Salvelinus fontinalis (brook trout): 129820851
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Entry
129820851 CDS
T11136
Name
(RefSeq) protocadherin-17-like isoform X1
KO
K16499
protocadherin delta 2
Organism
sfon Salvelinus fontinalis (brook trout)
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
sfon04515
]
129820851
Cell adhesion molecules [BR:
sfon04515
]
Cadherins
Protocadherins
129820851
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Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_CELSR2_9th
PRIMA1
Cadherin_C_2
Motif
Other DBs
NCBI-GeneID:
129820851
NCBI-ProteinID:
XP_055733862
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Position
23:11645117..11691820
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AA seq
1107 aa
AA seq
DB search
MRLPVIFFLLFWAKARTLKNLNYSVPEEQGPGTVIGNIAKDAGFGPVEKGKKSNFRVLEN
SAPHLIDVDSESGLLFTKQRIDRETLCKRNPKCQLSMEVFANDKEICMIKIDVVDINDNS
PSFPSDHINIDISENAAAGTRFPLTIAHDSDSGQNGIKTYQVTRDDYNTFSLDLKLRGDG
TIYPELVVQRPLDREDQSHHTLLLTAIDGGEYPRSGSMQINVRVTDSNDNSPVFDKPGYM
LELPENSPPGRILIDVNATDQDEGSNGQVVYSFSGYASDRVQELFSIDPKTGVIKIHGEI
DYEDNPTIEFDVQAMDLGPNPIPGHCKISVKVLDKNDNWPVISFVSVRQGAISEAAPPES
VIALVRVTDKDSGRNGQLQCRVLGNVPFRLQENNDNFYTLLTDRPLDRELKDEYNVTIVA
RDNGIPSLNYTKSFTVKILDENDNAPRFTKTVYVLQVPENNIPGEYLGSVLAHDPDIGQN
GTVSYSILPSHIGDVSVYTYVSVNPTNGAIYASRSFNYEQTKFFEFKVQAKDAGSPHMEG
SATVRVSVLDVNDNLPVIVLPLMLNDTAEIMVPRNVGLGYIVTTVRAVDQDHGESGRLTY
EIWEGNEEHLFEMDPVAGEVRTAHAVWEDVAPAVELVVKVTDHGKPPLSAVAKLIIKANT
GAMAAGESSASGEQQHWDMSLPLIITLCIISLMLLAVMTTIAVKSKHQDKEAGNYNCRMT
EYSNSNPPVGNGKKKRINKSDIMLVQSEVEERDSVSRMNVVSSPSLITSPICFDYQATSP
LPLTLPRSEVMYLKTTFNSLTVPRAGCHSSFAGLTTETPMNRMSVIQTDNFPSEPNNVAN
RQPFAQSSSTFKDAERASLRDSGHGDSDLADSDQDTNKGCACNTSAREALKMKATAVNGQ
PLDQGQGRSVHCTDECRALGHSDRCWMPKLRVGGQADSSDNRTDLFIPVGMEAMVETEIY
GSLNRSAARKTLSTFGKEQRDSTILVANIKPYFKSQRARSPQLQECSSASSSPTKGNTPL
DSHTKGPREEVGRDGEGGSDSSAYGPPDGQCSPPHTELEEPSYMACDLRPKSLSNSLIHS
SEIRSGIISQECGGLECVRPNQQDSGD
NT seq
3324 nt
NT seq
+upstream
nt +downstream
nt
atgcgtcttcctgtcatatttttccttctcttctgggctaaagcccggacactgaaaaat
ctcaattattctgttccggaggagcagggacctggaactgttatcggaaacattgctaag
gatgccggatttggaccggtggagaaaggaaaaaaatcgaactttcgagttctggagaat
tctgctccacatctcattgatgtggattcggagagtgggctgctttttaccaaacagcgt
attgacagggagacattgtgcaaacgcaaccccaagtgtcagctctccatggaagtgttt
gccaacgacaaggaaatatgcatgatcaagattgatgtagtggatataaacgacaactcc
cccagtttcccctcagatcacatcaatattgatatttcagagaacgcagctgctgggaca
cggttccctttaacaattgcacacgactcagattctggacaaaacggaataaagacttat
caggtcaccagagatgattataatacattttctttggacttgaaattgaggggtgatgga
accatatatcctgaattggtggttcagcgccctctagatagggaagatcagtctcatcac
actctccttttgacagccattgatggaggggagtatccaagatcagggtccatgcaaatc
aatgtgagagttactgattcaaacgataatagcccagtatttgacaaacccggctacatg
