Salvelinus fontinalis (brook trout): 129821095
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Entry
129821095 CDS
T11136
Name
(RefSeq) CLIP-associating protein 1-like isoform X1
KO
K16578
CLIP-associating protein 1/2
Organism
sfon Salvelinus fontinalis (brook trout)
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sfon03036
]
129821095
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
sfon04812
]
129821095
Chromosome and associated proteins [BR:
sfon03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Microtubule-associated proteins
129821095
Cytoskeleton proteins [BR:
sfon04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Cytoplasmic linker proteins (CLIPs)
CLIP-associating proteins
129821095
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CLASP_N
CEP104-like_TOG
XMAP215_CLASP_TOG
HEAT_EF3_N
HEAT
HEAT_EZ
TOR1L1_N
HEAT_DAAF5
Cnd1
Sec7-like_HUS
RTP1_C1
Dopey_N
ParcG
TAN
MMS19_C
DUF2726
Motif
Other DBs
NCBI-GeneID:
129821095
NCBI-ProteinID:
XP_055734348
LinkDB
All DBs
Position
23:complement(29860226..29949375)
Genome browser
AA seq
1607 aa
AA seq
DB search
MEVNMEYCLAQVVQKDLGRKVQVGQELIDYIVDKEKSQDLEQDQTALDRMVDGIATTWVN
SSNFKVALLGIDLLSALVTRLQDRFRNHVGTVLASLIDRLGDSKDQVRDQDQILLLKIME
QAASPQYVWDRMLGGFKHKNNRTREGVCLCLISTLNMYGAQGLTLSKIVPHICNLLGDPT
SQVRDAAMGCLVEIYRHVGERVRMDLSKKGLPQSRLNVIFSRFDEVQRSGNMIPSSGSDK
NFDDEDSVDGGRSSSSASSCKAPPSGRRAVAAVSVRRPSSATGPGKISAKDAAAGAVDEE
DFIKAFEEVPTIQIHSNREMEDNLSKVREVLSDDKNDWEHRVVALKKVRSLLLAGALEYD
SFPQQLRLLEAPLKLSAKDLRSQVVREACITLGYLSMLLGNKFDHCAETLMPTLLNLVPN
SAKVMATSGMAAIRLILRHTHYSRLIPIITSNCTSKSVAVRRRSYEFLELLLLEWQTHTL
ERHVAVLTETIKKGIHDADSEARSVARKCYWGFHGHYSREAEHLFQALESTYQKALQSHL
KSSDSVVSLPQSDRSSSSSQESLNRPLSVKSAIGGSMTRGKMVSSRVNSNSGGSLQRSRS
DIDVNAAASAKSRLITVPSASPFSSAAALPPGSYASLDGTPGKIDTGRVRTRRTSSGNAV
GASATVTDSRGRSRAKMMSQSQRSRSANPTGGGKARTSSNQTGSRSSSPGKLLGHSSGYG
RISRPPATSSTPADKRSKVPRSQGCSRDSSPNRLGLARSRIPRPSMSQGCSRDTSRESSR
DTSPARGFKPLASRRTSRSTSALSTADPHSQSDRFGLIHQARISASVNAMRVLNTGTEVE
AAVADALLLGDSRNKRKPMRRRYESPGIYSDDDANSDASSACSERSYGSRNGGIPHYLRQ
TEDVAEVLNHCASSNWSERKEGLLGLQNLLKSQRILSRVELKRLCEIFTRMFADPHSKVF
SMFLETLVDFILVHREDLQDWLFVLLTQLLKKMGADLLGSVQAKVQKALDITRESFPFDQ
QFNILMRFIVDQTQTPNLKVKVAILKYIESLGRQMDPTDFVNSSETRLAVSRIITWTTEP
KSSDVRKAAQVVLISLFELNTPEFTMLLGALPKTFQDGATKLLHNHLKNSSNTSSVSSPS
NTIGRTPPRHTPSRTSPLTSPTNCSHGGLSPSRLWGGCWSGDGLSKHPPPPHPPPPPSTP
SGPALRVLRRAYSPSMLEYDTENMNSDEIYSSLRGVTEAIQSFSYRSQEDLNEPRGKRDD
AVGREGVASSPGSDARLGLDVVEGGRTALDNKTSLLNTPSPRSFSGPRAREFAPYGYGDT
ITSSYDKSALKEAVFDDDVEQFRDCRRQDGSGENKMVLPKGFAPGSQDHSDLVADLLKEL
SNHNERVDERKGALVELLKITREDSLAVWDEHFKTILLLLLETLGDKDHTIRALALRVLK
