Salvelinus fontinalis (brook trout): 129820857
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Entry
129820857 CDS
T11136
Name
(RefSeq) ribosomal RNA processing protein 1 homolog B-like isoform X1
KO
K14849
ribosomal RNA-processing protein 1
Organism
sfon Salvelinus fontinalis (brook trout)
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
sfon01009
]
129820857
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sfon03009
]
129820857
Protein phosphatases and associated proteins [BR:
sfon01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
129820857
Ribosome biogenesis [BR:
sfon03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
129820857
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nop52
Motif
Other DBs
NCBI-GeneID:
129820857
NCBI-ProteinID:
XP_055733875
LinkDB
All DBs
Position
23:11980513..11986866
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AA seq
980 aa
AA seq
DB search
MAPVQQEPAIQFAQRLASNEKPMRTKAIKKLRKYISVRSQKIQGGFECDELLKLWKGLFY
CLWMQDKPLLQEELSNQISGLMHNFQNTQSQFMFLETFLQTIKREWTGIDRLRMDKFFQL
VRFVFRNTFEMMKRKEWETSVVTRFLELLTAQVLHSSSGAPCGLQFHILDIYMTELAAVG
SAELTAAQNMTFIDPFCKTASKTKDRILLKAICSSIFSAIVDQAPFAIEDLLREVKATGG
GAEESDSGQASEEEVVEKEPPKGKKTAKGPFKKTTGGQTNGTVSTEEEDDDGLEDEDDDE
MLHLESDSESEMPDDAGIGPVLQFDYLSLADRLFGLARRSNTPSHNRQRLYKVVKTLRDL
SEGVFPQDEYPEEVSTDEDDDEMFGSRKRMKRGRGFGEEEEESSPAKKWKGKKKDSKART
SDQTAATDASKPAETPGDSNNKKKKRRRKKKKTGEVKTEEQNGVAVKSEAKAEEQNGVAV
KSEVKAEKDTTASAPQMTDSKEAETEPSVPAKGTDTGAALLKEKAKVTAMETGVRSGTPQ
DVVVGNLSSVSVMEEDQKKQSETPVTDATSSKKKNIKKSKTPAPKEEKEEVAEPERSAPE
TATTTLRRKKSTKQEPAEQTTLEEVEMTLETVDEATPPKKRRRKRVKRTAETDTTPAEEP
PADLRIAPTPLKKKKLKVAKAVEESAEDEMQPETEAGVLPVDAKVEPAYVAVLTPLKKKK
KHAKAEEQSVEAMGETPPKADANLTLTDAEVQLLEAATPTPLKKKKKSSGRVAQEPETTT
VEESVSAEQPTDADLDTPLKKGKKKKRKVPVVIEVEAEVNGMAGGKKSKLSNDSKELSTP
VSAKKTQKMAPKKAGAESDFITFQNHATIPTPLFFKISKGSPSTPLSSKKKKLCRTPKSE
SKKVTFGLNKNKTAGSPEFRKTDRSLLVSPEGSSRVPFDPQQKPLFGVLKSPEASLTKSS
KKTKSTLKTTPKRPTAADFF
NT seq
2943 nt
NT seq
+upstream
nt +downstream
nt
atggcgccggtacaacaagaaccagcgatccagttcgctcaaagattggcttctaatgag
aagcccatgcgaacaaaagccatcaagaagctacgaaaatatattagtgttaggtcacag
aaaatccaaggtgggtttgaatgcgacgagttactcaaactatggaaaggactcttttat
tgcctgtggatgcaggacaagccacttcttcaggaggagctgtcgaatcagatctctggt
ctgatgcacaacttccagaacacccagagccagtttatgtttctggagaccttcctgcag
accatcaaaagagaatggactggcattgacaggcttcgcatggataagttcttccagctg
gttcgtttcgtgttcaggaacacttttgagatgatgaagaggaaagaatgggagaccagt
gtggtgaccaggtttctggagctcctgactgcccaggtcctccacagctccagcggagcg
ccctgtggattacagttccacatactggacatctatatgaccgagctggctgcagtcggc
