Salvelinus fontinalis (brook trout): 129821377
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Entry
129821377 CDS
T11136
Name
(RefSeq) integrin beta-2-like
KO
K06464
integrin beta 2
Organism
sfon Salvelinus fontinalis (brook trout)
Pathway
sfon04145
Phagosome
sfon04514
Cell adhesion molecules
sfon04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
129821377
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
129821377
09142 Cell motility
04810 Regulation of actin cytoskeleton
129821377
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sfon04131
]
129821377
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sfon04147
]
129821377
04515 Cell adhesion molecules [BR:
sfon04515
]
129821377
04090 CD molecules [BR:
sfon04090
]
129821377
Membrane trafficking [BR:
sfon04131
]
Endocytosis
Phagocytosis
Integrins (complement receptors)
129821377
Exosome [BR:
sfon04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
129821377
Cell adhesion molecules [BR:
sfon04515
]
Integrins
Integrin beta subunits
129821377
CD molecules [BR:
sfon04090
]
Proteins
129821377
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Integrin_beta
Integrin_B_tail
Integrin_b_cyt
PSI_integrin
EGF_integrin
vWA_SIBA-E
EGF_2
EGF_Teneurin
I-EGF_1
Motif
Other DBs
NCBI-GeneID:
129821377
NCBI-ProteinID:
XP_055734965
LinkDB
All DBs
Position
23:complement(42946250..42977602)
Genome browser
AA seq
775 aa
AA seq
DB search
MYTCVSLLLLLMGRGVLSQEVEVCSKTVINSCSDCIRSGAYCTWCKQLNFTKPGEQEAAR
CDTRAQLEERGCKEIISPQNTLTVTKNTALSTDAFVKDEPIQLRPQEVNLKLRPGLPRTF
KLDFRRVEGYPVDLYYLMDLSYSMEDDLRSIKTLGNELFKALQGITKQGRIGFGSFVDKT
VLPFTNTNPEKLKKPCAEKEQFCQPAFGYRHVLSMTENEADFKKEVDKQRISGNLDSPEG
TLDAIMQAAVCGDRIGWRNSSTRLIVLTTDDGFHMAGDGKLAGILEPNDERCYMDNKLYT
KSNDMDYPSVGQVATQLEKNNIQPIFAVTKNMEKVYRELSRMIPKSEVGVLSEDSKNVVE
LIQAAYNRLSSKVTVTHDALPDNVRVTYTPLCPGGGPAGDKGVCDNVKVGDLVSFNVTVT
ADECIDREMSFLIGPLGIKDKLKVSLSTRCECECDDPKEEEHKDCDRKGKVNCGMCSCKA
GFVGQRCECSIGEKDESSLRAACRKDNGTECEGRGDCVCGICQCYALQGGSTYYGTHCEC
ENESCEKFQNKLCGGNGKCRCKNCECNPGYEGTACQCKKSDEQCRTPSGSVCSGRGTCQC
NQCKCIEGYQRPFCLTCPACQTPCITKGKCIECLGFQTGPFSKNCSQTCKSINEFEMVET
LPPGKPCDVRDVESCRVFFTIKQLDGEDNYSAQILKTRECPELPNIYAIIGGSIAAVALI
GLVILLIIKGLFHLKDVKEFRRFENEQKKGKWMPGDNPLFMNATTTVANPTFTGE
NT seq
2328 nt
NT seq
+upstream
nt +downstream
nt
atgtatacgtgtgtgtctctcctgctcctgctgatgggcagaggtgttctctcccaggaa
gtggaagtatgttctaaaacggtgatcaactcctgcagcgactgcatcagatcaggagcg
tactgcacgtggtgcaaacaactgaacttcaccaagccaggtgagcaagaagcagctcgc
tgtgacacccgggctcagctagaagagaggggctgcaaggaaatcatatcccctcagaat
acccttactgtgactaagaacaccgccctgtccaccgatgcatttgtcaaggacgaaccc
atccagctgcgtcctcaggaggtcaatctgaagctcagaccagggctgcctcggacgttc
aagctggacttccggagagtggagggctatcctgttgatctctactacctgatggatctc
tcctactccatggaggacgatctgaggagcatcaagactctgggaaacgagctctttaaa
gctctgcaaggcatcacaaaacaagggcgaataggcttcggctctttcgtagacaagact
gtcctgcctttcactaacaccaacccagagaagctgaagaagccatgcgccgaaaaggag
cagttctgtcaacctgcctttggctacaggcatgttcttagcatgacagagaacgaagct
gactttaaaaaggaggtagacaagcagcgcatctctgggaacttggactcccctgaaggg
acgctggacgccatcatgcaggctgcagtatgtggggacaggattggctggaggaatagt
agcactcggctaatcgtcctgaccaccgatgatggcttccacatggcaggggatggcaag
ctggctggcatactggagcccaacgacgagagatgttacatggacaacaagctgtacact
aagagcaatgacatggactatccatctgttggtcaagtggctacacagttagagaagaac
aacattcaaccaatctttgctgtgacgaagaacatggagaaggtatacagggaactcagt
agaatgatccccaagtctgaggtgggagtattgtcagaggactccaaaaatgttgttgaa
ttgatccaagctgcctacaataggctctcctccaaagtgacggtgactcatgatgctctc
cctgacaatgtgagagtcacttacactccactctgtcctggagggggacccgcgggggac
aagggggtctgtgataacgtcaaagtaggagatttggtgtctttcaacgtaacagtgacg
gcagatgaatgtatagacagggagatgtcttttctgattggcccattgggcataaaagac
aagctgaaggtgagcttgtcgactcgctgcgagtgtgaatgtgatgaccccaaggaggag
gaacacaaggactgcgacaggaagggcaaagtcaactgtggcatgtgcagttgcaaagcc
ggcttcgtgggtcagaggtgcgagtgctccattggggagaaggacgagagctctctgagg
gcggcatgccggaaggacaacggcacggagtgcgaaggacgaggggactgtgtgtgtggc
atttgccagtgctatgccctacaaggcggcagcacctactacggcacgcactgcgagtgt
gaaaacgagagctgcgagaagtttcagaacaaactgtgtggagggaacgggaaatgccgc
tgtaaaaattgcgaatgcaaccccgggtacgaaggcaccgcctgccaatgcaagaagtcg
gacgagcagtgtcgcacaccaagcgggagtgtgtgcagcggcaggggcacatgccagtgt
aaccagtgcaagtgtatcgagggctaccagcggcccttctgtctgacctgtcccgcctgc
cagactccctgtataaccaaggggaagtgcatcgagtgtctgggctttcagacaggcccg
ttcagtaagaactgctcccagacctgtaagagcattaatgaatttgagatggtggagaca
ttgccacctggtaagccttgtgacgtgagggatgtggagagctgccgggtgttctttacc
attaaacagttggatggagaggacaactactccgcccagatactaaagaccagagagtgt
ccggagttgccaaacatctacgccatcattggaggctccattgcggccgtggccctgatc
ggcttagtgatcctgctcatcatcaaaggactcttccacttgaaagacgtgaaggagttc
cgcaggtttgagaatgagcagaagaaaggaaagtggatgccgggagacaatccactattc
atgaacgcgaccaccaccgtggctaaccccaccttcactggagaatag
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