Salvelinus fontinalis (brook trout): 129821275
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Entry
129821275 CDS
T11136
Symbol
dync1i2a
Name
(RefSeq) dynein, cytoplasmic 1, intermediate chain 2a isoform X1
KO
K10415
dynein cytoplasmic 1 intermediate chain
Organism
sfon Salvelinus fontinalis (brook trout)
Pathway
sfon04145
Phagosome
sfon04814
Motor proteins
sfon05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
129821275 (dync1i2a)
09142 Cell motility
04814 Motor proteins
129821275 (dync1i2a)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
129821275 (dync1i2a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sfon03036
]
129821275 (dync1i2a)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
sfon04812
]
129821275 (dync1i2a)
Chromosome and associated proteins [BR:
sfon03036
]
Eukaryotic type
Centromeric chromatin formation proteins
SAC (spindle assembly checkpoint) factors
Motor proteins
Dynein complex
129821275 (dync1i2a)
Cytoskeleton proteins [BR:
sfon04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Dyneins
129821275 (dync1i2a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40
WD40_Prp19
Beta-prop_EML
WDR55
Dynein_IC2
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_RIG_2nd
Beta-prop_WDR19_1st
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_HPS5
Beta-prop_IFT140_1st
Beta-prop_TEP1_C
Beta-prop_WDR90_POC16_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_EIPR1
WD40_MABP1-WDR62_2nd
Beta-prop_NUP159_NUP214
ANAPC4_WD40
Beta-prop_SPT8
WD40_RFWD3
Beta-prop_IP5PC_F
Beta-prop_DCAF4
Motif
Other DBs
NCBI-GeneID:
129821275
NCBI-ProteinID:
XP_055734728
LinkDB
All DBs
Position
23:complement(38398783..38420600)
Genome browser
AA seq
628 aa
AA seq
DB search
MSDKSELKAELERKKQRLAQIREEKKRKEDERKKKEADPKKDAAPLDDSDLEKKRRETDA
LLQSMGITSADVPVVPPPMSPTCKSVGTPSEAGSQDSGDGAVGPRTLHWDSDPSTLQLHS
DSDLRRGPLKMGMAKITHVDFPPKEMVSYTKETQTPVMTQQKEEEEEEEEVAPPQLVPEA
RTEKPVQKEEEEAPPQELTEEEKLQILHSEQFITFFDHSTRIVERALSEHVDVFFDYSGR
EMEEKEGEIQAGTKLFLNRQFMDERWSKHRVVTCLDWSAQYPELLVASYNNNEEAPHEPD
GVALVWNMKYKKNTPEYVFHCQSAVMSAAFAKFHPNLVVGGTYSGQIVLWDNRSNKRTPI
QRTPLSAAAHTHPVYCVNVLGTQNANNLISISTDGKMCSWSLDMLSQPQDSLELVLKQSK
AVAVTSMSFPLGDVNNFAVGSEDGSVYMACRHGSKAGISEMFEGHHGPITGIDCHTATGP
IDFSHLFVTSSFDWTVKLWSTKNNKPLYSFEDNSDYVYDVMWSPTHPALFACVDGVGHLD
LWNLNNDTEVPTASTTVEGNPALNRVRWAHSGKEIAVGDSDGQILVYDVGEQIAVPRNDE
WTRFVRTLAEINENRDDAEELAAQRLSA
NT seq
1887 nt
NT seq
+upstream
nt +downstream
nt
atgtcagacaaaagcgagctaaaagcggagcttgaaaggaagaagcaacgcctggctcag
atcagggaggagaaaaaaaggaaggaagatgagcgcaaaaagaaagaggctgacccgaag
aaagatgccgccccactggatgactcggacttggagaaaaagagacgtgagacagatgcc
cttctgcagagcatgggcatcacgtcagctgatgttcctgttgtccctcctcccatgtct
ccaacctgcaaatccgtgggcacaccaagcgaggcagggagccaagactcaggcgatggc
gccgtgggacccaggactctccactgggactctgacccgtccactcttcagcttcactct
gactctgacctgcggcgtggacctctgaagatgggcatggccaagatcacccatgttgac
ttccctccaaaagagatggtgtcgtacaccaaggagacccagacacctgtgatgacccag
cagaaagaagaggaagaagaagaggaggaagttgctccaccacaactagtgcctgaggcc
cgaacagagaaacctgtccagaaagaggaggaggaagcacctccacaagagctgaccgag
gaggagaagctgcagatcctccactctgagcagttcataaccttctttgaccacagcacc
cgcatcgtggagcgggccctgtccgaacatgtggacgtcttcttcgactacagtggtcgc
gagatggaggagaaggagggtgagatccaggcggggaccaagctgtttctgaacaggcag
tttatggacgagcgctggtccaagcaccgtgtggtcacctgtctggactggtccgctcag
tatcctgagctgctggttgcctcatacaacaacaacgaggaagccccccacgagccggac
ggggtggccctggtctggaacatgaagtacaagaagaacacgccggagtacgtcttccac
tgccagtctgcagtgatgtcggccgcctttgccaagttccaccctaacctggtggtgggg
ggcacctactcagggcagatcgttctgtgggacaaccggagcaacaagaggacccccata
cagaggacccccctgtcagcagcagcacacacgcacccagtgtactgtgtgaacgtgctg
ggcacccagaacgccaacaacctcatcagcatctctaccgacggcaagatgtgttcctgg
agcctggacatgctgtctcagccgcaggacagcctggagctggtgttgaagcagtcgaag
gccgtcgctgtcacctccatgtctttccccctcggagatgtcaacaactttgcggtgggg
agcgaggacggttccgtctacatggcgtgtcgtcatggaagtaaagcagggatcagtgag
atgtttgagggccaccacgggcctatcacagggatagactgtcacacagcgaccgggccc
atcgacttttcccacctgtttgtcacctcctccttcgactggaccgtcaagctgtggagc
actaagaacaacaagccgctgtactcgttcgaggacaactcggattacgtctacgacgtc
atgtggtcccccactcacccggcgctgtttgcgtgtgtggatggagtgggccatcttgac
ctgtggaacctgaacaacgacactgaggttcctactgccagtaccacagtggaggggaac
ccagccctgaaccgcgtgcgatgggcccattccggcaaagagattgccgtgggagactct
gatggacagattctggtctatgatgttggagagcaaatcgctgttccacgcaacgacgag
tggacccgtttcgtccgaaccctggcggagatcaacgagaaccgggacgacgcagaggag
ctggccgctcagcgcctctctgcctga
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