tccgctgagctcacagcggctcagaacatgacattcattgaccctttctgcaaaacagca
tctaaaacgaaagatcggatcctgctcaaggctatctgcagcagcattttcagcgccatc
gtggaccaggctcccttcgccatcgaagacctgttgagggaagtgaaggctacaggtgga
ggggctgaggagtccgactcgggacaggcttctgaagaggaggtggtagagaaggagccc
cccaagggcaaaaaaactgcaaagggacccttcaagaaaaccactggagggcagaccaac
ggtactgtatcaaccgaggaggaagatgatgatggtctggaggatgaagacgatgacgaa
atgcttcatttggagagtgactctgagtctgagatgccagatgacgcggggatcggacct
gttctccagtttgactaccttagcctggcggacaggctgtttgggctagccagacgcagc
aacacccctagccacaacagacagagactgtacaaagtcgtcaagactctccgggatctc
agtgaaggagtctttccacaggatgagtacccagaggaggtgtcgacagatgaggatgat
gatgaaatgtttggcagcagaaagaggatgaaacggggacgaggcttcggggaggaggag
gaagagagctcaccagccaagaaatggaaaggcaagaaaaaagactccaaagcaagaact
tctgaccagactgccgcaacagatgccagtaaaccagcagagactcccggagactccaat
aacaagaagaagaagaggaggaggaagaagaagaagactggagaggtgaagactgaagag
cagaacggggtggcggtgaagtcagaggcgaaggctgaagagcagaacggggtggcggtg
aagtcagaggtgaaggctgagaaggacacaactgcttctgcaccgcagatgacagactct
aaagaagcagagactgagccctctgtcccagccaagggcaccgatacaggagcggctctc
ctgaaggagaaggcaaaggtgacagccatggagacaggggtccgatcaggaactccacag
gatgtagtggtaggtaacctatcatctgtctcagtcatggaggaagaccagaagaaacaa
tcagagactccggtaacagacgccacatcttccaagaagaaaaatatcaagaagtccaaa
acacctgcaccgaaggaggagaaggaagaggtagcagaaccagaaagatctgcccctgag
actgctactaccaccctgaggaggaagaaaagcaccaagcaggagcctgcggagcagaca
accctagaggaagttgaaatgacgttagaaacagtagacgaggccaccccaccgaagaag
aggaggagaaagagggttaaacggaccgctgagacagacacaacaccagccgaggagcct
ccagctgacctccgcatcgcccccacgcccctgaaaaagaagaaactaaaggtggccaaa
gctgtagaggagagcgctgaggatgaaatgcagccagaaactgaagcaggcgtccttcct
gtagatgccaaggtggagccagcatatgtcgctgtattaaccccgctcaagaagaagaag
aaacatgccaaggctgaagaacagagcgtggaggccatgggtgaaaccccgccgaaagca
gacgcaaacctcacactgacagacgctgaggtacagttgctggaggccgccacacctacc
ccgctcaagaagaagaagaagagctctggacgggtagcgcaggagccagagaccacgaca
gtggaggagagcgtttcagcggagcagcctacagatgctgacctggacacgcccctgaag
aaagggaagaagaagaagaggaaggtcccggtagtgatagaggtcgaggctgaggtcaac
gggatggctggaggcaagaaatccaaactgagcaacgacagcaaagagctttccacgccg
gtgagcgccaagaaaacacaaaaaatggcgcccaagaaggcaggggcggagtctgacttc
atcacgttccagaaccatgccaccatccctactccccttttcttcaagatctccaaggga
agccccagcacaccgctatccagcaagaagaagaagttgtgtcggactcctaagtccgaa
tccaagaaggttaccttcggactcaataaaaacaaaactgcaggatccccagagttcagg
aagactgaccgcagcctgctggtgagtccggaggggtcgtcccgagtgccctttgacccc
cagcagaagcccctgtttggggtcctgaagtccccagaggcctctcttaccaaaagcagt
aagaagaccaagagcaccctgaaaaccacccccaaacgccccactgcggctgacttcttc
tag
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