ctggagcttcctgaaaactcgccacctggaagaatactgatagatgtgaatgcaacagac
caagatgagggcagcaatggacaggtagtctattctttcagtggatatgcatctgacaga
gtccaggagttgttttctattgatcccaaaacaggtgtcattaagattcatggagaaatt
gactatgaggataatccaaccattgaatttgacgtgcaggccatggacctgggacctaac
cccatccctggccattgtaagatttcagtcaaagtgcttgacaagaatgataactggccc
gtgataagttttgtctccgtccgccagggagctatcagtgaggcagcgcctccagaatct
gtcatagccctggtgagagtcactgataaggattctgggagaaatggccagctccagtgc
agggtgcttggcaatgtacctttcaggctgcaggaaaacaatgataatttttacactctg
ctcacagacagacctctagacagggaactgaaagacgaatataatgtgaccatagtggcc
agagacaatggaataccctccttgaattacaccaaatcatttacagtgaaaatcttagat
gagaatgacaatgcgcctcgtttcaccaagacagtgtacgtgctccaggtgcctgagaac
aacatcccaggggagtacttaggctcagttctggctcatgatccagatataggtcagaat
ggaactgtgtcttactccattttaccgtcgcacatcggagacgtgtcagtttacacctac
gtgtctgtcaatcctaccaacggagccatttacgcctcaaggtctttcaactacgaacaa
actaagttctttgagttcaaagttcaagctaaagacgcaggatctcctcatatggagggc
agtgccacagtcagggtcagtgtgcttgacgtcaatgacaatctaccagttattgtatta
cccctaatgctaaatgatactgcggaaatcatggtccctagaaatgtaggcctggggtac
atagtgaccacagtgagagcagtcgatcaggaccacggggagagcggtcgtctgacctac
gagatctgggagggtaacgaggaacacctgtttgagatggaccctgtggccggcgaggtg
aggactgcccatgctgtgtgggaggacgtggccccagctgtggagctggtagtgaaggta
accgatcacggcaagcccccactgtctgccgtggctaagctgatcattaaggccaacaca
ggagccatggcagcaggggagtccagcgccagcggggagcagcagcactgggacatgtcc
ctgcccctcatcatcaccctctgcatcatctccctcatgctcctggctgtcatgactacc
atcgccgttaagtccaagcatcaagataaggaggctgggaattataactgccgtatgacc
gagtactccaactccaatcccccggttggaaacggcaagaagaagaggatcaacaagagc
gacatcatgctggtgcagagcgaggtggaggagagggactctgtgagcaggatgaacgtg
gtgagcagcccgtctctcatcacctcgcctatctgtttcgactaccaggcgaccagcccc
ctgcctctcacgctgcccaggtcagaggtcatgtatctgaaaaccacttttaacagcctg
acggtacctcgggctggctgtcactcaagctttgcggggcttaccacagagactcctatg
aatagaatgtcagtgatacagacggataattttccttcggagccgaataacgtggccaac
aggcaaccatttgctcaaagcagctcaacttttaaggatgcagagcgcgcgagcctccga
gacagtggccatggtgacagtgacctggctgatagtgaccaggatactaataaaggctgc
gcctgcaacacgtctgccagggaggccctcaagatgaaagccacagcagttaatggccag
cctcttgaccagggacaaggcagatctgttcactgcacagatgaatgtcgtgcgctgggc
cattctgacagatgctggatgccaaagttacgggtaggaggccaagcagacagcagcgat
aatcgcaccgaccttttcatcccagtgggaatggaggccatggtggagacagagatttat
ggcagcctcaaccgcagcgcagccagaaaaaccctcagcacgttcggcaaggagcagcgg
gacagcaccatcctagtggccaacatcaaaccctacttcaagtcgcagcgtgcccgcagt
ccccagttgcaggagtgctcctctgcgtccagcagccccaccaaagggaacacacccctg
gactcccacaccaaagggcctagggaggaggtggggagggacggggaggggggctcagac
agcagtgcctatggacccccagacggccaatgttcaccgccccatacggaattggaggag
ccgtcatacatggcttgcgacctcaggcccaagtccctgtcgaacagccttatccacagc
tctgagatcagatctgggatcatcagccaggagtgtggggggttggagtgtgtccgtcca
aaccagcaggactctggggactga
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