sfon03021
]
129820708 (pou2f1b)
Transcription factors [BR:
sfon03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain POU
129820708 (pou2f1b)
Transcription machinery [BR:
sfon03021
]
Eukaryotic type
RNA polymerase III system
Other transcription-related factors
Octamer transcription factors
129820708 (pou2f1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
POU2F1_C
Pou
Homeodomain
Homeobox_KN
DUF3839
T6_Ig_like
Motif
Other DBs
NCBI-GeneID:
129820708
NCBI-ProteinID:
XP_055733557
LinkDB
All DBs
Position
23:2995076..3032977
Genome browser
AA seq
756 aa
AA seq
DB search
MADGGAASQDESSGPDSRMSNASETSKCGMESQSGDGNTEIQTNGLDFQRQTVQTTSAIT
NAHTQALLQQSKSEDSGAIPTSVQQGVLPQAQLMLAGGQIAGLTLSPAQQQLLLQQAQAQ
LLAAAMQQQSASQQSSTTGASISASAATPITQLPLSQPIQITSIPSGSTHLPGQLSQLGY
PYEMATFSSYLPQLQQLQQQNLTMPQFVLVQPGHHIATQLQPGQFIISQTPQGQQSLLQG
QSLLTQLPQSQANLLQTHPSITLATQPATPTRTIAATPIQPLSHSQTSPPKRLATPSLEE
PSDLEELEQFAKTFKQRRIKLGFTQGDVGLAMGKLYGNDFSQTTISRFEALNLSFKNMCK
LKPLLEKWLNDAVYADNLSSDQALSSPSALGSPGLGMEGLNRRRKKRTSIETNIRLALEK
RFLEQNQKPTSEEITMIADQLNMEKEVIRVWFCNRRQKEKRINPPSGGYSNTGTGGSPIK
TIFTPTIPLVASTASLVTSNTPTTLTVNPVMPLNSTSVSGLTFTGTTIGATTNTASVIST
APMVTAVTSSPSLSPSPTALQATGTGGTLEHTVVTQAPSSLANTLGTGQVMVAGLGLSAA
LQGAAQLPTSASFAAMAGLNQGLMASSQFTPGGALLSLAPGGLGGALNTAMLSNSTLATI
QGLWSALASGGALPITSLDGSGNLLFANTSAGSTPNLMQPLFLNPQNLSLLTTNPVNLVS
AGAAGGGALQVSADHQVTTATVPVPASTITTASRTQ
NT seq
2271 nt
NT seq
+upstream
nt +downstream
nt
atggcggacggaggagcagcgagtcaagatgagagttcaggaccagattctagaatgagt
aatgcgtcagaaacgagtaaatgtggaatggagagtcagagtggggacggaaacacagaa
atccaaacgaatggactggactttcagaggcagacggttcagaccacaagcgcaatcacc
aacgcacacacacaggctctcctccaacagtccaagtcagaagactcgggtgcaattccg
acctccgtccagcagggcgtgctgcctcaggcccagctcatgctggctgggggacagata
gctggattgaccctgtctccagcgcagcagcagttgttgttgcaacaggcccaggcccag
ctcctagcagcagccatgcagcagcagtcagccagccagcagagcagcactacgggggca
agcatctctgcctctgcagccacccctatcacacaactgccactgtcccagcccatccag
atcacctctattccctctggttctacccatcttccaggccagctaagccagctgggatac
ccctatgagatggcgaccttcagcagttacctacctcagttacaacagctgcagcagcag
aacctgaccatgccccagtttgtcctggttcaacctggccaccacatcgccacccagctg
cagcctggccagttcatcatctcacagacgccgcagggccagcagagtctcctgcaaggc
cagagtcttctaactcaactacctcaaagccaagccaacctcctgcagactcatcccagc
atcacgctcgccacacagccagcaactccgacccgcacgatagcagccacgcccatccag
cctctgtcccacagccagacctcgccccctaaacgcctggccacgcccagtctggaggag
cccagtgacctggaggagctggaacagtttgccaagaccttcaaacagagacgcatcaaa
ctgggcttcacacagggagatgttggcctggccatgggcaagctgtacggtaacgacttc
agccagaccaccatctcccgcttcgaggccttgaacctgagctttaagaacatgtgcaag
ctgaagccactgctggagaagtggctcaacgatgcagtttatgcagacaacctgtcgtct
gaccaggccctgtctagccccagcgccttgggctcccctggccttggtatggaggggctg
aaccgccgacgcaagaagaggaccagcatcgagaccaacatccgcttggccttagaaaag
agatttctggaacagaaccaaaaacctacctctgaggagatcaccatgatcgccgaccag
ctcaacatggagaaggaggtgatccgggtttggttctgtaaccgcaggcagaaagagaag
aggatcaacccccccagcggtgggtacagcaacacagggacaggcggcagccccatcaaa
accatcttcacccctacgatccccctggtggccagtacggccagccttgtgaccagtaac
acaccgaccacactgactgtaaacccagtgatgcctctcaacagcaccagcgtgtctggc
ctgaccttcacaggcacgaccataggagcgaccacaaacacggcatcagtcatctccact
gcacctatggttactgcggtgaccagctccccatcactaagcccctcccccacggccctc
caggccacggggacgggcggaacactggagcacacggtggtcacgcaggcaccgtcgtcc
ctagcgaacactctggggacgggtcaggtgatggtggctggactgggcctgtcggccgcc
ctgcaaggtgccgcccagttacccaccagcgctagtttcgctgccatggccgggcttaac
caaggacttatggcgtcatcgcagttcactcctggaggggccttgctgagcttggctcca
ggggggctgggaggggctctgaacaccgccatgttgagcaacagcaccctagccaccatc
caaggtctgtggagcgctctggcatcaggcggcgctctccccataacctcgctggacggg
agcggtaacctgctgttcgccaacacctccgccggcagcacccccaacctgatgcaaccc
ctcttcctgaacccccagaacctgtccctgctcaccaccaaccctgtcaacctggtgtca
gccggagctgctgggggcggggccctgcaggtctcagctgaccaccaggtcaccacggcg
actgtaccagttcccgcttctaccatcaccactgcctccaggacccagtga
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integrated database retrieval system
