Salvelinus fontinalis (brook trout): 129821386
Help
Entry
129821386 CDS
T11136
Name
(RefSeq) ATP-dependent RNA helicase DDX18-like
KO
K13179
ATP-dependent RNA helicase DDX18/HAS1 [EC:
5.6.2.7
]
Organism
sfon Salvelinus fontinalis (brook trout)
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sfon03041
]
129821386
03009 Ribosome biogenesis [BR:
sfon03009
]
129821386
Enzymes [BR:
sfon01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
129821386
Spliceosome [BR:
sfon03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
129821386
Ribosome biogenesis [BR:
sfon03009
]
Eukaryotic type
90S particles
Helicases
129821386
Pre-60S particles
129821386
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
CTE_SPB4
ResIII
AAA_22
Motif
Other DBs
NCBI-GeneID:
129821386
NCBI-ProteinID:
XP_055734989
LinkDB
All DBs
Position
23:complement(44027524..44039088)
Genome browser
AA seq
679 aa
AA seq
DB search
MADLQMRLLRQKIQKRSEKNKERKLLKKQKQEEDNDDANRLPEERCDETSHGATAISKSQ
NAKSTKKPQIQKNVSAKVDTEKKSVKMKRKLKTADLPGVKKAKKDEADDDEDEDMEEERG
LTVTGEDADQGTDKPTQPLEGTVTGEEEDEEGSEDGGEGEKLGDDEEEEDGPELPTGLTG
AFEDTSFASLASLVSENTLKAVKEMGFDHMTEIQHKSIRPLLEGRDILAAAKTGSGKTLA
FLIPSIELIYKLKFMPRNGTGVVILSPTRELAMQTYGVMKELMTHHVHTFGLIMGGSNRT
AEAQRLANGVNIIVATPGRLLDHLQNTAGFMYKNLQCLIIDEADRILEVGFEEELKQIIK
LLPKRRQTMLFSATQTRKVEDLARISLKKEPLYVGVDDNKDNATVDGLEQGYVVCPSEKR
FMLLFTFLKKNRKKKLMVFFSSCMSVKFHYELLNYIDLPVMAIHGKQKQTKRTTTFFQFC
NADSGILLCTDVAARGLDIPEVDWIVQYDPPDDPKEYIHRVGRTARGINGIGHALLILRP
EELGFLRFLKQAKVPLSEFEFSWAKISDIQGQLEKLIEKNYYLHKSAQEAYKSYVRAYDS
HSLKAIYSVNTLNLPMVALSFGFKVAPYVDLNVHSKGGLKMTKRGGGGGFGYQKGKPAHK
AKIFKHVNKGKGDKRQFSR
NT seq
2040 nt
NT seq
+upstream
nt +downstream
nt
atggcagatcttcagatgaggcttcttcggcagaaaatccagaaaagaagcgaaaagaac
aaagagcgaaaactactcaagaaacagaaacaagaggaagataatgatgacgcgaacaga
cttccagaggagcgttgtgatgaaacgagtcatggggccacagcaatttcaaagtcgcag
aatgccaaatccacaaagaagccacaaatacagaagaatgtgtctgcaaaggtggacaca
gaaaaaaaatctgtcaagatgaaaaggaagctcaaaactgctgatttgccaggtgtgaaa
aaagccaagaaggacgaggcagatgatgatgaggatgaggatatggaggaggagaggggg
ttgactgtgactggggaggatgctgatcagggcacagacaaacccacacagcctcttgaa
gggacagtgactggagaggaggaggatgaagagggaagtgaagatgggggggaaggagag
aagcttggggatgatgaggaggaggaagatggaccagagctcccaactggcttgacaggt
gcgtttgaggacacatcgtttgcctctttagcctctctggtgagtgagaacactctgaag
gctgtgaaggagatgggctttgaccacatgaccgagatccaacacaaaagcatccgcccc
ctactggagggaagagatatcctggctgctgcgaagactggcagtggtaaaaccctggcc
ttcctcatcccctccatcgagctcatctacaaactcaaattcatgcccaggaacggtacg
ggcgtggtgatcctgtccccaacgcgcgagttggccatgcagacgtatggcgtgatgaaa
gagctgatgacccaccacgtgcacacctttggcctgatcatgggcggcagcaaccgcacg
gccgaggcccagaggctggccaacggtgtcaacatcatcgtggccacacccggcagactg
ctggaccacctgcagaatactgccggcttcatgtataagaacctccagtgtctaatcatt
gacgaagctgaccgtatcctggaggtcggcttcgaggaggaactgaaacagatcatcaaa
ctcctgccgaagcggaggcagaccatgctgttctcggccacccagacccgtaaggtggag
gacctggcccgtatctccctgaagaaggagcccctctacgtgggcgtggacgacaacaag
gacaacgccaccgtggacggcctggaacagggctacgtggtgtgtccgtctgagaagcgc
ttcatgctgctcttcaccttcctgaagaagaaccgcaagaagaagctgatggtgttcttc
tcctcctgcatgtcggtcaagttccactacgagctgctcaactacatcgacctgcccgtc
atggccatccacgggaagcagaagcagaccaagcgtaccaccaccttcttccagttctgt
aacgccgactctggcatcctgctgtgtacagacgtggcggccagaggcctggacatcccc
gaggtggactggatcgtacagtatgaccccccagatgaccccaaggaatacatccacagg
gtgggcagaacggctcgcgggatcaacggcataggccacgccctcctgatcctaaggcca
gaggagctgggcttcctgcgcttcctcaaacaggccaaggttcctttgagtgagtttgaa
ttctcttgggcgaagatctccgatatccagggtcagttggagaaattgattgagaagaac
tactacctgcacaagtcggcccaggaggcctacaagtcctacgtgcgggcgtacgactct
cattcgctcaaagcgatctacagcgtcaacacgctcaacctccccatggtggcgctctcc
ttcggcttcaaagtggctccctacgtcgacctcaacgtccacagcaaaggaggactgaag
atgacgaagaggggtgggggcggcggcttcggctaccagaagggcaagcccgctcacaaa
gccaagatcttcaagcacgtcaacaaaggcaagggggacaagaggcaattctctcgctag
DBGET
integrated database retrieval system