EILRNQPARFKNYAELTIMKTLEAHKDSHKEVVRAAEEAASTLAGSIHPEQCIKVLCPIV
QTADYPINLAAIKMQTKVIERITKESLHQLLPDIIPGLLQGYDNTESSVRKASVFCLVAI
YSVIGEELKPHLQLLTGSKMKLLNLYIKRAQTTNSNSSSSSDVSSHS
NT seq
4824 nt
NT seq
+upstream
nt +downstream
nt
atggaggtcaatatggagtattgtcttgcccaggtggtgcagaaagacctagggcggaag
gtgcaggtgggacaggagctcatagattacatcgtggataaggagaagtcccaggacctg
gagcaagaccagacagctctggacaggatggtggatggcatcgctaccacctgggtcaac
tcctccaatttcaaggtggctttgctaggtatagaccttttatctgccttagtgacaagg
ttacaggaccgatttaggaaccatgtgggaacagtactggccagtctgatagatcgtctg
ggtgattccaaagaccaagtcagagaccaagatcaaatcctgctgctgaaaatcatggag
caggctgcctccccacagtatgtttgggacagaatgctgggaggcttcaaacacaagaac
aacaggaccagagagggagtgtgcctttgtctcatctcaactctcaacatgtacggagcc
caaggcctaaccctcagtaaaatagtccctcacatatgtaatcttctaggagatcccacc
agtcaggtgagagacgcagctatgggctgcctggtggagatctacagacacgtgggggag
agggtgaggatggaccttagcaagaagggcctaccacagtcacggttgaatgtaatcttc
agcagatttgatgaagtccaaagatctgggaacatgatcccatcctcaggttcagataag
aactttgatgatgaggactctgtggatgggggtcggtcctcctcctctgcatcgtcctgc
aaggcgccccccagtggtaggagggctgtagctgcggtttctgtccgcaggcccagctct
gccaccggacccggcaagatctctgctaaagatgctgctgcaggtgctgttgatgaggag
gacttcatcaaggcttttgaagaggttcctactatccagatccactccaacagagaaatg
gaggacaatctctccaaggttcgggaggttctatctgatgacaaaaacgactgggagcac
agagttgttgccctgaagaaggtgcgttctctgctcctggctggagctctggagtatgat
agtttccctcagcagctccgtctgctggaggcccctctgaagctgtcagctaaagacctg
aggtcccaggtggtacgagaggcctgcatcacactgggatacctgtccatgttgctgggc
aacaagtttgaccactgtgcagagaccctgatgcccacactgctcaacctggtgcccaac
agtgccaaggtgatggccacgtctggcatggcagccatacgtctcatcctcaggcacaca
cactactcacgtctcatccccatcatcactagtaactgcacgtccaaatcagtggccgtc
agaaggcgcagttatgagttcttagagctgttattactggagtggcagacacacacactg
gagaggcacgtggctgttctgactgaaaccatcaagaaagggatccatgatgctgactca
gaggccagatcggtcgcgagaaagtgttattggggtttccatggccactacagccgggag
gcggagcatctgttccaggccctggagtcaacctatcagaaggctctgcagtctcacctg
aagagttctgacagtgtcgtgtctctcccccaatcagaccgctcatcctcctcctcacag
gagagcctcaaccggcccctgtctgtcaagagtgccataggaggcagcatgacaaggggt
aagatggtgagttccagggtgaactccaactccggcggttctcttcagcgttcccgtagt
gatatcgacgtgaacgccgcggccagcgccaagtcacgcctgatcaccgtgccctccgct
tctcccttcagctcagcagctgcccttcccccaggctcctacgcctcactagatggcaca
cctggtaaaattgatactggccgtgtgcgtacgaggagaacaagctccggcaatgccgtc
ggagccagcgctactgtgactgacagcagggggcgcagccgagccaaaatgatgtcccag
tcccagcgatccagatctgctaaccccactgggggtggtaaggcccgaacttcatccaat
cagactggcagtcgctccagttcccctggcaagctgctgggccactcgtctgggtacggg
aggatcagcaggccccccgcaacctccagcactccagcagacaagaggagcaaggtcccc
cgcagccagggctgcagtagagattcctcgcctaacagactgggcctagcaaggagccgt
ataccccggcccagcatgagtcagggctgcagcagggacacatctagggaaagcagccga
