Salvelinus fontinalis (brook trout): 129821928
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Entry
129821928 CDS
T11136
Name
(RefSeq) interferon regulatory factor 2-binding protein 1-like
KO
K22383
interferon regulatory factor 2-binding protein
Organism
sfon Salvelinus fontinalis (brook trout)
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sfon03000
]
129821928
04121 Ubiquitin system [BR:
sfon04121
]
129821928
Transcription factors [BR:
sfon03000
]
Eukaryotic type
Zinc finger
Other zinc fingers
129821928
Ubiquitin system [BR:
sfon04121
]
Ubiquitin ligases (E3)
Atypical E3
129821928
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IRF-2BP1_2
zf-C3HC4
Motif
Other DBs
NCBI-GeneID:
129821928
NCBI-ProteinID:
XP_055735652
LinkDB
All DBs
Position
24:complement(12112213..12118046)
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AA seq
631 aa
AA seq
DB search
MSSSQSYSRRQWCCYLCDLPKMPWAMIWDFSETVCRGCVNYEGTDRIEFLIETARQLKIT
HVMQDDRSPCPQPTKHGPGGRDGPMEGGRPLPECFERGRGDYGAPARIPNGLHRIDDGGP
QQELSGQSPINARRPMVCTVPPNLMTQGLVGAPHGLLAAVPGLNARVGGTPLTLSASMLN
EITKRQLSMGMGVASFLSPEFEKELREKQRNAEALAELSESVRNRADDWAGRPKAVRGAL
LTLSGCTPFNVRFKKDHSLVGRIFAFDAKLTLDFELKIFAEYPCGSGNMFSSLAALVKQM
FHDSQRDSGSKVVNSGLKYVEYEKRHGAGDWRLLSELLSDAVRAFKDTPGPDVLPQPYLD
ASCSMLPTALCHMSRSAPPVRGRRRKASPEPQGGEVVTTEEQLRQHWPMGMYPGMAIHLA
ASSFPSASQPPPHQEGSASHSHSSDPSPITALMSVADNAGAAAGQSPREAPSSSSSGGGL
GHSSLAVRQSSSSPMAACPAGQQRRLASRNGEPQGASNSAGGTTAALPLAGASDQGAGDP
SSSSGPPLCCTICHERLEDTHFVQCPSVAAHKFCFPCTRDFIRSRGAGSEVFCPSGEGCP
LVGSNVPWAFMQGEIVTILAGDVKVKKERDP
NT seq
1896 nt
NT seq
+upstream
nt +downstream
nt
atgtcctcctcccagtcatattcaaggcggcagtggtgttgctacctttgcgatttgcct
aagatgccatgggctatgatctgggactttagcgagactgtctgccgaggctgtgtgaat
tatgaaggtacggaccgtattgaattcctcatagagacggcaaggcagttgaaaataact
catgttatgcaggatgacaggtccccgtgtccccagcccactaaacatggcccaggtggg
agagatggacctatggagggtggcaggccacttcctgaatgctttgaaaggggaagaggg
gactacggagccccagcacggatccccaacggtctgcatagaatagatgacgggggccca
caacaagaactcagtggacagagccctatcaacgccagacgacccatggtgtgtaccgtt
ccgcccaatttaatgacacaaggccttgtgggggctccgcacgggttgctagcagctgtg
cccggtttaaatgccagagtcgggggaacccccctcaccctctctgcctccatgctgaac
gagatcaccaagaggcagctgagcatgggcatgggtgtggcctccttcctgagccctgag
tttgagaaggagctgagggagaagcagaggaacgcagaggctctggccgagctgtcggag
agtgtacggaaccgagcagacgactgggccggccgacccaaggctgtacgaggggccctg
ctcaccctctccggctgtacccccttcaacgtgcgcttcaagaaggaccacagcctggtg
ggacggatctttgccttcgatgccaagctgacgctggactttgagctgaagatctttgcg
gagtacccgtgcggctcggggaacatgttctccagcctggcggcgctggtcaagcagatg
ttccacgacagccagagagactctgggagcaaggtggtcaactcgggcctgaagtatgtg
gagtacgagaaaaggcatggcgcgggggactggcgactgctctctgagctgctgagtgat
gcggtacgggcctttaaggacacccccggccctgacgttctcccccagccctacctggac
gccagctgctccatgctgcccacagcgctgtgtcacatgtcccgctcggcaccgccagtc
cgcgggcgccggaggaaggcttccccagagccccagggtggagaggtggtgaccacagag
gagcagctccggcagcattggcccatggggatgtacccgggaatggctatccacctagct
gcctcctccttccccagcgctagccagccacctcctcaccaggagggctcagcctcccat
tcccacagcagcgatccctcccccatcacagcactgatgagcgtggctgacaacgcaggt
gcagccgccggccagtcacccagggaggcccctagcagcagcagtagtggtggaggcctg
ggccactcctccttggcagtgagacagagcagcagcagccccatggcagcgtgccctgcg
gggcagcagcggcgcctggcctccaggaatggggaaccccagggagccagcaactctgca
gggggaaccacagcagctctccctctggctggggcctcggaccagggagcaggggacccc
tccagctcctctggtccccctctctgctgcaccatctgccacgagcgcttggaagacact
cactttgtccagtgcccctcggttgcggcccataagttctgcttcccatgcaccagagac
ttcatccggagccggggggccggcagcgaggtgttctgccccagtggagaggggtgtccc
ctggtaggctccaacgtgccctgggccttcatgcagggagagatcgttaccatcctggct
ggagatgtcaaggtgaagaaggagcgcgacccctaa
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