Salvelinus fontinalis (brook trout): 129820850
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Entry
129820850 CDS
T11136
Name
(RefSeq) protocadherin-8-like isoform X1
KO
K16499
protocadherin delta 2
Organism
sfon Salvelinus fontinalis (brook trout)
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
sfon04515
]
129820850
Cell adhesion molecules [BR:
sfon04515
]
Cadherins
Protocadherins
129820850
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_CELSR2_9th
Motif
Other DBs
NCBI-GeneID:
129820850
NCBI-ProteinID:
XP_055733859
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Position
23:11594029..11598900
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AA seq
971 aa
AA seq
DB search
MGFCGFRRVGECVLLAGLFYSVQSTTTRYYTYEEDAPGTEIGNLSQDLKIDPAEDPQTSF
RFMQETNSCVIQMREIDGLLTVGETIDREQLCLRSPRCLVTFDIVAFSKEKFQLIHVEIE
VRDINDNSPQFLHNETTLEISENVQVDSRFPLDIAVDHDVGNNYIQSYHISPSSHFIVDV
RSREDGVKYAELVLVKTMDREAEDSYTVEVTATDGGEPPRSGSMTVHIKVLDFNDNSPTF
EHNSLKVELYEDSPVGYQVLKVHAFDPDVGINGEVVYGFVEDTSSETMRIFNIDRISGAV
TLKTLVDYEKKISYELKIKASDLGTNSIPSTCKVVVDVVDVNDNAPEITIKPKTSTSDDV
AYITEAAAEESFVALISTSDSDSGSNGYVRSSLHGHEHFKLQQAYGDSFMIVTTTTLDRE
TIPEYNLTVVAEDLGTPPFKTIKQYTIRVTDENDNAPLFSKSIYEVSVLENNIPGSYITT
VVARDLDRGKNAKVSYKLIDSEVVGEASISTYVSIDPVSGSLYSRRSFDFETLQQIELTI
QAEDKGSPQLSSTSVIRIKVVDQNDNYPYFTFPVMLNDSAEIPLPVNAPLGYLALRVKGQ
DEDEGMNGELSYRIVQGDSKIFSINKDTGEIAVKQGLASAIGDVLEIKIALSDSGRSPLS
SSATIRFVVTDLQLSDDQLVIVLRSSDEKSAGLDISVVVIIILGGGCTLLLIAIATVVIT
CKLNRGGKDHDSKRDVTHILFDSRHHPRLNSAEPNMFGDPRGFLNERTSSSLDESSLYEE
KSGELESQMFLPPKPFQPSSVWQGDKYCPQISSGIDQQSVKDSGKGDSDFNDSDSDISGD
GGKRNLRTFQPWAKGSFHAANTLAVDCQGTYCVIPTQSFQAPRDNAYTIGFIQAPVYNNA
HAYPHSWKDSGYNTSIPKARNTMQTFSNHTGTLPSYFTHQKRQSPAGLDEIQEHNQDITT
VATISEVATIL
NT seq
2916 nt
NT seq
+upstream
nt +downstream
nt
atgggattctgcgggtttcgacgagttggagagtgcgtgttgcttgctggtctgttctac
tcggttcagtctacgactacaaggtactacacgtatgaagaggatgcgcccgggacagag
attggaaatctgtctcaggatttaaagatagacccagctgaggaccctcaaacatctttc
cgcttcatgcaggagaccaattcgtgtgtgattcaaatgagggagattgatggactttta
accgttggggaaacaattgaccgggagcagctgtgcctgaggtccccgcggtgtcttgtc
accttcgacatagttgccttctccaaagaaaagtttcagctgattcacgtagagatcgag
gtaagggacattaacgacaattcaccccagtttctccacaacgagacgacccttgaaata
tccgagaatgttcaggtggactcccgattcccgttggacatcgctgttgaccatgatgtc
ggcaataactacatccaaagttaccatatctctccctccagccatttcatagtcgatgtg
cgcagcagggaggatggagtgaagtatgctgaacttgtgcttgtgaaaacaatggacaga
