Salvelinus fontinalis (brook trout): 129820974
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Entry
129820974 CDS
T11136
Name
(RefSeq) PDZ and LIM domain protein 4-like isoform X1
KO
K23353
PDZ and LIM domain protein 1/2/3/4
Organism
sfon Salvelinus fontinalis (brook trout)
Pathway
sfon04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
129820974
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
sfon04990
]
129820974
Domain-containing proteins not elsewhere classified [BR:
sfon04990
]
LIM domain-containing proteins
PDZ-LIM family proteins
129820974
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GFIT
Motif
Pfam:
DUF4749
PDZ
LIM
PDZ_6
PDZ_2
SNAPC3
Motif
Other DBs
NCBI-GeneID:
129820974
NCBI-ProteinID:
XP_055734134
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Position
2:complement(52562015..52634448)
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AA seq
380 aa
AA seq
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MPHTVTLNGPSPWGFRLVGGRDFSTPLTISRVTPGSKAAQGDLCPGDTILVINGDSTETM
THMEAQNRIKACMGELTLAIIRSGDKVWSPNVIEDGKTSPYMATLETESPQNFRPISTGP
MTSGYTSGYSSSYSRGNNSSGYSRKPSHTPELPHLNNGTSKQSNHAQYNNPASMYAHNNG
SNGDRDRVLPKQMGGLSLSSPHSPEPPMRSPMGRNGNGHSFEVTTESDVYKMLQDTEEPV
SAPKQSGSFKYLQGILEAEDGGVSPTDMSGVRGLRSPDRSPVPKLGSPIPGHMGPMPGLQ
KLPQCTRCGNGIVGTIVKARDKLYHTECFMCDDCGLNLKQRGYFFIEENLYCETHAMARV
QPPEGYDVVAVYPNSKVELV
NT seq
1143 nt
NT seq
+upstream
nt +downstream
nt
atgccccacaccgtgacattgaatggaccctcaccttggggttttcgactggtcggtgga
agagacttcagtacaccgttaactatttcgagggtgacaccgggcagtaaggcagcacag
ggggacctgtgtcctggagacaccatcctggtcatcaatggagacagcacagagaccatg
acacacatggaggcccagaacaggatcaaggcctgcatgggggagctcacactggcaata
atcaggtcaggagacaaagtctggtctccaaatgttattgaagatggcaagacaagtcca
tacatggccacattggagactgagtcaccacagaatttccgacccattagcactggacca
atgaccagtggatacaccagtggttacagcagcagctacagcagggggaacaacagcagc
ggttacagccgaaaaccctcccacactcccgagctgccgcatctcaacaacggcacctcc
aagcagtccaaccacgcgcagtacaacaacccagccagcatgtacgcacacaacaacggc
agcaacggagaccgagacagggtcttgccaaaacaaatgggcggcctgagcctgagttcc
cctcacagccctgagcctccgatgcgttctccaatgggccgtaatggaaacggtcatagt
tttgaagtcactacagagtcagatgtgtacaagatgctgcaagacacagaggagccagtc
tccgcacccaaacaatccggctccttcaaatacctacaaggcatattggaggcagaggat
ggaggtgtgtcccccactgacatgtctggagtgagaggccttaggtccccggaccgatcc
ccagtccctaaactgggcagccccatccccggccacatgggccccatgcccggcctacag
aaactaccccagtgcacgcgctgtggcaacggcatagtgggaaccatcgtgaaggccaga
gacaaactgtaccacacagagtgcttcatgtgtgatgactgcggcctgaacctcaagcag
aggggctacttcttcatcgaggagaacttgtactgtgagacccacgccatggcccgtgta
cagccgccggagggatatgacgtggtcgccgtctaccccaactccaaggttgaactggtc
tga
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