Salvelinus fontinalis (brook trout): 129821798
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Entry
129821798 CDS
T11136
Name
(RefSeq) rho guanine nucleotide exchange factor 12-like isoform X1
KO
K07532
Rho guanine nucleotide exchange factor 12
Organism
sfon Salvelinus fontinalis (brook trout)
Pathway
sfon04270
Vascular smooth muscle contraction
sfon04625
C-type lectin receptor signaling pathway
sfon04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
129821798
09150 Organismal Systems
09151 Immune system
04625 C-type lectin receptor signaling pathway
129821798
09153 Circulatory system
04270 Vascular smooth muscle contraction
129821798
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sfon04131
]
129821798
Membrane trafficking [BR:
sfon04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
129821798
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
129821798
NCBI-ProteinID:
XP_055735431
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Position
24:4588290..4662401
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AA seq
1469 aa
AA seq
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MSDTQSSITDRFPNKANRSSSILSKDHPPDKKPKSDKPAVSCSHEFDPTDVLVQKSGCVL
VEGKPESCGLVQRCVIIQKDENGFGLTVSGDNPVFVQLVKEDGAAERAGVQTGDRIIKVN
GTLVTHSNHVEVVKLIKSGSYVALTVLGRPPGLPQIPLSESEAKLGFPGPQAGSSPVTSP
NAPGQPTGERPYSPHDRITSPLWEENNSVHSQKVDILQKMLSKEQQDLQAMKEEYSRNPT
PKLLKDIQEAKKHIPQLQGQLSKATGGAQDALQLGDGDDGSMVDMDHTPSSKGDSSNDLS
WSSSTMSPVLRSFAPASPESLCQRDMLSYHSPKSTPRDSFNSCHSPDPEDTPDLDSLSPS
AVISPSSRFVSQIIGAEDDCFDSDQEQVNGQCSCFQSMELLKSRPAHLAAFLHHVVSQFD
PAPLLCYLFADLCKQTNSKETRRVFMDFHNFFIDRGANLKVAVPESISLDLDRRRTELIP
EELNRQLVQMMQDTLLPDIQRNLEDFRQKRSMGLTLAEGELARLDTERVRDRVALERERS
CAENIITKIEDVLLTTQSTEEEKCTTMQYVILAYMKHLGVKVKEPRGLESKRVRLNFLPK
IKKSVKTEKEGGEEKVKRTRFPSILGPQRRPSRVDPTSIGKAMDLNKPRPQKQLSQPCLG
AVEHLEAGRLTASQSSEGSELTHSSNTNATSPTNSTTNSHASDGGSRDSEFVLTPNSAFL
KLSEGLGDLDSLQYTPNTHFDYSLSPYSLDQLQEEDRESRILEGTPKSIRRLDGLVSTEV
QSEDDQGGTDSEHDPLNWQQLVGREVLAGLRAHEIKRQEVINELFYTERAHLRMLKVLDN
IFYQKLTREAILPPADIKNIFTNLGDIVQLHVLISEQMAAIRKRSETSVIDQIGDDLLSW
FSGGEEEKIKQAVGTFCSNQPFALELIKSRQKKDSRFTSFMQEAESNRLCRRLQLKDIIP
VEMQRLTKYPLLLENIAKYTDDTVEKDKVKKAGDCCRKILNHVNQAVKESENKQRLEDYQ
RRLDLSSLKQTENPMITELKNLDLTKKKMVHEGPLSWKVNKDKTIELYTLLLEDILVLLQ
KQDERLVLKCHSKNLSGTADTKHIFSPIIKLNAVLVRSVATDNKSFFVLSMSDNGAQIYE
LMAQTVSEQRMWQRQITQRADAMKVNPHSGIHLPQTDGERDGVEIIAADVARLGKDPDRI
SSGSSQSIECSAASGGVMQTSLPDANPFVGLKPEEEEPSREEGPYGDPDLADRLPFRMAV