gaggctgaagattcctatacagttgaagtgacggcaacagatggcggagagccacccaga
tccggatcaatgactgttcatatcaaagtgctggattttaatgacaacagcccaacgttt
gagcacaactcactaaaagttgaactttacgaagattctcctgttggttaccaagtgctg
aaagtgcatgcgtttgatccagatgttggcattaatggcgaggtagtgtatggatttgta
gaagacacatcatctgaaacaatgcgtatttttaatatagaccggatttccggtgctgta
actttaaaaacattggttgattacgagaagaagatatcctatgaactgaaaattaaagca
tccgatttaggcactaattctattccatcgacttgcaaagtggttgttgatgtcgtagat
gtaaatgataacgcaccagaaatcaccatcaagccaaagacctcgacgagtgacgatgtg
gcttacatcacggaggccgcagcggaggaaagttttgtggcgctaatcagcacctcggac
agcgactctggctcgaacggttatgtacgcagtagcctacacgggcacgaacatttcaag
ttacaacaggcctacggggacagttttatgattgtaacaaccaccactttagatagagaa
acgatcccagagtataacctcaccgtagtggctgaagaccttggaactcctcctttcaaa
accatcaagcagtataccatcagagtgacggacgagaacgacaacgcccccctcttcagt
aaatccatttatgaagtttctgtcctggaaaataatattcccgggtcatatataactact
gttgtagcacgggaccttgatcggggtaaaaacgccaaagtgtcatataaactcatagac
tcagaggttgtcggggaggcttccatttcgacgtatgtgtctatagacccagtgtcaggg
tcattgtatagccggagatctttcgattttgaaacgctccagcagattgaattaaccatc
caggctgaggacaagggctcacctcagctgtcaagcacatccgtgatcagaatcaaagtg
gttgatcagaacgacaactatccctatttcacctttcctgttatgcttaatgactctgct
gaaattcctcttcctgtcaatgcaccattggggtatctggcactacgggtcaaaggtcag
gatgaggatgagggtatgaatggtgagctcagctacagaatcgtacaaggtgactctaag
atattttcaatcaataaagacactggagagatagctgtaaaacagggtctggcctctgct
attggagacgtgttggaaatcaagattgcattgagtgacagtgggagatcccctctctcc
agcagtgccaccattcgctttgttgtcacagacttgcagctctcagacgaccaacttgtc
attgtattacggtcaagtgatgagaaaagcgcaggcttggatatttcagtagtagtaatc
attatactcggcgggggttgtactctgctgctgattgccatagcaactgttgttatcaca
tgcaaactgaaccgaggagggaaggaccatgactccaagagagacgtgactcacatcctg
tttgactccaggcatcatcccaggctcaactctgcagaacccaacatgtttggggaccca
agaggtttcctcaatgaaaggacttcttcatcgcttgatgagtccagcctatatgaagag
aaaagtggagagttggagtcccagatgttcctgcctcccaagcctttccaaccatcatct
gtgtggcaaggggacaaatactgcccacaaattagcagtggcattgaccagcagagcgtg
aaggacagtggaaaaggagacagtgacttcaatgacagtgactctgacatcagtggggat
ggaggcaagaggaaccttcgcaccttccagccctgggccaaaggttcattccacgccgct
aacaccctcgctgtggattgccaaggcacttactgtgtaattccaacccaaagcttccag
gctcccagagacaatgcatacacaataggttttatccaagcaccggtctacaacaatgcg
catgcctatccccactcctggaaagactccggctacaacacaagcattcccaaagcaaga
aacaccatgcagacattctctaatcacaccggcaccctcccgtcttacttcacacatcaa
aagagacaatctcctgccggacttgatgaaattcaggagcacaaccaagatattactaca
gtggcaaccatatctgaagttgccaccattttgtaa
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