gacaccagccctgctcggggcttcaagcctcttgcctcccgacgtacctcccgctctacc
agcgccttatccacggctgacccccacagccagtcagaccgatttggtttgatccaccag
gcccgcatttctgcctcggtgaacgccatgagagtcctcaacactggcactgaggtggag
gctgctgtggctgacgcactgctattaggagactccagaaataagcggaagcctatgagg
cggcgctatgagtctcctggtatctattctgacgatgacgctaacagtgatgcgtccagc
gcctgctcggaacggtcgtacggctcccgaaacggaggtatccctcactacctgcgtcag
acagaggatgtggcagaggtactcaaccactgtgccagctccaactggtctgagaggaag
gagggactgctgggactgcagaacctgctgaagagtcaaagaatactcagccgggtggag
ctgaagagactctgtgaaatcttcaccagaatgtttgcagatccacacagcaaggtgttc
agtatgtttctagagactctggtagactttatcctggtgcacagagaggacctgcaggac
tggctgtttgtcctgctcacccagctactgaagaagatgggtgctgacctgctggggtct
gtccaggccaaggttcagaaggctctggacatcaccagggagtcttttccgtttgatcag
cagtttaacatcctgatgaggttcattgtggatcagacacagacacccaacctcaaggtg
aaggtggccatcctgaagtacatagagtcactgggaagacagatggatcctacagacttt
gtcaactccagtgaaacgcgactagctgtatctcgcatcattacgtggaccacagaaccc
aagagctctgacgtcaggaaggcggcacaggtggtgctgatctctctgtttgagctgaac
accccggagttcaccatgctgctgggagccctgcccaagaccttccaggacggggccacc
aagctgctccacaaccacctcaagaactccagcaacaccagcagcgtgagttctcccagc
aacactattgggcggaccccaccccgccacacccccagccggaccagccccctcacctct
ccgaccaactgctcccacggtgggctgtctccgagtcggttgtggggtgggtgttggagt
ggcgatgggctgtctaagcacccccctccccctcatcctcctccgcctccctccaccccc
tctggccccgccctcagggtcctccgcagagcgtactctcccagtatgttggagtatgac
acagagaacatgaactctgatgagatctacagctccctgcgaggggtcacagaggccatc
cagagtttcagctatcgcagccaggaggacctcaacgaaccaagagggaagagggacgat
gctgtggggcgtgaaggtgtggcgtcctccccaggctcagatgcccgtttggggctggat
gtggtggagggtgggcgcacggccttggataacaagacctccctcctcaacactccgtct
ccccgctccttctccgggccgcgggccagggagttcgctccctacgggtatggggacacc
atcacctcatcctacgacaagagtgccctaaaggaggccgtgtttgacgatgacgtggaa
cagttcagagactgtcgtcggcaggacggcagtggtgaaaacaagatggtgctgcctaag
ggctttgctcctggctcccaggaccactcagaccttgtggcagatcttctgaaggagctg
tccaatcacaatgagcgtgtggatgagcgtaagggggccttggtggagctgctgaagatc
acacgagaggacagcctggccgtgtgggacgaacacttcaagaccatcctcctactgctt
ctggagacactgggggataaagaccacaccattcgggccctggctctgcgggtactgaag
gagatcctgagaaaccaaccggcccgcttcaagaactatgctgaactcaccatcatgaag
accctggaggcacacaaagactcccacaaggaggtggtgcgggcagcggaggaggctgcc
tccaccctagccggctccatccacccagagcagtgtatcaaggtgctgtgtcctatcgtc
cagacggctgactaccccatcaacctggctgccatcaagatgcagaccaaggtgatagaa
cgcatcaccaaggagtccctccaccagctgctgcctgatatcataccaggactactgcag
ggctatgacaacacagagagtagtgttcgcaaggccagtgtgttctgtctggtggccatc
tactccgtgattggagaagagctcaaaccacacctgcagctactcacaggcagcaagatg
aagctgctgaatttgtacatcaagagggcccagacgaccaacagcaacagcagcagttcc
tcggatgtgtcctcacacagctag
DBGET
integrated database retrieval system
