Salvelinus fontinalis (brook trout): 129821134
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Entry
129821134 CDS
T11136
Name
(RefSeq) 60 kDa heat shock protein, mitochondrial
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
sfon Salvelinus fontinalis (brook trout)
Pathway
sfon03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
129821134
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sfon03019
]
129821134
03110 Chaperones and folding catalysts [BR:
sfon03110
]
129821134
03029 Mitochondrial biogenesis [BR:
sfon03029
]
129821134
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sfon04147
]
129821134
Enzymes [BR:
sfon01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
129821134
Messenger RNA biogenesis [BR:
sfon03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
129821134
Chaperones and folding catalysts [BR:
sfon03110
]
Heat shock proteins
HSP60 / Chaperonin
129821134
Mitochondrial biogenesis [BR:
sfon03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
129821134
Exosome [BR:
sfon04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
129821134
Exosomal proteins of other body fluids (saliva and urine)
129821134
Exosomal proteins of breast cancer cells
129821134
Exosomal proteins of colorectal cancer cells
129821134
Exosomal proteins of bladder cancer cells
129821134
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Gag_p15
Motif
Other DBs
NCBI-GeneID:
129821134
NCBI-ProteinID:
XP_055734445
LinkDB
All DBs
Position
23:complement(31697137..31705317)
Genome browser
AA seq
576 aa
AA seq
DB search
MLRLPTVMRQMRPVSRALAPHLTRTYAKDVKFGADARAMMLKGVDLLADAVAVTMGPKGR
TVIIEQSWGSPKVTKDGVTVAKAIDLKCKYQNIGAKLVQDVANNTNEEAGDGTTTATVLA
RAIAKEGFDSISKGANPVEIRRGVMLAVETVINELKRMSKPVTTPEEIAQVATISANGDV
EIGTIISNAMKKVGRKGVITVKDGKTLYDELEIIEGLKFDRGYISPYFINTAKGQKCEFQ
DAYVLLSEKKISSVQSIVPALELANQHRKPLVIVAEDVDGEALSTLVLNRLKVGLQVVAV
KAPGFGDNRKAQLHDMAVATGGTVFGDEAVGIALEDIQAHDFGKVGEVSVTKDDTMLLKG
KGDTAAIEKRQAEIVEQLENTTSDYEKEKLNERLAKLSDGVAVLKVGGTSDVEVNEKKDR
VTDALNATRAAVEEGIVPGGGCALLRSIPALDALVPINTDQKIGIDIIRRALRVPAMTIA
KNAGVEGSLVVEKILQAAGEIGYDAMEGEYVNMVEKGIIDPTKVVRTALMDAAGVASLLS
TAECVVTELPKDEKEAGMPGGMGGMGGMGGMGGGMF
NT seq
1731 nt
NT seq
+upstream
nt +downstream
nt
atgttgcgtctacccacagtgatgagacagatgaggccagtcagcagggccctggccccc
cacctcacccggacttacgccaaggacgtcaagtttggagccgatgctcgggccatgatg
ctgaagggagtggatctgctggctgatgctgtcgccgtcaccatgggacccaagggtcgc
acagttatcatcgagcagagctggggcagccccaaggtgaccaaggacggcgtcactgta
gccaaggccatcgacctgaagtgcaagtaccagaacattggtgccaagctggtccaggac
gtggccaacaacacgaacgaggaagcgggagatggcaccaccactgccaccgtgctggcc
agagccatcgccaaggagggctttgacagcatcagtaaaggagctaaccctgtggagatc
cgccgtggcgtcatgctggctgtggagaccgtcatcaacgagctgaagaggatgtccaag
ccagtcaccacccctgaggagattgcccaggtggccaccatttctgctaatggagacgtg
gagatcggcaccatcatctccaacgccatgaagaaagtgggccgcaagggagtcatcact
gtcaaggatggcaaaaccctttatgatgagcttgagatcattgaggggctgaagttcgac
cgcggatacatctccccttacttcatcaacacagccaaaggccagaagtgtgagttccag
gatgcctatgtgttgctgagtgagaagaaaatctcttctgtccagagcatcgtccctgcc
ctggaattggccaaccagcaccgcaaacctctggtcatcgtggccgaggatgtggacgga
gaggccctcagcaccctggtcctcaacaggctgaaggtgggactgcaagtggtggcagtc
aaggccccaggctttggagacaacaggaaagcccagctgcatgacatggccgttgccacc
gggggcactgtgtttggtgatgaggcggtgggcattgccctagaggacatccaggcccat
gactttggtaaggttggcgaggtgtctgtcaccaaggacgacaccatgctgctgaagggg
aagggagacactgcggccatcgagaagcgccaggcagagatcgttgagcagctggagaac
accactagcgactacgagaaggagaagctcaacgagaggctggccaagctgtctgacgga
gtggctgtgctcaaggtaggaggaacgagtgatgtggaggtgaatgagaagaaggaccgt
gtgaccgacgccctgaatgccaccagggctgctgtggaggagggaatcgtgcccggaggt
ggctgtgccctgctgcgctccatccctgccctggatgccctcgtgcccattaacacagac
cagaagattggaattgacatcatcagacgagccctgcgtgtgccagccatgaccattgcg
aagaacgctggtgtggagggctctctagtggtggagaagatccttcaggccgcgggggag
ataggatacgatgccatggagggagagtacgtcaacatggtagagaagggcatcatcgac
cccaccaaggtggtaagaacggcactgatggatgctgcaggtgttgcttctctgctctcc
accgccgagtgtgtggtcacagaactgcccaaggatgaaaaggaggctggcatgccaggg
ggcatgggtggtatgggaggtatgggtggcatgggaggtggcatgttctaa
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