DGLSESDGLGFSPSRADDALKTLSALKQVLVTQLMLQEDGEGAGRSSSRGGRLLRTTSLR
TPVDSRARVAVQKGSGMCTQASHPEDPAQDLVSGDTGFFESPEDYAGYLVLEGYGGSGES
STDDDLQATGKQLSASRGCGAGDSGISLRFSSASQAGSISSFSRQVLSHLRNLQTNLNHL
KEVEAKYHSLLRQRPARSSTDTDINKDKR
NT seq
4410 nt
NT seq
+upstream
nt +downstream
nt
atgagcgacacacagtccagtatcactgataggtttcccaataaagcaaacagaagcagt
agcattctcagtaaagaccacccccctgacaagaaacccaaaagtgataaaccggcagtc
tcctgttcacatgagtttgaccctacagacgttctggtgcagaagagtggctgtgttcta
gtggaggggaagcccgagtcctgtgggcttgtccagcgatgtgtgatcattcagaaagat
gagaatggctttgggctgacggtgagcggagacaacccagtgtttgtgcagctcgtcaag
gaagatggcgctgcggagcgtgcgggtgtacagacaggtgaccggatcatcaaggtgaac
gggaccctagtaacacattcaaaccacgtggaagtagtaaagctcatcaaatcgggctcc
tatgtggccctcacagtgttggggcgaccccctgggttgccccagatccccctgtcggag
agcgaggctaagctggggttcccggggccccaggctgggtcgtcccccgtcacctctcca
aacgctcctggacagccaacgggggagcgcccatacagcccccatgaccgcatcacctct
cctctatgggaagagaacaacagcgtacacagccaaaaggtggacatcctgcagaagatg
ttgtccaaggagcaacaagatttgcaggcaatgaaggaggagtacagcaggaatccgacg
ccaaaactactgaaggacatccaggaagccaagaagcacattccacagctgcaggggcag
ctcagtaaggccactggaggagcacaggatgccctgcaattgggtgacggagatgacggt
agcatggtggacatggaccacacaccttcctccaagggggacagtagcaatgacctctcg
tggagcagcagtaccatgtcccctgttctccgcagttttgcacctgcctccccagagagc
ctgtgccaaagagacatgttgtcctaccacagcccaaagagcacaccccgagacagcttc
aactcctgccactcccccgacccagaagacactccagacctggactcgctgtccccctct
gctgttatcagcccttcctcacgcttcgtctcccagatcatcggagctgaggacgactgc
tttgactctgatcaagaacaggtcaatggccagtgcagctgtttccagagcatggagctg
ctcaagtccagacctgcccacctggcagcgttcctgcatcacgtcgtctcgcagtttgac
cctgcaccgctgctctgctacctcttcgctgacctgtgcaagcaaactaactccaaagaa
accagacgagtgttcatggacttccacaacttcttcatcgaccggggagctaatttaaaa
gtagctgttcccgagtccatctcccttgaccttgaccgacggaggacggagctgatccct
gaggagctgaaccgacagttagtccagatgatgcaggacaccctgctccctgacatccag
aggaacctggaggacttcaggcagaagcgcagtatgggcctaaccctggcggagggggaa
ctggcccggctggacacggagcgcgtcagagaccgggtagcactggagagagaacgctcc
tgtgctgaaaacatcatcaccaagatagaggatgtcctgttgacaacccaatctacagag
gaggagaaatgcactactatgcagtatgtcatcctcgcgtacatgaagcaccttggagtg
aaagtcaaagagccacggggcctagagtccaaaagggtccgccttaacttcctccccaag
atcaagaagagcgtcaagaccgagaaggagggaggggaggagaaggtaaaacgaaccagg
tttcccagcatcctcgggcctcagcgccggcccagccgcgtcgaccccacgtccatcggc
aaggccatggacctcaacaagccgcggccccagaagcagctgtcccagccctgcctgggg
gccgtggagcacctggaggcgggtcgcctaacggccagtcaatccagcgagggctcagag
ctcacacattcctccaataccaacgccacctcgccaaccaacagcaccaccaacagccac
