Salvelinus fontinalis (brook trout): 129821122
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Entry
129821122 CDS
T11136
Name
(RefSeq) gamma-aminobutyric acid receptor subunit gamma-2 isoform X1
KO
K05186
gamma-aminobutyric acid receptor subunit gamma
Organism
sfon Salvelinus fontinalis (brook trout)
Pathway
sfon04080
Neuroactive ligand-receptor interaction
sfon04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
129821122
04082 Neuroactive ligand signaling
129821122
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
sfon04040
]
129821122
Ion channels [BR:
sfon04040
]
Ligand-gated channels
GABA-A
129821122
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Motif
Pfam:
Neur_chan_memb
Neur_chan_LBD
PH_24
Motif
Other DBs
NCBI-GeneID:
129821122
NCBI-ProteinID:
XP_055734420
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Position
2:53621854..53682024
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AA seq
477 aa
AA seq
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MVIMAPTNLASKCSTAMANASFPVKLFLWVFLFVNLPTSSMQTENDDDEVTNKTWVLTPK
VYESDVTNILNSLLDGYDNKLRPDIGVKPTVIHTDMFVNSIGPVNAINMEYTIDIFFAQT
WYDRRLKFNSTMKVLRLNSNMVGKIWIPDTFFRNSKKADAHWITTPNRMLRIWNDGRILY
TLRLTIDAECQLKLNNFPMDEHSCPLEFSSYGYPREEIVYKWKRSSVEVGDIRSWRLYQF
SFVGLRNTSEIVRTVSGDYVVLTVFFDLSRRMGYFTIQTYIPCTLIVVLSWVSFWINKDA
VPARTSLGITTVLTMTTLSTIARKSLPKVSYVTAMDLFVSVCFIFVFAALIEYGTLHYFV
SNRKPSTKKDKKNKNPLLRLFSSKQTPTVDIRPRSATAIQMNNATHMQERDEEYGYECLD
GKDCTSFFCCFEDCRSGAWRHGRLHIRVAKIDSYARIGFPTAFGLFNLVYWISYLYL
NT seq
1434 nt
NT seq
+upstream
nt +downstream
nt
atggtgataatggctcctacaaatttagcatctaaatgctcgacagcgatggcgaatgct
tccttccccgtgaagctatttctctgggtgtttttattcgttaatcttcctacaagctcc
atgcagactgaaaacgacgatgatgaagtgactaacaaaacttgggtgttgactcccaaa
gtgtacgagagcgatgtcaccaacatcctaaacagcctactagatggctacgataacaaa
ctgcgaccagatataggagtcaaaccaaccgtgatccacacggacatgtttgtcaacagt
atcggcccagtaaatgctatcaatatggagtacaccatcgacatcttttttgcccagacg
tggtatgaccggagattgaagttcaacagtaccatgaaggtcctgcgtctcaacagcaac
atggtgggcaagatctggatccccgacaccttctttcgcaactccaagaaggccgatgcc
cactggatcaccacgcccaatcgcatgcttcggatctggaacgatggacggatactctac
acactgcggttgactattgatgccgagtgccagcttaaactgaacaactttccaatggat
gagcactcctgtcccctggagttttcaagctatggctaccccagagaggagatagtgtac
aagtggaagaggagctccgtggaggtgggagacatccgctcctggaggctctaccagttc
tcctttgttggcctgaggaacacctccgagatcgtcaggaccgtgtcaggagactacgtt
gttctgacagtcttctttgacctgagcaggaggatgggttacttcaccattcagacctac
atcccctgcaccctcatcgttgtcctctcctgggtctccttttggatcaacaaggatgct
gtacctgctagaacatccttaggcattaccactgtgctgaccatgactacgctgagtacc
atagccaggaagtcgctgcctaaggtatcctacgtgacggccatggacctctttgtgtcc
gtgtgcttcatctttgttttcgccgctctgatagagtatggaacactgcactactttgtg
agcaacaggaagccaagcacaaaaaaggacaagaaaaataaaaacccgctcctccggctc
ttttcctcaaagcagacacctacggtggacattcgccctcgctcagccaccgccatccag
atgaacaacgccacccacatgcaggagcgggatgaggagtatggctacgagtgcctagac
ggcaaggactgcaccagcttcttctgctgtttcgaggactgccgctccggggcctggcgg
catgggcggttgcatatccgtgtcgccaagatagactcgtacgctcgcatcggtttcccc
accgctttcggtctctttaacctggtttactggatctcctatctctatctctag
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