Salvelinus fontinalis (brook trout): 129820815
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Entry
129820815 CDS
T11136
Name
(RefSeq) lymphoid enhancer-binding factor 1-like isoform X1
KO
K02620
transcription factor 7
Organism
sfon Salvelinus fontinalis (brook trout)
Pathway
sfon04310
Wnt signaling pathway
sfon04520
Adherens junction
sfon04916
Melanogenesis
sfon05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
129820815
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
129820815
09150 Organismal Systems
09152 Endocrine system
04916 Melanogenesis
129820815
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
129820815
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sfon03000
]
129820815
Transcription factors [BR:
sfon03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG TCF-1
129820815
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
CTNNB1_binding
HMG_box
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
129820815
NCBI-ProteinID:
XP_055733780
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All DBs
Position
2:complement(51495826..51561625)
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AA seq
511 aa
AA seq
DB search
MPQLSSGGGDDLGANDEMISFKDEGDQDEKIQENAFTERDLADLKSSLVNESETNQSPNA
AAVRRGQQNEHRGYQEKHREHLDGVSKHQDGGMYKTAYPGYPFLMLPDPYIPNGSVSPSS
NKVSVVQQSHGMHPLTSLLPYSNDHFNPSPPHLPTDMSQKGVHRPQSQDISGFYSLPQGG
VGQMPPSMGWQSQPVYPLSSCGFRQPYSSSLPNSSSYPRFSHSLMLGPGMHSTGIPHPAI
VPPSGKQDHHDHYDRNMYAKPHQEPKREKEPKKPVIKKPLNAFMLYMKEMRAKVIAECTL
KESAAINQILGRRWHALTREEQAKYYELARKERQLHMQLYPSWSARDNYEAGLREGAGEK
NKADWGKKKRRKREKQQDSTTDPGSPKKCRARFGLNQQTDWCGPCRRKKKCVRYLQGGWC
ASPTSSDGSAIDSPPSPVDGVPPQHPSLPSSPSPASPSHIPLHPQPSKQHTPLILSKPKT
TELSLKALIESSQQHDNLSHHHHDCTLPKSH
NT seq
1536 nt
NT seq
+upstream
nt +downstream
nt
atgcctcagctcagtagcggtggaggagatgatcttggagcgaacgatgaaatgatatcc
tttaaggatgaaggcgaccaagatgagaaaattcaagaaaacgctttcacagaaagggac
ttagctgacctcaaatcgtctctggtgaatgaatccgagacgaatcaaagtccgaacgca
gcggcggtcagacggggacagcaaaacgaacacagaggttatcaagagaaacaccgggag
catcttgacggcgtttccaaacatcaagatggaggaatgtataaaacagcgtatccgggg
tacccgtttctcatgctgcctgacccatacatccccaacggatcagtgtcaccatcttcc
aacaaagtttcggtggtccagcagtctcacgggatgcaccccctgacgtccctgttgccg
tacagcaacgaccacttcaaccccagccctcctcacctgcccacagacatgagccagaaa
ggcgttcacaggccccagtcccaggacatctcaggcttctactccctacctcagggcggt
gtgggacagatgcccccctccatgggctggcaaagtcagcctgtctatcccctgtcctca
tgtggattcagacagccctactcctccagtctccccaacagctcttcctaccccaggttc
tctcactctctgatgctagggccaggcatgcactcaacggggatcccccatccagccatc
gtgccaccttcaggcaaacaggaccatcatgaccattacgacaggaacatgtacgctaag
ccacaccaggagcccaagcgggagaaggagcctaagaagccagtgatcaagaagcctctg
aatgctttcatgctgtacatgaaggagatgagggccaaggtgatcgctgagtgcacgctg
aaggagagcgctgccatcaaccagatacttggcagaaggtggcacgctctgacccgggag
gaacaggccaaatactatgagctggccaggaaggagcggcagctacacatgcagctctac
cccagctggtccgccagagacaactacgaggcgggccttagagagggcgcgggggaaaag
aataaagctgattggggcaagaagaagagaagaaaaagagagaagcagcaggactccacc
acagaccctggctctcctaagaaatgcagagctcgcttcggcctcaaccaacaaacggac
tggtgtggtccctgcaggaggaaaaagaagtgcgttcgataccttcaaggaggatggtgc
gccagccccacttcttccgatggaagcgctatagactcgcccccctcccccgtcgacggc
gtcccccctcagcacccctccctgcccagctcgccctcgcctgcttccccctcacacatc
cctctgcacccccagcccagcaaacaacacacgccccttatcctctcaaaacccaagacc
acagaactttctctcaaagctttaatagaatcatcccaacagcacgacaatctcagtcat
catcatcatgactgtacgctgcccaagtctcactag
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