gcctctgacggaggcagcagagactctgagtttgttctgacccctaactctgccttcctc
aaactgagcgagggtcttggagacctggacagtctacagtacactccaaacacacacttt
gactacagcctgagcccatacagcctggaccagctgcaggaggaggacagggagagcaga
atccttgaaggaacacccaagtctatcagaaggttggatggccttgtttctacggaggtg
cagagtgaagacgaccaaggaggcacggactctgagcacgaccccctcaactggcagcag
ctggtgggacgtgaggtcctggctggactcagggcccacgagatcaagagacaggaagtc
attaacgagctgttctacactgagagggcccacctgcggatgctcaaagtgctggacaac
atcttctaccagaagctcaccagagaggccatactgcctcctgccgacatcaagaacatc
ttcaccaacctgggggacattgttcaactgcatgttttgatatctgagcaaatggcagca
atccggaaaaggagcgagacgtccgtaatcgaccaaataggagacgacttgctgtcctgg
ttcagcgggggcgaggaggagaagatcaagcaggcggtgggcacgttctgcagcaaccag
cccttcgctctggagctcatcaagagcaggcagaagaaggactcgcgcttcacctccttc
atgcaggaggctgagagtaaccgactgtgtcgaagactccaactgaaggacatcattcct
gtggagatgcagaggctcaccaagtaccctcttctactggagaacatcgccaagtacaca
gatgacaccgtggagaaagacaaggtaaagaaggcaggcgactgctgcaggaagattctc
aaccacgtcaaccaagcggtgaaggagtctgaaaacaaacaaaggctggaggactaccag
aggcggctagacctctcgtctctgaagcagacggagaaccccatgattacagagctcaag
aacctggacctgaccaagaagaagatggtccacgagggaccactgtcatggaaggtcaac
aaggacaagactattgagctgtacaccctgctcctggaggacatcctggtgctgctgcag
aagcaggacgagcggctcgtcctcaagtgccacagcaaaaacctgtcgggcaccgccgac
accaagcacatcttcagccccatcatcaagctcaatgcggtgctggtgcgctctgtggcc
acagacaacaagtcgttctttgttctctcaatgtcagacaacggggcacagatctacgag
ctgatggcccagaccgtatcagagcagagaatgtggcagcggcagatcacccagagagcg
gacgccatgaaagtgaatccgcacagcggcatccacttacctcaaacggatggagagcga
gacggtgtggagatcatcgctgcagacgtagcccgactcggtaaggacccggaccgcatc
tcctctggaagcagccagtctatagagtgcagcgctgcctctggtggcgtgatgcagacc
tctctcccagatgccaacccctttgtaggactcaagcccgaagaggaggagcccagccgg
gaggaggggccttacggggacccggaccttgcagataggctgcccttccgcatggccgta
gacgggctcagcgaatcggacgggctgggcttcagtccttctagggctgacgatgcctta
aagacattgtcggcgctgaagcaggtcctggtgacccagctcatgttgcaggaggacggc
gaaggcgccggccgctcctcctcgaggggcgggcgtcttctcaggaccacgtccctgagg
acccccgtggacagccgtgcccgggtggctgtgcagaaaggctccgggatgtgcacccag
gccagccaccccgaggaccctgctcaggacctggtgtctggggacacgggtttctttgag
tcccccgaggattatgcagggtacctggtcctggagggctacgggggctcgggggagagc
agcacggacgatgacctccaggccaccgggaagcagctgagcgcctcgcggggctgcggg
gcaggagactctgggatcagcttgaggttctcctctgcctcacaggcaggtagcatctcc
agcttcagccgacaggtcctgtcccacctccgcaacctgcagaccaacctcaaccacctc
aaggaggtagaggccaagtatcacagtctactacgccagaggccggccaggtcatcgaca
gacacggacatcaacaaagataaaagatag
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